Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-03

Gene Name Gene ID Reads Annotation
Sep-03 Sep-03 109











Genes with expression patterns similar to Sep-03

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-03 Sep-03 109 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000
2. TMEM201 ENSGALG00000002527 2 1.866 - - - 0.871 - 0.995 - - - - transmembrane protein 201
3. PROKR2 ENSGALG00000008741 72 1.639 - - - - - 0.893 - - - 0.746 prokineticin receptor 2 [Source:NCBI gene;Acc:421263]
4. NSG1 ENSGALG00000015010 5829 1.577 - - - - - 0.735 - - - 0.842 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
5. CXCR4 ENSGALG00000012357 1320 1.528 - - - - - 0.782 - - - 0.746 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
6. PLPPR1 ENSGALG00000015542 3179 1.51 - - - - - 0.713 - - - 0.797 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
7. DENND5B 4077 1.506 - - - - - 0.708 - - - 0.798 DENN domain containing 5B, transcript variant X1
8. MYT1L ENSGALG00000016384 147 1.495 - - - - - 0.708 - - - 0.787 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
9. MAP2 ENSGALG00000002789 6597 1.473 - - - - - 0.707 - - - 0.766 microtubule associated protein 2, transcript variant X33
10. CYP3A4 ENSGALG00000004436 75 1 - - - - - - 1.000 - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
11. ENSGALG00000020320 ENSGALG00000020320 1 0.995 - - - - - 0.995 - - - -
12. ENSGALG00000006495 ENSGALG00000006495 4 0.995 - - - - - 0.995 - - - -
13. KCNQ3 ENSGALG00000037626 6 0.995 - - - - - 0.995 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
14. OLIG3 ENSGALG00000013862 51 0.995 - - - - - 0.995 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
15. BCMO1 BCMO1 35 0.995 - - - - - 0.995 - - - -
16. ABI3BP ENSGALG00000015307 4 0.995 - - - - - 0.995 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
17. PEX26 ENSGALG00000019286 1 0.995 - - - - - 0.995 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
18. CREB3 ENSGALG00000002523 23 0.995 - - - - - 0.995 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
19. VTG1 ENSGALG00000039354 17 0.995 - - - - - 0.995 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
20. ENSGALG00000025912 ENSGALG00000025912 4 0.995 - - - - - 0.995 - - - -
21. ITGAV ENSGALG00000002655 26 0.995 - - - - - 0.995 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
22. SLC38A7 ENSGALG00000002313 25 0.995 - - - - - 0.995 - - - - solute carrier family 38 member 7, transcript variant X5
23. BAP1 ENSGALG00000004366 12 0.995 - - - - - 0.995 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
24. RAB4A ENSGALG00000036218 20 0.995 - - - - - 0.995 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
25. ANKFN1 ENSGALG00000003105 15 0.995 - - - - - 0.995 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
26. DPF3 ENSGALG00000009352 7 0.995 - - - - - 0.995 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
27. VWA3B ENSGALG00000040709 5 0.995 - - - - - 0.995 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
28. WNT3 ENSGALG00000001079 8 0.995 - - - - - 0.995 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
29. INHBB ENSGALG00000028770 2 0.995 - - - - - 0.995 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
30. CLDN19 ENSGALG00000023580 1 0.995 - - - - - 0.995 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
31. SRPX2 ENSGALG00000006796 32 0.995 - - - - - 0.995 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
32. SHANK2 ENSGALG00000035916 9 0.995 - - - - - 0.995 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
33. TRAF1 ENSGALG00000001583 3 0.995 - - - - - 0.995 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
34. ACPP ENSGALG00000043415 4 0.995 - - - - - 0.995 - - - - acid phosphatase, prostate, transcript variant X2
35. ENSGALG00000024369 ENSGALG00000024369 4 0.995 - - - - - 0.995 - - - -
36. SMIM10 SMIM10 2 0.995 - - - - - 0.995 - - - -
37. TMEM181 ENSGALG00000013737 19 0.995 - - - - - 0.995 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
38. MAPK10 ENSGALG00000011109 16 0.985 - - - - - 0.985 - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
39. UNCX ENSGALG00000039292 165 0.976 - - - - - 0.976 - - - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
40. SCG5 ENSGALG00000009725 10 0.973 - - - - - 0.973 - - - - secretogranin V [Source:NCBI gene;Acc:769742]
41. SNORA74 SNORA74 8 0.969 - - - - - 0.969 - - - -
42. STYK1 ENSGALG00000014759 3 0.969 - - - - - 0.969 - - - - serine/threonine/tyrosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:18889]
43. FHAD1 ENSGALG00000034761 3 0.962 - - - - - 0.962 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
44. PCDH8 ENSGALG00000036258 1945 0.958 - - - - - 0.958 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
45. CCDC6 ENSGALG00000003165 93 0.952 - - - - - 0.952 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
46. ITGA6 ENSGALG00000034007 53 0.947 - - - - - 0.947 - - - - integrin subunit alpha 6 [Source:NCBI gene;Acc:396226]
47. PSEN1 ENSGALG00000009320 15 0.944 - - - - - 0.944 - - - - presenilin 1 [Source:NCBI gene;Acc:373977]
48. ENSGALG00000026584 ENSGALG00000026584 77 0.943 - - - - - 0.943 - - - -
49. TCTE1 ENSGALG00000010165 65 0.934 - - - - - 0.934 - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
50. DACH2 ENSGALG00000006886 426 0.933 - - - - - 0.933 - - - - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]
