Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-03

Gene Name Gene ID Reads Annotation
Sep-03 Sep-03 1124










Genes with expression patterns similar to Sep-03

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. Sep-03 Sep-03 1124 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. fzd3a ENSDARG00000021664 1958 4.731 0.783 - 0.766 - - 0.827 0.782 0.818 0.755 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
3. dpysl5a ENSDARG00000011141 1827 4.257 - - 0.836 - 0.780 0.952 0.823 - 0.866 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
4. mllt11 ENSDARG00000071026 2518 4.23 0.772 0.844 - - - 0.946 0.887 - 0.781 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
5. aplp1 ENSDARG00000098368 2317 4.173 0.702 0.938 - - - 0.868 - 0.864 0.801 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
6. gap43 ENSDARG00000099744 4114 4.154 0.737 0.760 - - - 0.948 0.844 - 0.865 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
7. nbeaa ENSDARG00000070080 862 4.081 0.715 0.785 - - - 0.912 0.828 - 0.841 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
8. hmgb3a ENSDARG00000056725 15668 3.992 0.721 - - - - 0.859 0.796 0.838 0.778 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.972 0.776 - 0.727 - - 0.866 0.820 - 0.783 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. ptprna ENSDARG00000058646 1327 3.946 - - 0.827 - 0.756 0.817 0.815 - 0.731 protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
11. AGO1 ENSDARG00000092644 4521 3.894 0.762 - 0.789 - - 0.816 0.815 - 0.712 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
12. tuba1c ENSDARG00000055216 8384 3.546 0.836 - - - - 0.967 0.891 - 0.852 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
13. snap25a ENSDARG00000020609 4537 3.493 0.808 0.870 - - - 0.954 0.861 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
14. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.484 0.789 0.967 - - - 0.939 0.789 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
15. epha4b ENSDARG00000011600 3110 3.483 0.810 - - 0.833 - 0.922 0.918 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
16. nrarpb ENSDARG00000018958 6225 3.476 0.842 - - - - 0.935 0.890 - 0.809 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
17. TUBB8P7_1 TUBB8P7_1 2722 3.469 0.745 0.852 - - - 0.956 0.916 - -
18. BX957337.1 BX957337.1 1685 3.452 0.836 - - - - 0.900 0.873 0.843 -
19. dpysl3 ENSDARG00000002587 4381 3.439 0.814 - - - - 0.938 0.884 - 0.803 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
20. nadl1.1 1200 3.422 - - - - - 0.921 0.926 0.797 0.778 neural adhesion molecule L1.1, transcript variant X1
21. nova2 ENSDARG00000017673 7685 3.41 0.863 0.760 - - - 0.896 0.891 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
22. hmp19 2554 3.406 0.801 - - - - 0.918 0.900 - 0.787 HMP19 protein
23. cspg5a ENSDARG00000069981 1699 3.388 - 0.862 0.813 - - 0.807 0.906 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
24. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.388 0.885 - - - - - 0.927 0.784 0.792 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
25. stx1b ENSDARG00000000503 2724 3.375 0.791 - - - - 0.918 0.848 0.818 - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
26. si:ch73-21g5.7 ENSDARG00000093156 9412 3.369 0.799 - 0.856 - - 0.829 0.885 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
27. nes ENSDARG00000088805 2710 3.366 0.834 - - - 0.771 0.849 0.912 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
28. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.359 0.865 - - - - 0.937 0.848 0.709 - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
29. atp6v0cb ENSDARG00000036577 3472 3.352 0.769 - - - - 0.916 0.890 - 0.777 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
30. slc1a2b ENSDARG00000102453 3136 3.343 0.786 - - - - 0.978 0.770 0.809 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
31. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.34 - 0.863 - - - 0.908 0.771 - 0.798 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
32. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.329 0.796 - 0.771 - - 0.901 0.861 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
33. eno2 ENSDARG00000014287 2162 3.322 0.808 0.751 - - - 0.850 0.913 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
34. slc6a1b ENSDARG00000039647 1301 3.314 0.854 - - - - 0.732 0.902 0.826 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
35. rap2ip rap2ip 681 3.314 0.800 - - - - 0.866 0.903 - 0.745
36. scrt1a ENSDARG00000100821 2687 3.31 0.801 0.791 0.788 - - 0.930 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
37. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 3.3 0.769 0.864 - - - 0.866 0.801 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
38. tmem35 ENSDARG00000052567 5685 3.297 0.805 - - - - 0.784 0.912 - 0.796 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
39. cadm3 ENSDARG00000057013 1545 3.296 - - - - - 0.962 0.782 0.791 0.761 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
40. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.295 - - - - - 0.774 0.938 0.752 0.831 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
41. tox ENSDARG00000032317 9126 3.281 0.833 - - - - 0.814 0.829 - 0.805 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
42. rtn1b ENSDARG00000021143 1682 3.258 - 0.805 - - - 0.920 0.763 - 0.770 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
43. lfng ENSDARG00000037879 11783 3.252 0.819 0.732 - - - 0.894 - - 0.807 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
44. zic1 ENSDARG00000015567 2520 3.246 0.772 - 0.816 - - 0.844 0.814 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
45. msi1 ENSDARG00000010710 2634 3.245 - 0.734 0.756 - - 0.878 0.877 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
46. dync1i1 ENSDARG00000060948 554 3.237 0.844 - - - - 0.767 0.916 - 0.710 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
47. atp6ap1a ENSDARG00000041417 898 3.236 0.909 0.830 - - - 0.735 0.762 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
48. dnajc5aa ENSDARG00000042948 2885 3.229 - - - - - 0.889 0.835 0.800 0.705 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
49. ZFHX3 ENSDARG00000103057 7759 3.221 0.728 - 0.781 - - 0.902 0.810 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
50. negr1 ENSDARG00000021607 1051 3.215 0.706 - - - - 0.840 0.884 - 0.785 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
51. irx1b ENSDARG00000056594 2224 3.214 0.780 0.731 - - - 0.820 0.883 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
52. clvs2 ENSDARG00000053122 1390 3.213 0.759 0.808 - - - - 0.917 - 0.729 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
53. dla ENSDARG00000010791 9281 3.212 0.801 0.795 - - - - 0.880 - 0.736 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
54. vamp2 ENSDARG00000056877 2158 3.21 0.766 - - - - 0.828 - 0.799 0.817 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
55. nhlh2 ENSDARG00000025495 1860 3.203 0.728 - - - - 0.809 0.910 - 0.756 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
56. lhx1a ENSDARG00000014018 958 3.186 0.771 - - - - 0.864 0.816 - 0.735 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
57. CABZ01111990.1 CABZ01111990.1 4374 3.172 0.810 - 0.708 - - 0.794 0.860 - -
58. st8sia5 ENSDARG00000036584 529 3.165 0.757 0.710 - - - 0.780 0.918 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
59. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.156 0.770 - 0.716 - - 0.861 - - 0.809 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
60. mapk12b ENSDARG00000006409 2246 3.154 0.770 - - - 0.710 0.814 0.860 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
61. hnrnpub ENSDARG00000004735 16496 3.13 0.717 - - - - 0.753 0.817 - 0.843 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
62. AP3B2 1874 3.115 - - - - - 0.868 0.734 0.797 0.716 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
63. gnao1a ENSDARG00000016676 8184 3.093 0.767 0.708 - - - - 0.866 - 0.752 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
64. arnt2 ENSDARG00000103697 5731 3.053 - - 0.722 - - 0.809 0.804 - 0.718 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
65. tmpob ENSDARG00000022978 8121 3.02 - - 0.722 - - 0.800 0.728 - 0.770 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
66. ctnnd2b ENSDARG00000003779 964 3.015 - - 0.700 - - 0.715 0.885 - 0.715 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
67. nadl1.2 695 3 0.791 0.732 - - - 0.701 0.776 - - neural adhesion molecule L1.2, transcript variant X1
68. adarb1a ENSDARG00000041609 476 2.988 0.730 - - - - 0.733 0.811 - 0.714 adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
69. tmem47 ENSDARG00000057322 4691 2.937 0.703 - - - - 0.701 0.700 0.833 - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
70. pcdh1gc5 ENSDARG00000104826 10052 2.747 0.861 - - - - 0.944 0.942 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
71. slc32a1 ENSDARG00000059775 1092 2.678 0.931 - - - - 0.950 0.797 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
72. vgf ENSDARG00000105529 247 2.668 0.826 - - - - 0.970 0.872 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
73. zic4 ENSDARG00000031307 1228 2.667 0.787 - - - - 0.951 0.929 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
74. cdk5r1b ENSDARG00000045087 2075 2.663 - 0.925 - - - 0.908 0.830 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
75. slc1a3a ENSDARG00000104431 9888 2.621 0.801 - - - - 0.966 0.854 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
76. sall3b ENSDARG00000057586 982 2.62 - - - 0.785 - 0.938 0.897 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
77. adcyap1b ENSDARG00000027740 1539 2.62 - 0.779 - - - 0.974 0.867 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
78. necap1 ENSDARG00000020798 612 2.616 0.832 - - - - 0.903 0.881 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
79. ppp3ca ENSDARG00000004988 615 2.615 - 0.949 - - - 0.871 0.795 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
80. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.612 0.866 - - - - 0.877 0.869 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
81. myt1b ENSDARG00000102879 5411 2.6 0.853 - - - - 0.900 0.847 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
82. vim ENSDARG00000010008 3551 2.6 0.847 - - - - 0.908 0.845 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
83. C7H4orf48 C7H4orf48 1455 2.593 - 0.769 - - - 0.910 0.914 - -
84. SPOCK1 ENSDARG00000074644 794 2.583 - - - - - 0.921 0.915 - 0.747 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
85. ndrg4 ENSDARG00000103937 1234 2.583 - - - - - 0.924 0.810 - 0.849 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
86. stxbp1a ENSDARG00000001994 5154 2.581 - 0.787 - - - 0.905 0.889 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
87. ckbb ENSDARG00000043257 3503 2.579 0.775 - - - - 0.931 0.873 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
88. CDK5R1 CDK5R1 562 2.577 0.917 - - - - 0.877 0.783 - -
89. spock2 ENSDARG00000075393 791 2.574 0.881 - - - - 0.910 0.783 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
90. pcsk1nl ENSDARG00000076170 1232 2.572 0.726 - - - - 0.915 0.931 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
91. SEMA7A ENSDARG00000078707 465 2.57 0.770 - - - - 0.904 0.896 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
92. syt11a ENSDARG00000057913 1145 2.566 0.740 - - - - 0.913 0.913 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
93. pcsk1 ENSDARG00000002600 404 2.565 0.792 - - - - 0.924 0.849 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
94. BX511121.1 ENSDARG00000029997 1774 2.558 0.814 0.867 - - - - 0.877 - -
95. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.557 0.812 - - - - 0.926 0.819 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
96. adam11 ENSDARG00000079204 298 2.556 0.717 0.882 - - - 0.957 - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
97. her4.1 ENSDARG00000056732 1264 2.551 0.731 - - - - 0.992 0.828 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
98. vamp1 ENSDARG00000031283 3094 2.55 0.718 0.902 - - - 0.930 - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
99. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.548 0.835 - - - - 0.917 0.796 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
100. hoxc4a ENSDARG00000070338 1382 2.547 0.814 - - - - 0.961 0.772 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]

There are 2103 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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