Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-06

Gene Name Gene ID Reads Annotation
Sep-06 Sep-06 5465










Genes with expression patterns similar to Sep-06

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Sep-06 Sep-06 5465 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. hmgb3a ENSDARG00000056725 15668 3.101 - 0.766 - - - - 0.729 0.904 0.702 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
3. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 3.062 - 0.825 - - - - 0.761 0.703 0.773 ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
4. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 3.062 0.728 0.745 - - - - 0.848 - 0.741 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
5. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.67 - 0.778 - - - 0.991 0.901 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
6. farsa ENSDARG00000098825 2813 2.655 - 0.756 - - - 0.993 - 0.906 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
7. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 2.594 - - - - - 0.989 - 0.882 0.723 M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
8. tuba1b ENSDARG00000045367 8485 2.561 - 0.781 - - - 0.991 0.789 - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
9. MRPL52 ENSDARG00000090568 4402 2.554 0.747 0.814 - - - 0.993 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
10. max ENSDARG00000024844 6035 2.532 - - - - - - 0.789 0.914 0.829 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
11. isoc2 ENSDARG00000013371 1378 2.512 - 0.737 - - - - 0.815 0.960 - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
12. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.505 - 0.758 - - - 0.992 0.755 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
13. lpl ENSDARG00000087697 2578 2.498 0.732 0.833 - - - - - 0.933 - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
14. psmb7 ENSDARG00000037962 11542 2.478 - - - - - 0.992 0.768 - 0.718 proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
15. top2a ENSDARG00000024488 4273 2.474 - - - - - - 0.761 0.947 0.766 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
16. hadhb ENSDARG00000102055 9700 2.447 - 0.708 - - - 0.966 0.773 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
17. puf60a ENSDARG00000032175 5618 2.442 - 0.813 - - - - 0.868 - 0.761 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
18. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 2.439 - 0.704 - - - 0.994 0.741 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
19. myef2 ENSDARG00000059398 6050 2.424 - - - - - - 0.772 0.892 0.760 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
20. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 2.421 - 0.745 - - - - - 0.955 0.721 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
21. foxp1b ENSDARG00000014181 2594 2.415 - - - - - - 0.769 0.932 0.714 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
22. GATAD2B ENSDARG00000005834 3855 2.399 - - - - - - 0.704 0.925 0.770 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
23. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 2.383 - - - - - - 0.771 0.872 0.740 phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
24. SNRPG ENSDARG00000099667 18697 2.382 - 0.802 - - - - 0.815 - 0.765 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
25. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 2.37 - 0.802 - - - - - 0.866 0.702 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
26. lypla2 ENSDARG00000053656 8971 2.347 - 0.730 - - - - 0.879 - 0.738 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
27. rbmx ENSDARG00000014244 3445 2.345 - 0.808 - - - - 0.757 - 0.780 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
28. eif4h ENSDARG00000042252 6742 2.341 - 0.815 - - - - 0.756 - 0.770 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
29. hmgb2b ENSDARG00000053990 11519 2.34 - 0.806 - - - - 0.772 - 0.762 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
30. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.334 0.749 - - - - - 0.808 - 0.777 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
31. smek1 ENSDARG00000042187 3509 2.332 - 0.734 - - - - 0.878 - 0.720 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
32. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 2.296 - 0.767 - - - - 0.782 - 0.747 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
33. lbr ENSDARG00000014013 4835 2.293 0.783 - - - - - 0.769 - 0.741 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
34. dnaja2l ENSDARG00000010745 2367 2.267 - 0.718 - - - - - 0.839 0.710 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
35. meaf6 ENSDARG00000101216 6865 2.247 - 0.741 - - 0.701 - 0.805 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
36. smarca5 ENSDARG00000052348 15433 2.24 - 0.780 - - - - 0.736 - 0.724 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
37. nop58 ENSDARG00000104353 8497 2.23 - 0.734 - - - - 0.786 - 0.710 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
38. CARKD 1398 2.222 0.700 - - - - - 0.780 - 0.742 carbohydrate kinase domain containing, transcript variant X7
39. g3bp1 ENSDARG00000017741 7622 2.213 - 0.723 - - - - 0.745 - 0.745 GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
40. sf1 ENSDARG00000008188 5142 2.187 - 0.700 - - - - 0.768 - 0.719 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
41. tacc3 ENSDARG00000005454 2305 2.171 - 0.702 - - - - 0.738 - 0.731 transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
42. eif3m ENSDARG00000013931 8117 2.143 - 0.703 - - - - 0.727 0.713 - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
43. ube2z ENSDARG00000029215 1059 1.933 - - - - - 0.993 - 0.940 - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
44. pafah1b1a ENSDARG00000032013 3183 1.854 - - - - - 0.991 - 0.863 - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
45. timm8b ENSDARG00000055708 7291 1.834 - 0.854 - - - 0.980 - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
46. acin1a ENSDARG00000054290 14023 1.806 - - - - - 0.969 0.837 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
47. CCDC86 CCDC86 2023 1.789 - 0.793 - - - 0.996 - - -
48. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.788 - - - - - 0.921 - 0.867 - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
49. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.787 - - - - - 0.965 - 0.822 - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
50. acvr1b acvr1b 2963 1.776 - - - - - 0.995 - - 0.781
51. slc25a12 ENSDARG00000102362 2773 1.774 - 0.782 - - - 0.992 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
52. ift46 ENSDARG00000011240 2499 1.773 - - - - - - 0.808 0.965 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
53. zgc:162356 zgc:162356 5115 1.768 - 0.789 - - - 0.979 - - -
54. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.765 - 0.772 - - - 0.993 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
55. HOMER2 ENSDARG00000059349 2264 1.762 - 0.771 - - - 0.991 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
56. TMPO TMPO 3264 1.761 - 0.777 - - - 0.984 - - -
57. dctn3 ENSDARG00000041363 3351 1.76 - - - - - 0.991 0.769 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
58. boc ENSDARG00000074335 4832 1.76 - - - - - - 0.878 0.882 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
59. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.756 - 0.764 - - - 0.992 - - -
60. ube2i ube2i 13024 1.755 - - - - - - 0.853 0.902 -
61. prmt1 ENSDARG00000010246 11311 1.747 - 0.929 - - - - 0.818 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
62. hbae1_1 37308 1.745 - 0.847 - - - 0.898 - - - hemoglobin, alpha embryonic 1
63. slc4a1a ENSDARG00000012881 8972 1.741 - 0.752 - - - 0.989 - - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
64. arih2 ENSDARG00000012848 7087 1.739 - - - - - - 0.786 0.953 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
65. impdh1b ENSDARG00000029524 7472 1.734 - 0.822 - - - - - 0.912 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
66. pinx1 ENSDARG00000023532 4452 1.734 - 0.781 - - - - - 0.953 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
67. atf4b2 atf4b2 4734 1.729 - - - - - - 0.780 0.949 -
68. hapln1a ENSDARG00000089769 12334 1.726 - 0.782 - - - 0.944 - - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
69. casc4 ENSDARG00000074490 2019 1.72 - 0.796 - - - - - 0.924 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
70. cbsa ENSDARG00000053500, ENSDARG00000112676 792 1.72 - 0.727 - - - 0.993 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
71. pcif1 ENSDARG00000099084 2851 1.719 - - - - - - - 0.959 0.760 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
72. maf1 ENSDARG00000013122 3365 1.718 - - - - - - 0.813 0.905 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
73. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 1.715 - 0.721 - - - 0.994 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
74. pcyt1aa ENSDARG00000011233 1985 1.714 - 0.823 - - - - - 0.891 - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
75. emp2 ENSDARG00000044588 12560 1.711 - - - - - 0.965 0.746 - - epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
76. dido1 ENSDARG00000057940 3819 1.711 - - - - - - 0.766 0.945 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
77. AP3B2 1874 1.711 - - - - - - - 0.958 0.753 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
78. LDLRAD4 LDLRAD4 1237 1.709 - - - - - - - 0.957 0.752
79. PCBP4 ENSDARG00000024276 3194 1.708 - - - - - 0.993 - - 0.715 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
80. si:dkey-118j18.2 ENSDARG00000096457 5293 1.708 - 0.721 - - - 0.987 - - - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
81. pcdh10b ENSDARG00000102824 732 1.707 - - - - - - - 0.963 0.744 protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
82. MYOM1 MYOM1 3870 1.704 - 0.732 - - - 0.972 - - -
83. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.704 - - - - - - - 0.959 0.745 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
84. ppm1g ENSDARG00000075559 6516 1.703 - 0.838 - - - - - 0.865 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
85. srl ENSDARG00000104587 11126 1.703 - 0.736 - - - 0.967 - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
86. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.702 - - - - - - 0.802 0.900 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
87. gna11b ENSDARG00000053326 5118 1.698 - - - - - - 0.889 0.809 - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
88. gipc1 ENSDARG00000104483 2913 1.698 - 0.749 - - - - - 0.949 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
89. c1d ENSDARG00000021112 2839 1.695 - - - - - - - 0.935 0.760 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
90. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.695 - - - - - - - 0.936 0.759 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
91. rab43 ENSDARG00000059404 1118 1.694 - 0.724 - - - - - 0.970 - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
92. prx ENSDARG00000017246 6183 1.692 - 0.713 - - - 0.979 - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
93. dennd5a ENSDARG00000017006 3426 1.69 - 0.733 - - - - - 0.957 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
94. MKI67 ENSDARG00000091150 11038 1.689 - - - - - - 0.838 0.851 - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
95. grpel2 ENSDARG00000069421 5673 1.686 - 0.825 - - - 0.861 - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
96. eef2l2 ENSDARG00000035256 6815 1.684 - 0.758 - - - 0.926 - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
97. psma2 ENSDARG00000040121 2504 1.681 - - - - - - 0.757 0.924 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
98. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.68 - 0.800 - - - - - 0.880 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
99. nucks1b ENSDARG00000012777 4468 1.68 - - - - - - 0.754 0.926 - nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
100. pgam5 ENSDARG00000035608 4044 1.68 - - - - - - 0.770 0.910 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]

There are 2010 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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