51. ADPRHL1 ENSGALG00000016826 133 0.93 - - - - - - 0.930 - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
52. MAK ENSGALG00000012770 32 0.924 - - - - - 0.924 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
53. PLCH2 ENSGALG00000001207 7 0.924 - - - - - 0.924 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
54. DCLRE1B ENSGALG00000028626 48 0.911 - - - - - 0.911 - - - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
55. FAM81A ENSGALG00000004103 8 0.907 - - - - - 0.907 - - - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
56. STMN2 ENSGALG00000039690 989 0.901 - - - - - - - - - 0.901 stathmin 2 [Source:NCBI gene;Acc:396095]
57. SDR42E2 ENSGALG00000006964 57 0.898 - - - - - 0.898 - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
58. LRRC1 ENSGALG00000016304 21 0.897 - - - - - 0.897 - - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
59. CLEC18B ENSGALG00000027183 284 0.895 - - - - - 0.895 - - - - C-type lectin domain family 18 member B, transcript variant X2
60. MSX2 ENSGALG00000038848 6950 0.893 - - - - - 0.893 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
61. NEFL ENSGALG00000000314 4883 0.891 - - - - - - - - - 0.891 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
62. OXR1 44 0.886 - - - - - 0.886 - - - - oxidation resistance 1, transcript variant X7
63. GDF10 ENSGALG00000005985 11 0.877 - - - - - 0.877 - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
64. DNAJC6 ENSGALG00000011041 4 0.876 - - - - - 0.876 - - - - DnaJ heat shock protein family (Hsp40) member C6 [Source:NCBI gene;Acc:424698]
65. MLNR ENSGALG00000017003 10 0.876 - - - - - 0.876 - - - - motilin receptor [Source:NCBI gene;Acc:428072]
66. ENSGALG00000026351 ENSGALG00000026351 49 0.873 - - - - - 0.873 - - - -
67. SNORA50 SNORA50 9 0.871 - - - 0.871 - - - - - -
68. TBC1D24L ENSGALG00000001244 2 0.871 - - - 0.871 - - - - - - TBC1 domain family member 24-like, transcript variant X2
69. NMBR ENSGALG00000013813 15 0.871 - - - 0.871 - - - - - - neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
70. gga-mir-6544 ENSGALG00000027916 19 0.871 - - - 0.871 - - - - - - gga-mir-6544 [Source:miRBase;Acc:MI0022360]
71. CCDC28A ENSGALG00000013834 8 0.871 - - - 0.871 - - - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
72. TLR7 ENSGALG00000016590 6 0.871 - - - 0.871 - - - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
73. FAM151B ENSGALG00000015577 11 0.871 - - - 0.871 - - - - - - family with sequence similarity 151 member B
74. gga-mir-6659 ENSGALG00000028216 6 0.871 - - - 0.871 - - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
75. PLSCR5 ENSGALG00000006807 9 0.871 - - - 0.871 - - - - - - phospholipid scramblase family member 5 [Source:HGNC Symbol;Acc:HGNC:19952]
76. RTN1 ENSGALG00000012006 2438 0.869 - - - - - - - - - 0.869 reticulon 1 [Source:NCBI gene;Acc:378791]
77. NEFM ENSGALG00000000317 6992 0.865 - - - - - - - - - 0.865 neurofilament medium [Source:NCBI gene;Acc:396206]
78. KCNK2 ENSGALG00000009687 1552 0.862 - - - - - - - - - 0.862 potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
79. TCEANC2 ENSGALG00000010749 162 0.861 - - - - - 0.861 - - - - transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
80. VSTM4 ENSGALG00000006174 98 0.86 - - - - - 0.860 - - - - V-set and transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26470]
81. ATRNL1 ENSGALG00000009152 646 0.858 - - - - - 0.858 - - - - attractin like 1 [Source:HGNC Symbol;Acc:HGNC:29063]
82. FMO3 ENSGALG00000040573 26 0.856 - - - - - - 0.856 - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
83. SAMD11 ENSGALG00000034453 43 0.855 - - - - - 0.855 - - - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
84. SLC7A11 ENSGALG00000009758 104 0.852 - - - - - 0.852 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
85. SIAT8C SIAT8C 178 0.852 - - - - - - - - - 0.852
86. SLC10A4 ENSGALG00000033908 300 0.849 - - - - - - - - - 0.849 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
87. EF1A EF1A 2378 0.848 - - - - - - - - - 0.848
88. ENSGALG00000016494 ENSGALG00000016494 1 0.847 - - - 0.847 - - - - - -
89. OPRL1 ENSGALG00000027965 53 0.847 - - - - - 0.847 - - - - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
90. GRM3 ENSGALG00000006576 474 0.843 - - - - - - - - - 0.843 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
91. GPR98 GPR98 22 0.841 - - - - - 0.841 - - - -
92. ENSGALG00000013985 ENSGALG00000013985 11 0.841 - - - - - 0.841 - - - -
93. CEP250_1 ENSGALG00000026151 23 0.841 - - - - - 0.841 - - - - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
94. HMP19 ENSGALG00000028602 1604 0.841 - - - - - - - - - 0.841 Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
95. SNORA32 SNORA32 1 0.841 - - - - - 0.841 - - - -
96. ZHX3 ENSGALG00000039155 5 0.84 - - - 0.840 - - - - - - zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
97. ADAM22 ENSGALG00000008976 57 0.84 - - - - - - 0.840 - - - ADAM metallopeptidase domain 22 [Source:HGNC Symbol;Acc:HGNC:201]
98. MAP1B ENSGALG00000014999 6288 0.839 - - - - - - - - - 0.839 microtubule associated protein 1B
99. SNAP91 ENSGALG00000015846 148 0.839 - - - - - - - - - 0.839 synaptosome associated protein 91 [Source:NCBI gene;Acc:428635]
100. ZFP64 ENSGALG00000038858 177 0.838 - - - - - 0.838 - - - - ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]

There are 156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA