Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Sema6d

Gene Name Gene ID Reads Annotation
Sema6d ENSMUSG00000027200 1413 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]







Genes with expression patterns similar to Sema6d

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sema6d ENSMUSG00000027200 1413 6 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
2. Gm14286 ENSMUSG00000087445 166 1.776 0.860 - - - - 0.916 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
3. Trdmt1 ENSMUSG00000026723 391 1.748 0.825 - - - - 0.923 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
4. Vamp2 ENSMUSG00000020894 1819 1.73 0.894 - - - - 0.836 vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
5. Cox10 ENSMUSG00000042148 1382 1.72 0.841 - - - - 0.879 heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 [Source:MGI Symbol;Acc:MGI:1917633]
6. Vimp 1184 1.719 0.824 - - - - 0.895 VCP-interacting membrane protein
7. Cdc25b ENSMUSG00000027330 1004 1.698 - - - - 0.811 0.887 cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
8. 2210016L21Rik ENSMUSG00000029559 1199 1.691 0.841 - - - - 0.850 RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
9. Trp53bp2 ENSMUSG00000026510 1450 1.682 - - - - 0.867 0.815 transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
10. Tnks1bp1 ENSMUSG00000033955 551 1.678 0.807 - - - - 0.871 tankyrase 1 binding protein 1 [Source:MGI Symbol;Acc:MGI:2446193]
11. Uckl1 ENSMUSG00000089917 375 1.677 0.847 - - - 0.830 - uridine-cytidine kinase 1-like 1 [Source:MGI Symbol;Acc:MGI:1915806]
12. Pbxip1 ENSMUSG00000042613 1226 1.676 0.834 - - - - 0.842 pre B cell leukemia transcription factor interacting protein 1 [Source:MGI Symbol;Acc:MGI:2441670]
13. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 1.67 - - - - 0.768 0.902 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
14. Med27 ENSMUSG00000026799 923 1.669 0.782 - - - 0.887 - mediator complex subunit 27 [Source:MGI Symbol;Acc:MGI:1916225]
15. Amd1 ENSMUSG00000075232 1041 1.661 0.748 - - - - 0.913 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
16. Fut10 ENSMUSG00000046152 702 1.659 0.773 - - - - 0.886 fucosyltransferase 10 [Source:MGI Symbol;Acc:MGI:2384748]
17. Ipo4 ENSMUSG00000002319 1588 1.656 - - - - 0.763 0.893 importin 4 [Source:MGI Symbol;Acc:MGI:1923001]
18. Slc25a53 ENSMUSG00000044348 516 1.644 - - - - 0.769 0.875 solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
19. Upf1 ENSMUSG00000058301 1982 1.64 - - - - 0.786 0.854 UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
20. Gng5 ENSMUSG00000068523 1998 1.634 - - - - 0.857 0.777 guanine nucleotide binding protein (G protein), gamma 5 [Source:MGI Symbol;Acc:MGI:109164]
21. Draxin ENSMUSG00000029005 726 1.619 - - - - 0.785 0.834 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
22. Tbc1d20 ENSMUSG00000027465 1026 1.619 - - - - 0.788 0.831 TBC1 domain family, member 20 [Source:MGI Symbol;Acc:MGI:1914481]
23. Stk25 ENSMUSG00000026277 2131 1.616 - - - - 0.736 0.880 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
24. Zfp40 ENSMUSG00000002617 724 1.612 0.798 - - - 0.814 - zinc finger protein 40 [Source:MGI Symbol;Acc:MGI:99185]
25. Taz ENSMUSG00000009995 1408 1.609 0.721 - - - - 0.888 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
26. Hoxb5 ENSMUSG00000038700 2439 1.609 - - - - 0.741 0.868 homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
27. Pak4 ENSMUSG00000030602 1778 1.607 - - - - 0.738 0.869 p21 (RAC1) activated kinase 4 [Source:MGI Symbol;Acc:MGI:1917834]
28. Ndufb6 ENSMUSG00000071014 2988 1.572 - - - - 0.860 0.712 NADH:ubiquinone oxidoreductase subunit B6 [Source:MGI Symbol;Acc:MGI:2684983]
29. Bysl ENSMUSG00000023988 1632 1.571 0.796 - - - - 0.775 bystin-like [Source:MGI Symbol;Acc:MGI:1858419]
30. Prpf38b ENSMUSG00000027881 5873 1.571 - - - - 0.716 0.855 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:MGI Symbol;Acc:MGI:1914171]
31. Pde7a ENSMUSG00000069094 2633 1.547 - - - - 0.760 0.787 phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
32. St3gal2 ENSMUSG00000031749 2401 1.541 - - - - 0.816 0.725 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
33. Ethe1 ENSMUSG00000064254 1274 1.539 0.835 - - - - 0.704 ethylmalonic encephalopathy 1 [Source:MGI Symbol;Acc:MGI:1913321]
34. Krit1 ENSMUSG00000000600 1627 1.528 - - - - 0.774 0.754 KRIT1, ankyrin repeat containing [Source:MGI Symbol;Acc:MGI:1930618]
35. Alg2 ENSMUSG00000039740 4275 1.527 0.741 - - - 0.786 - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1914731]
36. Zmym4 ENSMUSG00000042446 4810 1.501 - - - - 0.784 0.717 zinc finger, MYM-type 4 [Source:MGI Symbol;Acc:MGI:1915035]
37. Ccnt1 ENSMUSG00000011960 4338 1.498 - - - - 0.718 0.780 cyclin T1 [Source:MGI Symbol;Acc:MGI:1328363]
38. Cyfip1 ENSMUSG00000030447 3994 1.483 - - - - 0.760 0.723 cytoplasmic FMR1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1338801]
39. Srsf10 ENSMUSG00000028676 5612 1.433 - - - - 0.710 0.723 serine/arginine-rich splicing factor 10 [Source:MGI Symbol;Acc:MGI:1333805]
40. Pex14 ENSMUSG00000028975 920 0.93 0.930 - - - - - peroxisomal biogenesis factor 14 [Source:MGI Symbol;Acc:MGI:1927868]
41. Brms1 ENSMUSG00000080268 492 0.929 - - - - - 0.929 breast cancer metastasis-suppressor 1 [Source:MGI Symbol;Acc:MGI:2388804]
42. Usp50 ENSMUSG00000027364 304 0.929 - - - - - 0.929 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
43. Slc13a4 ENSMUSG00000029843 66 0.926 0.926 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
44. Smc1b ENSMUSG00000022432 39 0.925 0.925 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
45. Gm5073 ENSMUSG00000083140 19 0.925 0.925 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
46. Gm4353 ENSMUSG00000091900 44 0.925 0.925 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
47. Gm11531 ENSMUSG00000075587 27 0.925 0.925 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
48. Serpinb1b ENSMUSG00000051029 30 0.925 0.925 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
49. Gm5697 ENSMUSG00000081557 24 0.925 0.925 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
50. Lrrc4b ENSMUSG00000047085 349 0.924 0.924 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
51. Bcr ENSMUSG00000009681 588 0.924 - - - - - 0.924 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
52. Prl3b1 ENSMUSG00000038891 69 0.923 0.923 - - - - - prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]
53. Lamp5 ENSMUSG00000027270 112 0.923 0.923 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
54. 4930441O14Rik 4930441O14Rik 43 0.923 0.923 - - - - -
55. Gm14951 ENSMUSG00000084776 22 0.922 0.922 - - - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
56. Thg1l ENSMUSG00000011254 324 0.922 0.922 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
57. Gm4217 ENSMUSG00000097954 30 0.922 0.922 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
58. Fam131a ENSMUSG00000050821 113 0.921 - - - - - 0.921 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
59. Samd15 ENSMUSG00000090812 66 0.92 0.920 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
60. 3010001F23Rik ENSMUSG00000084885 157 0.92 0.920 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
61. Recql5 ENSMUSG00000020752 591 0.919 - - - - - 0.919 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
62. Hes3 ENSMUSG00000028946 73 0.919 - - - - - 0.919 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
63. Homer3 ENSMUSG00000003573 2190 0.919 - - - - - 0.919 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
64. Ostm1 ENSMUSG00000038280 208 0.918 - - - - - 0.918 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
65. Fads3 ENSMUSG00000024664 192 0.918 0.918 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
66. Gm10307 ENSMUSG00000101093 159 0.917 - - - - - 0.917 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
67. Gm24451 ENSMUSG00000065287 57 0.917 - - - - - 0.917 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
68. Gtf2f2 ENSMUSG00000067995 1487 0.917 - - - - - 0.917 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
69. Stbd1 ENSMUSG00000047963 377 0.917 - - - - - 0.917 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
70. Mrpl37 ENSMUSG00000028622 2555 0.917 - - - - - 0.917 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
71. Il17d ENSMUSG00000050222 119 0.917 - - - - - 0.917 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
72. Phf19 ENSMUSG00000026873 83 0.917 - - - - - 0.917 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
73. Sh3rf2 ENSMUSG00000057719 60 0.916 - - - - - 0.916 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
74. Gm13910 ENSMUSG00000063684 126 0.916 - - - - - 0.916 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
75. Ftx ENSMUSG00000086370 285 0.916 - - - - - 0.916 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
76. Ripk3 ENSMUSG00000022221 346 0.915 0.915 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
77. Htr1b ENSMUSG00000049511 77 0.915 - - - - - 0.915 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
78. 9130023H24Rik ENSMUSG00000062944 258 0.914 - - - - - 0.914 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
79. Hbb-bs ENSMUSG00000052305 2551 0.914 - - - - - 0.914 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
80. Tbc1d23 ENSMUSG00000022749 1006 0.914 0.914 - - - - - TBC1 domain family, member 23 [Source:MGI Symbol;Acc:MGI:1914831]
81. Lurap1l ENSMUSG00000048706 165 0.913 0.913 - - - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
82. Slc30a5 ENSMUSG00000021629 839 0.913 - - - - - 0.913 solute carrier family 30 (zinc transporter), member 5 [Source:MGI Symbol;Acc:MGI:1916298]
83. Gm26659 ENSMUSG00000097609 40 0.911 0.911 - - - - - predicted gene, 26659 [Source:MGI Symbol;Acc:MGI:5477153]
84. Paxbp1 ENSMUSG00000022974 322 0.911 - - - - - 0.911 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
85. Dfna5 492 0.911 - - - - - 0.911 deafness, autosomal dominant 5 (human), transcript variant X3
86. Phf12 ENSMUSG00000037791 554 0.911 - - - - - 0.911 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
87. Ces2b ENSMUSG00000050097 81 0.91 0.910 - - - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
88. Zfp820 ENSMUSG00000069743 854 0.91 - - - - - 0.910 zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
89. Rasl12 ENSMUSG00000041696 228 0.909 0.909 - - - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
90. Slc38a7 ENSMUSG00000036534 269 0.909 0.909 - - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
91. Gm13476 Gm13476 165 0.909 - - - - - 0.909
92. Gucd1 ENSMUSG00000033416 864 0.909 - - - - - 0.909 guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
93. Cd68 ENSMUSG00000018774 174 0.908 0.908 - - - - - CD68 antigen [Source:MGI Symbol;Acc:MGI:88342]
94. Pcdha2 ENSMUSG00000104148 246 0.908 - - - - - 0.908 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
95. Gm15443 ENSMUSG00000082588 32 0.908 0.908 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
96. Acsl6 ENSMUSG00000020333 249 0.908 - - - - - 0.908 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
97. Gm26869 ENSMUSG00000097879 104 0.907 0.907 - - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
98. Mfsd1 ENSMUSG00000027775 1963 0.907 0.907 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
99. Gm6311 ENSMUSG00000061833 161 0.907 - - - - 0.907 - predicted gene 6311 [Source:MGI Symbol;Acc:MGI:3644735]
100. Tnnt1 ENSMUSG00000064179 836 0.907 0.907 - - - - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]

There are 900 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA