Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sep-02_1

Gene Name Gene ID Reads Annotation
Sep-02_1 Sep-02_1 19203











Genes with expression patterns similar to Sep-02_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. Sep-02_1 Sep-02_1 19203 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. CETN1 ENSGALG00000026741 7243 1.747 - - - - - - - 0.912 - 0.835 centrin 1 [Source:NCBI gene;Acc:422668]
3. YAF2 ENSGALG00000009540 8452 1.635 - - - - - - - 0.905 - 0.730 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
4. gga-mir-6587 ENSGALG00000026386 9441 1.62 - - - - - - - 0.904 - 0.716 gga-mir-6587 [Source:miRBase;Acc:MI0022407]
5. NUP107 ENSGALG00000009934 2097 1.604 - - - - - - - 0.876 - 0.728 nucleoporin 107 [Source:NCBI gene;Acc:101751988]
6. NUP93 ENSGALG00000003010 16504 0.997 - - - - - - 0.997 - - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
7. WDFY3 10775 0.997 - - - - - - 0.997 - - - WD repeat and FYVE domain containing 3, transcript variant X7
8. PRRC1 ENSGALG00000014703 9962 0.996 - - - - - - 0.996 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
9. KIF4A ENSGALG00000004195 25487 0.996 - - - - - - 0.996 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
10. ERP29 ENSGALG00000023510 47100 0.996 - - - - - - 0.996 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
11. TTLL5 ENSGALG00000010340 4875 0.995 - - - - - - 0.995 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
12. SNX24 ENSGALG00000018874 4482 0.995 - - - - - - 0.995 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
13. ING3 ENSGALG00000009023 4961 0.995 - - - - - - 0.995 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
14. MMP2 ENSGALG00000003580 13120 0.995 - - - - - - 0.995 - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
15. RNF114 ENSGALG00000008021 6078 0.995 - - - - - - 0.995 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
16. RAB14 ENSGALG00000001474 12617 0.995 - - - - - - 0.995 - - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
17. NEDD4L ENSGALG00000034584 5881 0.995 - - - - - - 0.995 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
18. IL17RD ENSGALG00000005499 5844 0.995 - - - - - - 0.995 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
19. NT5DC2 ENSGALG00000035596 27633 0.995 - - - - - - 0.995 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
20. ISCA1 ENSGALG00000012606 10342 0.995 - - - - - - 0.995 - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
21. GNA13 ENSGALG00000036028 9791 0.995 - - - - - - 0.995 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
22. POLDIP3 ENSGALG00000011863 6424 0.994 - - - - - - 0.994 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
23. SULF1 ENSGALG00000039553 5115 0.994 - - - - - - 0.994 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
24. CCNY ENSGALG00000007076 3921 0.994 - - - - - - 0.994 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
25. VPS39 ENSGALG00000008991 4018 0.994 - - - - - - 0.994 - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
26. PSMD9 ENSGALG00000004352 7284 0.994 - - - - - - 0.994 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
27. PASK ENSGALG00000006016 3096 0.994 - - - - - - 0.994 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
28. ENSGALG00000003150 ENSGALG00000003150 10001 0.994 - - - - - - 0.994 - - -
29. WNT7B ENSGALG00000036255 3343 0.994 - - - - - - 0.994 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
30. PTGR2 ENSGALG00000009269 4991 0.994 - - - - - - 0.994 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
31. ARHGEF28 ENSGALG00000014923 2523 0.993 - - - - - - 0.993 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
32. DGKD ENSGALG00000001730 4456 0.993 - - - - - - 0.993 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
33. ENSGALG00000022570 ENSGALG00000022570 90374 0.991 - - - - - - 0.991 - - -
34. PRKACB ENSGALG00000028530 12506 0.991 - - - - - - 0.991 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
35. MYL12A ENSGALG00000014854 63033 0.988 - - - - - - 0.988 - - - myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
36. SNRPD1 ENSGALG00000041334 219195 0.967 - - - - - - 0.967 - - - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
37. MARCKSL1 ENSGALG00000032335 88728 0.965 - - - - - - 0.965 - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
38. SMNDC1 ENSGALG00000008561 14415 0.951 - - - - - - 0.951 - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
39. MSX2 ENSGALG00000038848 6950 0.947 - - - - - - 0.947 - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
40. RPS20 ENSGALG00000014432 209638 0.927 - - - - - - 0.927 - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
41. RFT1 ENSGALG00000001945 2446 0.916 - - - - - - - 0.916 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
42. ZNF319 ENSGALG00000000999 1272 0.916 - - - - - - - 0.916 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
43. RNF168 ENSGALG00000006392 507 0.916 - - - - - - - 0.916 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
44. PIGL ENSGALG00000004492 669 0.916 - - - - - - - 0.916 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
45. ENSGALG00000012250 ENSGALG00000012250 581 0.916 - - - - - - - 0.916 - -
46. CRELD2 ENSGALG00000008551 2084 0.916 - - - - - - - 0.916 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
47. ATP2B4 ENSGALG00000003601 3746 0.916 - - - - - - - 0.916 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
48. RNFT1 ENSGALG00000005205 2888 0.916 - - - - - - - 0.916 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
49. ELAVL4 ENSGALG00000010533 4978 0.916 - - - - - - - 0.916 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
50. SPDYA ENSGALG00000017392 503 0.915 - - - - - - - 0.915 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
51. CENPL ENSGALG00000038411 4867 0.915 - - - - - - - 0.915 - - centromere protein L [Source:NCBI gene;Acc:426563]
52. FBF1 ENSGALG00000002179 1738 0.915 - - - - - - - 0.915 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
53. TMEM192 ENSGALG00000009528 2428 0.915 - - - - - - - 0.915 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
54. PMP22 ENSGALG00000031425 5358 0.915 - - - - - - - 0.915 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
55. SNIP1 ENSGALG00000002010 1429 0.915 - - - - - - - 0.915 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
56. PDCD6IP ENSGALG00000033500 580 0.915 - - - - - - - 0.915 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
57. RAI2 ENSGALG00000016538 1074 0.915 - - - - - - - 0.915 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
58. SLC35D1 ENSGALG00000011121 4456 0.915 - - - - - - - 0.915 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
59. SFT2D1 ENSGALG00000020005 10855 0.914 - - - - - - - 0.914 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
60. C6ORF192 C6ORF192 4224 0.914 - - - - - - - 0.914 - -
61. NVL ENSGALG00000009322 5286 0.914 - - - - - - - 0.914 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
62. TMEM126A ENSGALG00000014066 6149 0.913 - - - - - - - 0.913 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
63. ALS2 ENSGALG00000008415 2576 0.913 - - - - - - - 0.913 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
64. FUNDC2 ENSGALG00000029585 9334 0.913 - - - - - - - 0.913 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
65. NBL1 ENSGALG00000040297 8165 0.912 - - - - - - - 0.912 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
66. ATE1 ENSGALG00000009502 3751 0.912 - - - - - - - 0.912 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
67. RCOR3 ENSGALG00000009871 7022 0.912 - - - - - - - 0.912 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
68. MAP2K2 ENSGALG00000001267 3857 0.912 - - - - - - - 0.912 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
69. CRNKL1 ENSGALG00000008429 7280 0.91 - - - - - - - 0.910 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
70. DLC1 ENSGALG00000013715 5297 0.91 - - - - - - - 0.910 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
71. CDCA7 ENSGALG00000040833 7484 0.909 - - - - - - - 0.909 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
72. PPM1D ENSGALG00000035610 6530 0.909 - - - - - - - 0.909 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
73. TTL ENSGALG00000008614 3991 0.908 - - - - - - - 0.908 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
74. IFNAR2 ENSGALG00000041867 1596 0.907 - - - - - - - 0.907 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
75. RBM7 ENSGALG00000007017 8779 0.907 - - - - - - - 0.907 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
76. PPP3R1 ENSGALG00000023648 3417 0.906 - - - - - - - 0.906 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
77. PDHB ENSGALG00000029576 12254 0.905 - - - - - - - 0.905 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
78. G3BP2 ENSGALG00000010882 21129 0.902 - - - - - - - 0.902 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
79. EXO1 ENSGALG00000010748 7572 0.9 - - - - - - - 0.900 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
80. JSC JSC 7982 0.896 - - - - - - - 0.896 - -
81. COX7A2L ENSGALG00000037996 13646 0.887 - - - - - - - 0.887 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
82. RFC3 ENSGALG00000017064 7011 0.886 - - - - - - - 0.886 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
83. KIAA0196 KIAA0196 4011 0.884 - - - - - - - 0.884 - -
84. LY6E ENSGALG00000041621 16227 0.882 - - - - - - - - - 0.882 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
85. AP2B1 ENSGALG00000042125 13229 0.881 - - - - - - - 0.881 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
86. GARS ENSGALG00000005694 18264 0.879 - - - - - - - 0.879 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
87. INPP5A ENSGALG00000010493 6769 0.874 - - - - - - - 0.874 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
88. SBNO1 ENSGALG00000003392 6731 0.873 - - - - - - - 0.873 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
89. XPO5 ENSGALG00000010341 24765 0.871 - - - - - - - 0.871 - - exportin 5 [Source:NCBI gene;Acc:421450]
90. TPD52 ENSGALG00000040167 9891 0.87 - - - - - - - 0.870 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
91. ANKRD11 ENSGALG00000006222 12327 0.867 - - - - - - - 0.867 - - ankyrin repeat domain 11, transcript variant X2
92. UCHL5 ENSGALG00000002524 28460 0.862 - - - - - - 0.862 - - - ubiquitin C-terminal hydrolase L5 [Source:NCBI gene;Acc:424359]
93. N4BP2 ENSGALG00000014281 3144 0.859 - - - - - - - - - 0.859 NEDD4 binding protein 2, transcript variant X6
94. ACTG1_1 ENSGALG00000001381 64662 0.859 - - - - - - 0.859 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
95. DDRGK1 ENSGALG00000016003 9098 0.855 - - - - - - 0.855 - - - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
96. PUS1 ENSGALG00000002354 10153 0.853 - - - - - - 0.853 - - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
97. XRCC5 ENSGALG00000011492 6802 0.851 - - - - - - - 0.851 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
98. VWF ENSGALG00000017272 1012 0.851 - - - - - - - - - 0.851 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
99. PRTG ENSGALG00000037336 34665 0.85 - - - - - - - 0.850 - - protogenin [Source:NCBI gene;Acc:415407]
100. CABLES1 ENSGALG00000014998 1636 0.846 - - - - - - - - - 0.846 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]

There are 347 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA