Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-07

Gene Name Gene ID Reads Annotation
Sep-07 Sep-07 1827










Genes with expression patterns similar to Sep-07

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Sep-07 Sep-07 1827 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. lsm14aa ENSDARG00000006600 2298 2.131 - 0.712 - 0.713 - - 0.706 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
3. dnmt3b dnmt3b 2522 1.653 - 0.894 - - - 0.759 - - -
4. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.632 - 0.885 - - - 0.747 - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
5. st6galnac4 ENSDARG00000100804 583 1.601 - 0.878 - - - - 0.723 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-6]
6. CPEB2 ENSDARG00000052604 2646 1.594 - 0.780 - - - 0.814 - - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
7. ldb1a ENSDARG00000010137 3035 1.593 - 0.814 - - - 0.779 - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
8. arhgef39 ENSDARG00000013476, ENSDARG00000114412 632 1.591 - 0.859 0.732 - - - - - - Rho guanine nucleotide exchange factor (GEF) 39 [Source:ZFIN;Acc:ZDB-GENE-041114-28]
9. tiam1a ENSDARG00000078430 2482 1.565 - 0.768 - - - - 0.797 - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
10. fbln5 ENSDARG00000039273 105 1.556 - 0.764 - - - - 0.792 - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
11. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.554 - 0.767 - - - 0.787 - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
12. WNT7A WNT7A 320 1.544 - 0.771 - - - - 0.773 - -
13. CABZ01062452.1 CABZ01062452.1 1721 1.539 - 0.732 - - - 0.807 - - -
14. C18H16orf70 C18H16orf70 542 1.517 0.725 0.792 - - - - - - -
15. ylpm1 ENSDARG00000043680 7676 1.508 - 0.776 - - - 0.732 - - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
16. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.507 - 0.793 - - - 0.714 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
17. si:dkey-57k17.1 ENSDARG00000104697 442 1.501 - 0.785 - - - - 0.716 - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
18. gsk3ab ENSDARG00000015681 1322 1.496 - - - - - 0.724 0.772 - - glycogen synthase kinase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-990714-3]
19. FRMD4A ENSDARG00000042249 2883 1.495 - 0.775 - - - 0.720 - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
20. bcs1l ENSDARG00000012295 664 1.49 - 0.775 - - - - - 0.715 - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
21. pgam5 ENSDARG00000035608 4044 1.488 - - - - - 0.725 0.763 - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
22. rac2 ENSDARG00000038010 5837 1.484 0.729 0.755 - - - - - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
23. uba1 ENSDARG00000037559 11579 1.482 - 0.775 - - - 0.707 - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
24. zgc:136892 ENSDARG00000069505 365 1.482 - 0.772 - - - - 0.710 - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
25. smad7 ENSDARG00000016858 1660 1.472 - 0.745 - - - 0.727 - - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
26. BX569778.1 BX569778.1 36 1.468 - 0.745 - - - - 0.723 - -
27. zgc:162232 zgc:162232 251 1.466 - 0.755 - - - - 0.711 - -
28. bloc1s1 ENSDARG00000014171 597 1.465 - 0.723 - - - - 0.742 - - biogenesis of lysosomal organelles complex-1, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050208-569]
29. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.464 - 0.751 - - - 0.713 - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
30. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.46 - 0.756 - - - - 0.704 - -
31. CR354611.2 CR354611.2 2040 1.457 - 0.724 - - - 0.733 - - -
32. ccnf ENSDARG00000105046 1790 1.448 - - - - - - 0.726 0.722 - cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
33. BX323793.2 BX323793.2 61 1.447 0.730 - - - - - 0.717 - -
34. CABZ01084007.1 CABZ01084007.1 199 1.443 - - - - - - 0.724 - 0.719
35. psenen ENSDARG00000068698 2777 1.442 - - - 0.717 - - 0.725 - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
36. gnb1b_1 ENSDARG00000104372 3728 1.441 - 0.715 - - - 0.726 - - - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
37. vezf1b ENSDARG00000061030 1410 1.44 - - - - - 0.721 - 0.719 - vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
38. ift172 ENSDARG00000041870 1239 1.429 - - - - - - 0.706 0.723 - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
39. tra2a ENSDARG00000007863 4449 1.427 - - - - - 0.709 0.718 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
40. cndp2 ENSDARG00000003931 1177 1.426 - - - - - 0.702 - 0.724 - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
41. zgc:154093 ENSDARG00000055897 386 1.42 0.704 0.716 - - - - - - - zgc:154093 [Source:ZFIN;Acc:ZDB-GENE-061103-517]
42. CPAMD8 ENSDARG00000056530 3481 0.916 - 0.916 - - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
43. bub1bb ENSDARG00000074927 1667 0.915 - 0.915 - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
44. pnp5a ENSDARG00000078619 1461 0.911 - 0.911 - - - - - - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
45. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.905 - 0.905 - - - - - - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
46. echs1 ENSDARG00000001578 3733 0.905 - 0.905 - - - - - - - enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
47. ZFP36 ZFP36 1677 0.901 - 0.901 - - - - - - -
48. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.901 - 0.901 - - - - - - -
49. FBXO33 ENSDARG00000075400 1164 0.898 - 0.898 - - - - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
50. vdac1 ENSDARG00000045132 8051 0.894 - 0.894 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
51. dlgap4a ENSDARG00000060849 1813 0.89 - 0.890 - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
52. thrap3b ENSDARG00000098228 4396 0.889 - 0.889 - - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
53. lamb4 ENSDARG00000039133 1220 0.886 - 0.886 - - - - - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
54. zgc:113054 ENSDARG00000053483 1079 0.886 - 0.886 - - - - - - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
55. psat1 ENSDARG00000016733 8084 0.883 - 0.883 - - - - - - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
56. wwp2 ENSDARG00000061345 3459 0.88 - 0.880 - - - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
57. b4galt1 ENSDARG00000002634 1076 0.879 - 0.879 - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
58. pvrl1b 1645 0.877 - 0.877 - - - - - - - poliovirus receptor-related 1b
59. irs4a ENSDARG00000086551 346 0.876 - - - - - - 0.876 - - insulin receptor substrate 4a [Source:ZFIN;Acc:ZDB-GENE-120215-92]
60. laptm4a ENSDARG00000006397 1698 0.876 - 0.876 - - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
61. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 0.875 - 0.875 - - - - - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
62. tjp2b ENSDARG00000023443 1654 0.87 - 0.870 - - - - - - - tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]
63. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 0.869 - 0.869 - - - - - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
64. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 0.868 - 0.868 - - - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
65. srpx ENSDARG00000010318 946 0.866 - 0.866 - - - - - - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
66. gtf2h5 ENSDARG00000056099, ENSDARG00000114297 1331 0.863 - 0.863 - - - - - - - general transcription factor IIH, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041001-144]
67. NOTUM NOTUM 232 0.862 - - - - - - 0.862 - -
68. magi3 magi3 962 0.861 - 0.861 - - - - - - -
69. bmper ENSDARG00000101980 668 0.86 - - - - - - 0.860 - - BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
70. dkc1 ENSDARG00000016484 7088 0.859 - - - - - - - 0.859 - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
71. fam212aa 1132 0.858 - - - - - - - 0.858 - family with sequence similarity 212, member Aa, transcript variant X1
72. tab1 ENSDARG00000036613 445 0.858 - 0.858 - - - - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
73. sf3b3_1 ENSDARG00000103553 1191 0.858 - 0.858 - - - - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
74. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 0.857 - 0.857 - - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
75. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 0.857 - 0.857 - - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
76. hoxc11a ENSDARG00000070351 1783 0.853 - 0.853 - - - - - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
77. zgc:162967 zgc:162967 2132 0.853 - 0.853 - - - - - - -
78. si:ch211-10d23.5 ENSDARG00000095510 2632 0.853 - - - - - - 0.853 - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
79. SLC16A13 ENSDARG00000055342 183 0.852 - 0.852 - - - - - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
80. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 0.851 - 0.851 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
81. lipf ENSDARG00000018529 1849 0.851 - 0.851 - - - - - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
82. C11H9orf89 C11H9orf89 477 0.85 - 0.850 - - - - - - -
83. usp1 ENSDARG00000056414 1816 0.85 - 0.850 - - - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
84. pgd ENSDARG00000015343, ENSDARG00000117150 2512 0.849 - 0.849 - - - - - - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
85. evx1 ENSDARG00000099365, ENSDARG00000100087 609 0.849 - - - - - - 0.849 - - even-skipped homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-364]
86. topbp1 ENSDARG00000059322 241 0.848 - - - - - - 0.848 - - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
87. ywhae2 ENSDARG00000017014 5105 0.848 - 0.848 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
88. AL844567.1 AL844567.1 1605 0.848 - 0.848 - - - - - - -
89. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 0.847 - 0.847 - - - - - - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
90. ppp1r13l ENSDARG00000013777 2260 0.847 - 0.847 - - - - - - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
91. h1fx ENSDARG00000054058 4075 0.847 - 0.847 - - - - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
92. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 0.846 - - - - - 0.846 - - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
93. immt ENSDARG00000102874 3435 0.846 - 0.846 - - - - - - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
94. smg1 ENSDARG00000054570, ENSDARG00000116568 1271 0.843 - 0.843 - - - - - - - SMG1 phosphatidylinositol 3-kinase-related kinase [Source:ZFIN;Acc:ZDB-GENE-061013-767]
95. trmt44 ENSDARG00000033957 133 0.841 - - - - - - 0.841 - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
96. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.841 - 0.841 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
97. polr2a ENSDARG00000099966 5706 0.84 - 0.840 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
98. C8H22orf39 C8H22orf39 1236 0.839 - 0.839 - - - - - - -
99. MTHFS ENSDARG00000104487 770 0.838 - 0.838 - - - - - - - 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:ZFIN;Acc:ZDB-GENE-130103-5]
100. chchd1 ENSDARG00000029100 2121 0.836 - 0.836 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]

There are 988 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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