Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sema3a

Gene Name Gene ID Reads Annotation
Sema3a ENSMUSG00000028883 2678 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:MGI Symbol;Acc:MGI:107558]







Genes with expression patterns similar to Sema3a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sema3a ENSMUSG00000028883 2678 6 1.000 1.000 1.000 1.000 1.000 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A [Source:MGI Symbol;Acc:MGI:107558]
2. Gm23887 ENSMUSG00000084632 68 0.788 - - - - 0.788 - predicted gene, 23887 [Source:MGI Symbol;Acc:MGI:5453664]
3. Prpf38a ENSMUSG00000063800 1474 0.787 - - - - 0.787 - PRP38 pre-mRNA processing factor 38 (yeast) domain containing A [Source:MGI Symbol;Acc:MGI:1916962]
4. Sfn ENSMUSG00000047281 305 0.779 - - - - 0.779 - stratifin [Source:MGI Symbol;Acc:MGI:1891831]
5. Chd1l ENSMUSG00000028089 889 0.769 - - - - 0.769 - chromodomain helicase DNA binding protein 1-like [Source:MGI Symbol;Acc:MGI:1915308]
6. Gm8618 ENSMUSG00000073559 115 0.769 - - - - 0.769 - predicted gene 8618 [Source:MGI Symbol;Acc:MGI:3647540]
7. Gm20448 Gm20448 48 0.765 - - - - 0.765 -
8. Dleu2 ENSMUSG00000097589 797 0.764 - - 0.764 - - - deleted in lymphocytic leukemia, 2 [Source:MGI Symbol;Acc:MGI:1934030]
9. Sep-04 Sep-04 178 0.754 - - - - 0.754 -
10. Btn1a1 ENSMUSG00000000706 24 0.752 - - - - 0.752 - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
11. Gm26606 ENSMUSG00000097337 23 0.752 - - - - 0.752 - predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
12. A730090N16Rik ENSMUSG00000090120 19 0.751 - - - - 0.751 - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
13. 1600014C23Rik ENSMUSG00000094690 35 0.751 - - - - 0.751 - RIKEN cDNA 1600014C23 gene [Source:MGI Symbol;Acc:MGI:1919490]
14. Ltk ENSMUSG00000027297 12 0.751 - - - - 0.751 - leukocyte tyrosine kinase [Source:MGI Symbol;Acc:MGI:96840]
15. Gm16712 ENSMUSG00000097077 14 0.751 - - - - 0.751 - predicted gene, 16712 [Source:MGI Symbol;Acc:MGI:4439636]
16. Ttll13 ENSMUSG00000045467 27 0.751 - - - - 0.751 - tubulin tyrosine ligase-like family, member 13 [Source:MGI Symbol;Acc:MGI:1920845]
17. Gm22791 ENSMUSG00000087857 19 0.751 - - - - 0.751 - predicted gene, 22791 [Source:MGI Symbol;Acc:MGI:5452568]
18. Gm14391 ENSMUSG00000078903 51 0.75 - - - - 0.750 - predicted gene 14391 [Source:MGI Symbol;Acc:MGI:3709324]
19. P2rx6 ENSMUSG00000022758 13 0.75 - - - - 0.750 - purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
20. Relt ENSMUSG00000008318 226 0.75 - - - - 0.750 - RELT tumor necrosis factor receptor [Source:MGI Symbol;Acc:MGI:2443373]
21. Lmod1 ENSMUSG00000048096 44 0.75 - - - - 0.750 - leiomodin 1 (smooth muscle) [Source:MGI Symbol;Acc:MGI:2135671]
22. Cr2 ENSMUSG00000026616 16 0.749 - - - - 0.749 - complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
23. Shf ENSMUSG00000033256 192 0.749 - - - - 0.749 - Src homology 2 domain containing F [Source:MGI Symbol;Acc:MGI:3613669]
24. Sytl1 ENSMUSG00000028860 26 0.749 - - - - 0.749 - synaptotagmin-like 1 [Source:MGI Symbol;Acc:MGI:1933365]
25. Ppargc1b ENSMUSG00000033871 120 0.749 - - - - 0.749 - peroxisome proliferative activated receptor, gamma, coactivator 1 beta [Source:MGI Symbol;Acc:MGI:2444934]
26. Stmnd1 ENSMUSG00000063529 14 0.749 - - - - 0.749 - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
27. Atg10 ENSMUSG00000021619 384 0.748 - 0.748 - - - - autophagy related 10 [Source:MGI Symbol;Acc:MGI:1914045]
28. Spt1 Spt1 55 0.748 - - - - 0.748 -
29. Gast ENSMUSG00000017165 13 0.747 - - - - 0.747 - gastrin [Source:MGI Symbol;Acc:MGI:104768]
30. Ier5l ENSMUSG00000089762 201 0.746 - - - - 0.746 - immediate early response 5-like [Source:MGI Symbol;Acc:MGI:1919750]
31. Gas5 ENSMUSG00000053332 2096 0.746 - 0.746 - - - - growth arrest specific 5 [Source:MGI Symbol;Acc:MGI:95659]
32. 4933438K21Rik ENSMUSG00000093617 64 0.745 - - - - 0.745 - RIKEN cDNA 4933438K21 gene [Source:MGI Symbol;Acc:MGI:1918520]
33. Dus2l Dus2l 540 0.745 - - 0.745 - - -
34. Gm26807 ENSMUSG00000097484 14 0.745 - - - - 0.745 - predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
35. Gm15843 ENSMUSG00000085812 90 0.745 - - - - 0.745 - predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
36. Epyc ENSMUSG00000019936 32 0.744 - - - - 0.744 - epiphycan [Source:MGI Symbol;Acc:MGI:107942]
37. Mrps11 ENSMUSG00000030611 623 0.743 - - - - 0.743 - mitochondrial ribosomal protein S11 [Source:MGI Symbol;Acc:MGI:1915244]
38. Gm20204 Gm20204 2410 0.742 - 0.742 - - - -
39. Glcci1 ENSMUSG00000029638 55 0.738 - - - - 0.738 - glucocorticoid induced transcript 1 [Source:MGI Symbol;Acc:MGI:2179717]
40. Pcdhb3 ENSMUSG00000045498 48 0.735 - - - - 0.735 - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
41. Fam13b ENSMUSG00000036501 75 0.734 - - - - 0.734 - family with sequence similarity 13, member B [Source:MGI Symbol;Acc:MGI:2447834]
42. Mall ENSMUSG00000027377 52 0.734 - - - - 0.734 - mal, T cell differentiation protein-like [Source:MGI Symbol;Acc:MGI:2385152]
43. Slc22a3 ENSMUSG00000023828 78 0.734 - - - - 0.734 - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
44. Atp10a ENSMUSG00000025324 152 0.733 - - - - 0.733 - ATPase, class V, type 10A [Source:MGI Symbol;Acc:MGI:1330809]
45. Lyst ENSMUSG00000019726 99 0.733 - - - - 0.733 - lysosomal trafficking regulator [Source:MGI Symbol;Acc:MGI:107448]
46. Il16 ENSMUSG00000001741 60 0.732 - - - - 0.732 - interleukin 16 [Source:MGI Symbol;Acc:MGI:1270855]
47. Plat ENSMUSG00000031538 520 0.732 - - 0.732 - - - plasminogen activator, tissue [Source:MGI Symbol;Acc:MGI:97610]
48. Farp1 ENSMUSG00000025555 3653 0.731 - - - - 0.731 - FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:MGI Symbol;Acc:MGI:2446173]
49. Rpl5-ps1 ENSMUSG00000082193 273 0.731 - - - - 0.731 - ribosomal protein L5, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3647110]
50. Sh3bp2 ENSMUSG00000054520 148 0.73 - - - - 0.730 - SH3-domain binding protein 2 [Source:MGI Symbol;Acc:MGI:1346349]
51. Slc35f5 ENSMUSG00000026342 450 0.73 - - 0.730 - - - solute carrier family 35, member F5 [Source:MGI Symbol;Acc:MGI:1921400]
52. Wdsub1 ENSMUSG00000026988 729 0.73 - - 0.730 - - - WD repeat, SAM and U-box domain containing 1 [Source:MGI Symbol;Acc:MGI:1919387]
53. Vsnl1 ENSMUSG00000054459 52 0.729 - - - - 0.729 - visinin-like 1 [Source:MGI Symbol;Acc:MGI:1349453]
54. Ccdc78 ENSMUSG00000071202 90 0.729 - - - - 0.729 - coiled-coil domain containing 78 [Source:MGI Symbol;Acc:MGI:2685784]
55. Aox1 ENSMUSG00000063558 17 0.728 - - - - 0.728 - aldehyde oxidase 1 [Source:MGI Symbol;Acc:MGI:88035]
56. Rcsd1 ENSMUSG00000040723 428 0.728 - 0.728 - - - - RCSD domain containing 1 [Source:MGI Symbol;Acc:MGI:2676394]
57. Ppp1r36 ENSMUSG00000052221 97 0.727 - - - - 0.727 - protein phosphatase 1, regulatory subunit 36 [Source:MGI Symbol;Acc:MGI:2684916]
58. Timeless ENSMUSG00000039994 1680 0.726 - - - - 0.726 - timeless circadian clock 1 [Source:MGI Symbol;Acc:MGI:1321393]
59. Gm17541 ENSMUSG00000091732 261 0.726 - - - - 0.726 - predicted gene, 17541 [Source:MGI Symbol;Acc:MGI:4937175]
60. Slc27a1 ENSMUSG00000031808 233 0.725 - - - - 0.725 - solute carrier family 27 (fatty acid transporter), member 1 [Source:MGI Symbol;Acc:MGI:1347098]
61. Apba1 ENSMUSG00000024897 107 0.725 - - - - 0.725 - amyloid beta (A4) precursor protein binding, family A, member 1 [Source:MGI Symbol;Acc:MGI:1860297]
62. Nub1 ENSMUSG00000028954 992 0.725 - 0.725 - - - - negative regulator of ubiquitin-like proteins 1 [Source:MGI Symbol;Acc:MGI:1889001]
63. Zfp763 ENSMUSG00000067430 1561 0.725 - 0.725 - - - - zinc finger protein 763 [Source:MGI Symbol;Acc:MGI:1920701]
64. Rpn2 ENSMUSG00000027642 6429 0.724 - 0.724 - - - - ribophorin II [Source:MGI Symbol;Acc:MGI:98085]
65. Ppip5k1 ENSMUSG00000033526 375 0.724 - - - - 0.724 - diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
66. Mgmt ENSMUSG00000054612 134 0.721 - - - - 0.721 - O-6-methylguanine-DNA methyltransferase [Source:MGI Symbol;Acc:MGI:96977]
67. Hist1h4c ENSMUSG00000060678 136 0.72 - - - - 0.720 - histone cluster 1, H4c [Source:MGI Symbol;Acc:MGI:2448421]
68. Atg7 ENSMUSG00000030314 420 0.72 - - - - 0.720 - autophagy related 7 [Source:MGI Symbol;Acc:MGI:1921494]
69. Gm7658 ENSMUSG00000082935 223 0.719 - - - - 0.719 - predicted gene 7658 [Source:MGI Symbol;Acc:MGI:3648029]
70. Gm25304 Gm25304 44 0.719 - - - - 0.719 -
71. Rbfox2 ENSMUSG00000033565 6540 0.717 - 0.717 - - - - RNA binding protein, fox-1 homolog (C. elegans) 2 [Source:MGI Symbol;Acc:MGI:1933973]
72. Rps17 ENSMUSG00000061787 2563 0.717 - - - - 0.717 - ribosomal protein S17 [Source:MGI Symbol;Acc:MGI:1309526]
73. Nelfe ENSMUSG00000024369 992 0.717 - - - - 0.717 - negative elongation factor complex member E, Rdbp [Source:MGI Symbol;Acc:MGI:102744]
74. Vcam1 ENSMUSG00000027962 485 0.717 - - - - 0.717 - vascular cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:98926]
75. Wsb2 ENSMUSG00000029364 343 0.716 - - - - 0.716 - WD repeat and SOCS box-containing 2 [Source:MGI Symbol;Acc:MGI:2144041]
76. BC016423 BC016423 753 0.715 - - - - 0.715 -
77. Gata5 ENSMUSG00000015627 998 0.713 0.713 - - - - - GATA binding protein 5 [Source:MGI Symbol;Acc:MGI:109497]
78. Noc2l ENSMUSG00000095567 594 0.712 - - - - 0.712 - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
79. Rxfp2 ENSMUSG00000053368 56 0.711 - - - - 0.711 - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
80. Tubg2 ENSMUSG00000045007 44 0.708 - - - - 0.708 - tubulin, gamma 2 [Source:MGI Symbol;Acc:MGI:2144208]
81. Gm10031 ENSMUSG00000101523 547 0.707 - - - - 0.707 - predicted pseudogene 10031 [Source:MGI Symbol;Acc:MGI:3704198]
82. Mrs2 ENSMUSG00000021339 104 0.706 - - - - 0.706 - MRS2 magnesium transporter [Source:MGI Symbol;Acc:MGI:2685748]
83. Dkk2 ENSMUSG00000028031 697 0.706 0.706 - - - - - dickkopf WNT signaling pathway inhibitor 2 [Source:MGI Symbol;Acc:MGI:1890663]
84. Gm15446 ENSMUSG00000090015 373 0.706 - - - - 0.706 - predicted gene 15446 [Source:MGI Symbol;Acc:MGI:3709333]
85. 3010001F23Rik ENSMUSG00000084885 157 0.705 - - - - 0.705 - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
86. Irf3 ENSMUSG00000003184 617 0.705 - - 0.705 - - - interferon regulatory factor 3 [Source:MGI Symbol;Acc:MGI:1859179]
87. Coa5 ENSMUSG00000026112 2696 0.704 - 0.704 - - - - cytochrome C oxidase assembly factor 5 [Source:MGI Symbol;Acc:MGI:1923428]
88. Ppfibp1 ENSMUSG00000016487 1415 0.704 - - 0.704 - - - PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:MGI Symbol;Acc:MGI:1914783]
89. Xrn2 ENSMUSG00000027433 5023 0.704 - - - - 0.704 - 5'-3' exoribonuclease 2 [Source:MGI Symbol;Acc:MGI:894687]
90. C330027C09Rik 2892 0.704 - 0.704 - - - - RIKEN cDNA C330027C09 gene, transcript variant X2
91. Phykpl ENSMUSG00000020359 114 0.701 - - - - 0.701 - 5-phosphohydroxy-L-lysine phospholyase [Source:MGI Symbol;Acc:MGI:1920197]
92. Atp7a ENSMUSG00000033792 1341 0.701 - 0.701 - - - - ATPase, Cu++ transporting, alpha polypeptide [Source:MGI Symbol;Acc:MGI:99400]
93. Plrg1 ENSMUSG00000027998 5154 0.701 - 0.701 - - - - pleiotropic regulator 1 [Source:MGI Symbol;Acc:MGI:1858197]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA