Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-06

Gene Name Gene ID Reads Annotation
Sep-06 Sep-06 5961











Genes with expression patterns similar to Sep-06

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-06 Sep-06 5961 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. C9orf64 ENSGALG00000012589 6097 1.812 - - - - - - 0.999 0.813 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
3. LRPAP1 ENSGALG00000015612 3526 1.712 - - - - - - 0.999 0.713 - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
4. FAM192A ENSGALG00000021473 10213 1 - - - - - - 1.000 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
5. USPL1 ENSGALG00000017079 6263 0.999 - - - - - - 0.999 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
6. VSX1 ENSGALG00000037576 1517 0.999 - - - - - - 0.999 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
7. EIF1B ENSGALG00000038646 9508 0.999 - - - - - - 0.999 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
8. WDHD1 ENSGALG00000012199 3570 0.999 - - - - - - 0.999 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
9. CORO1C ENSGALG00000004901 7055 0.999 - - - - - - 0.999 - - - coronin 1C [Source:NCBI gene;Acc:416893]
10. FAT1 ENSGALG00000013579 6030 0.999 - - - - - - 0.999 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
11. ARHGAP32 ENSGALG00000043511 7916 0.998 - - - - - - 0.998 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
12. ZEB1 ENSGALG00000007260 9277 0.998 - - - - - - 0.998 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
13. RNF141 ENSGALG00000029586 4962 0.998 - - - - - - 0.998 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
14. MCM3 ENSGALG00000016676 16934 0.998 - - - - - - 0.998 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
15. CCNYL1 ENSGALG00000008485 11958 0.997 - - - - - - 0.997 - - - cyclin Y like 1
16. HDAC8 ENSGALG00000004825 12066 0.997 - - - - - - 0.997 - - - histone deacetylase 8, transcript variant X2
17. GPC1 ENSGALG00000040316 13364 0.997 - - - - - - 0.997 - - - glypican 1 [Source:NCBI gene;Acc:424770]
18. DAPK3 ENSGALG00000037733 6215 0.997 - - - - - - 0.997 - - - death-associated protein kinase 3, transcript variant X2
19. RAB12 ENSGALG00000033608 14160 0.997 - - - - - - 0.997 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
20. MATR3 ENSGALG00000002478 12793 0.997 - - - - - - 0.997 - - - matrin 3 [Source:NCBI gene;Acc:373948]
21. MCM6 ENSGALG00000012348 12523 0.996 - - - - - - 0.996 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
22. C15H12ORF49 C15H12ORF49 13250 0.996 - - - - - - 0.996 - - -
23. CNOT6 ENSGALG00000034316 10496 0.996 - - - - - - 0.996 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
24. EFTUD2 ENSGALG00000000988 17913 0.996 - - - - - - 0.996 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
25. CXCL12 ENSGALG00000041346 4128 0.996 - - - - - - 0.996 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
26. EIF3D ENSGALG00000012529 40887 0.995 - - - - - - 0.995 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
27. DNAJC7 ENSGALG00000042796 14597 0.994 - - - - - - 0.994 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
28. CTBPL ENSGALG00000007642 14238 0.994 - - - - - - 0.994 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
29. TMEM18 ENSGALG00000028744 11779 0.993 - - - - - - 0.993 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
30. SLC9A3R1 ENSGALG00000007650 13053 0.993 - - - - - - 0.993 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
31. INTS4 ENSGALG00000000091 5965 0.991 - - - - - - 0.991 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
32. IFT20 ENSGALG00000005707 23973 0.989 - - - - - - 0.989 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
33. RAP1B ENSGALG00000009927 26562 0.987 - - - - - - 0.987 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
34. UBE2L3 ENSGALG00000036739 21401 0.987 - - - - - - 0.987 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
35. DHFR ENSGALG00000026757 18478 0.987 - - - - - - 0.987 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
36. PDLIM4 ENSGALG00000039872 7823 0.986 - - - - - - 0.986 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
37. PPIG ENSGALG00000009839 24114 0.984 - - - - - - 0.984 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
38. LRPPRC ENSGALG00000009967 17091 0.984 - - - - - - 0.984 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
39. HNRNPH3 ENSGALG00000003947 28724 0.982 - - - - - - 0.982 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
40. CDCA4 ENSGALG00000011692 10381 0.982 - - - - - - 0.982 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
41. ZNF644 ENSGALG00000034253 28348 0.982 - - - - - - 0.982 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
42. SMARCE1 ENSGALG00000003882 49063 0.97 - - - - - - 0.970 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
43. HNRNPM ENSGALG00000000377 40684 0.95 - - - - - - 0.950 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
44. CKLF ENSGALG00000005254 3365 0.891 - - - - - - - 0.891 - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
45. RER1 ENSGALG00000021683 9074 0.872 - - - - - - - 0.872 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
46. LIMS1 ENSGALG00000029970 7244 0.859 - - - - - - - 0.859 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
47. GTPBP4 ENSGALG00000006703 16183 0.858 - - - - - - - 0.858 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
48. TRAPPC3 ENSGALG00000002284 23302 0.846 - - - - - - - 0.846 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
49. MED27 ENSGALG00000003683 6808 0.842 - - - - - - - 0.842 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
50. PDE3B ENSGALG00000006035 3732 0.84 - - - - - - - 0.840 - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
51. TAF5 ENSGALG00000008241 5227 0.836 - - - - - - - 0.836 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
52. PTTG1 17936 0.832 - - - - - - - 0.832 - - pituitary tumor-transforming 1, transcript variant X1
53. WRB ENSGALG00000016070 5199 0.83 - - - - - - - 0.830 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
54. CUX1_1 ENSGALG00000021636 3705 0.83 - - - - - - - 0.830 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
55. AP2M1 ENSGALG00000008432 16249 0.825 - - - - - - - 0.825 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
56. STOML2 STOML2 15566 0.824 - - - - - - - 0.824 - -
57. PPID ENSGALG00000009451 7529 0.822 - - - - - - - 0.822 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
58. PCNA ENSGALG00000029292 19163 0.82 - - - - - - - 0.820 - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
59. SEC63 ENSGALG00000015308 11596 0.819 - - - - - - - 0.819 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
60. ZSWIM7 ENSGALG00000023686 6459 0.819 - - - - - - - 0.819 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
61. GPALPP1 ENSGALG00000031567 4221 0.818 - - - - - - - 0.818 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
62. IBTK ENSGALG00000015864 3154 0.818 - - - - - - - 0.818 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
63. ATP6V0A2 ENSGALG00000003194 4824 0.815 - - - - - - - 0.815 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
64. LUM ENSGALG00000011271 44020 0.813 - - - - - - 0.813 - - - lumican [Source:NCBI gene;Acc:417891]
65. BIVM ENSGALG00000016861 3987 0.811 - - - - - - - 0.811 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
66. RBM12B ENSGALG00000035129 4314 0.811 - - - - - - - 0.811 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
67. TBC1D7 ENSGALG00000012731 4891 0.811 - - - - - - - 0.811 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
68. CREPT CREPT 17142 0.811 - - - - - - - 0.811 - -
69. PITX1 ENSGALG00000030237 842 0.81 - - - - - - - 0.810 - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
70. GLT8D1 ENSGALG00000001642 4232 0.805 - - - - - - - 0.805 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
71. RPN1 ENSGALG00000005907 25315 0.805 - - - - - - - 0.805 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
72. MCM4 ENSGALG00000012915 13151 0.801 - - - - - - - 0.801 - - minichromosome maintenance complex component 4
73. LOC112529965 ENSGALG00000010758 5395 0.801 - - - - - - - 0.801 - - NADH-cytochrome b5 reductase-like
74. PRPF40A ENSGALG00000012526 7724 0.797 - - - - - - - 0.797 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
75. CAP1 ENSGALG00000036294 18598 0.794 - - - - - - - 0.794 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
76. SUB1 ENSGALG00000003248 56412 0.794 - - - - - - 0.794 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
77. NUP50 ENSGALG00000014222 11743 0.792 - - - - - - - 0.792 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
78. NBEA 1982 0.791 - - - - - - - 0.791 - - neurobeachin, transcript variant X10
79. IREB2 ENSGALG00000035462 10659 0.79 - - - - - - - 0.790 - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
80. GPD1L ENSGALG00000011481 4224 0.787 - - - - - - - 0.787 - - glycerol-3-phosphate dehydrogenase 1 like [Source:HGNC Symbol;Acc:HGNC:28956]
81. TERF1 ENSGALG00000037453 4497 0.786 - - - - - - - 0.786 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
82. PTPRK ENSGALG00000037423 3688 0.785 - - - - - - - 0.785 - - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
83. GAS2 ENSGALG00000003655 2672 0.785 - - - - - - - 0.785 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
84. FBXL17 ENSGALG00000000276 2443 0.784 - - - - - - - 0.784 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
85. IRAK1BP1 ENSGALG00000015892 2236 0.783 - - - - - - - 0.783 - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
86. RCAN3 ENSGALG00000004282 7778 0.782 - - - - - - - 0.782 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
87. RNF185 ENSGALG00000006960 5428 0.78 - - - - - - - 0.780 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
88. AIP ENSGALG00000040247 4166 0.779 - - - - - - - 0.779 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
89. RPL3 ENSGALG00000012172 118287 0.778 - - - - - - 0.778 - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
90. MTMR8 ENSGALG00000007590 6022 0.776 - - - - - - - 0.776 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
91. ASNSD1 ENSGALG00000041666 3757 0.776 - - - - - - - 0.776 - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
92. UTP3 ENSGALG00000011553 8814 0.775 - - - - - - - 0.775 - - UTP3, small subunit processome component homolog (S. cerevisiae)
93. CLMP ENSGALG00000006507 8079 0.774 - - - - - - - 0.774 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
94. PARN ENSGALG00000003091 6363 0.773 - - - - - - - 0.773 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
95. CYB5R2 ENSGALG00000032372 7967 0.773 - - - - - - - 0.773 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
96. ANAPC16 ENSGALG00000004410 18001 0.772 - - - - - - - 0.772 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
97. SLC39A9 ENSGALG00000009438 4838 0.772 - - - - - - - 0.772 - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
98. PDDC1 5179 0.769 - - - - - - - 0.769 - - Parkinson disease 7 domain containing 1, transcript variant X6
99. UPF1 ENSGALG00000003220 9496 0.769 - - - - - - - 0.769 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
100. RELL1 ENSGALG00000014336 2950 0.764 - - - - - - - 0.764 - - RELT like 1 [Source:NCBI gene;Acc:422795]

There are 67 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA