Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sdc4

Gene Name Gene ID Reads Annotation
Sdc4 ENSMUSG00000017009 397 syndecan 4 [Source:MGI Symbol;Acc:MGI:1349164]







Genes with expression patterns similar to Sdc4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sdc4 ENSMUSG00000017009 397 6 1.000 1.000 1.000 1.000 1.000 1.000 syndecan 4 [Source:MGI Symbol;Acc:MGI:1349164]
2. Macc1 ENSMUSG00000041886 16 0.832 0.832 - - - - - metastasis associated in colon cancer 1 [Source:MGI Symbol;Acc:MGI:2685113]
3. Plaur ENSMUSG00000046223 50 0.823 - - 0.823 - - - plasminogen activator, urokinase receptor [Source:MGI Symbol;Acc:MGI:97612]
4. Aox4 ENSMUSG00000038242 18 0.816 - - 0.816 - - - aldehyde oxidase 4 [Source:MGI Symbol;Acc:MGI:1919122]
5. Gm13641 ENSMUSG00000082190 9 0.814 0.814 - - - - - predicted gene 13641 [Source:MGI Symbol;Acc:MGI:3651867]
6. Afap1l2 ENSMUSG00000025083 196 0.809 - - 0.809 - - - actin filament associated protein 1-like 2 [Source:MGI Symbol;Acc:MGI:2147658]
7. Lysmd1 ENSMUSG00000053769 252 0.803 - - - - - 0.803 LysM, putative peptidoglycan-binding, domain containing 1 [Source:MGI Symbol;Acc:MGI:1919409]
8. Mical2 ENSMUSG00000038244 295 0.799 - - 0.799 - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
9. Sybu ENSMUSG00000022340 26 0.79 - - 0.790 - - - syntabulin (syntaxin-interacting) [Source:MGI Symbol;Acc:MGI:2442392]
10. Prrt4 ENSMUSG00000079654 149 0.784 - 0.784 - - - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
11. Ilvbl ENSMUSG00000032763 400 0.779 - - - - 0.779 - ilvB (bacterial acetolactate synthase)-like [Source:MGI Symbol;Acc:MGI:1351911]
12. Susd1 ENSMUSG00000038578 51 0.776 - 0.776 - - - - sushi domain containing 1 [Source:MGI Symbol;Acc:MGI:3651543]
13. Fam65c 90 0.772 - - 0.772 - - - family with sequence similarity 65, member C, transcript variant X6
14. Gan ENSMUSG00000052557 227 0.77 - - 0.770 - - - giant axonal neuropathy [Source:MGI Symbol;Acc:MGI:1890619]
15. Gm11824 ENSMUSG00000082128 50 0.77 - 0.770 - - - - predicted gene 11824 [Source:MGI Symbol;Acc:MGI:3651313]
16. Hpdl ENSMUSG00000043155 15 0.769 - - 0.769 - - - 4-hydroxyphenylpyruvate dioxygenase-like [Source:MGI Symbol;Acc:MGI:2444646]
17. Serpind1 ENSMUSG00000022766 52 0.767 - - 0.767 - - - serine (or cysteine) peptidase inhibitor, clade D, member 1 [Source:MGI Symbol;Acc:MGI:96051]
18. Gm12591 ENSMUSG00000082831 8 0.767 - - 0.767 - - - predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
19. Eomes ENSMUSG00000032446 9 0.764 - - 0.764 - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
20. 2900055J20Rik ENSMUSG00000071860 21 0.764 - - 0.764 - - - RIKEN cDNA 2900055J20 gene [Source:MGI Symbol;Acc:MGI:1920251]
21. Cpne4 ENSMUSG00000032564 37 0.764 - - 0.764 - - - copine IV [Source:MGI Symbol;Acc:MGI:1921270]
22. Afp ENSMUSG00000054932 3253 0.764 - - 0.764 - - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
23. Zfp853 ENSMUSG00000093910 3 0.763 - - 0.763 - - - zinc finger protein 853 [Source:MGI Symbol;Acc:MGI:2685638]
24. Gm26862 ENSMUSG00000097644 5 0.763 - - 0.763 - - - predicted gene, 26862 [Source:MGI Symbol;Acc:MGI:5477356]
25. Tfec ENSMUSG00000029553 99 0.762 - 0.762 - - - - transcription factor EC [Source:MGI Symbol;Acc:MGI:1333760]
26. Gys2 ENSMUSG00000030244 18 0.762 - - 0.762 - - - glycogen synthase 2 [Source:MGI Symbol;Acc:MGI:2385254]
27. Gm6169 ENSMUSG00000057762 16 0.761 - - 0.761 - - - predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
28. Gm14947 ENSMUSG00000086452 16 0.761 - - 0.761 - - - predicted gene 14947 [Source:MGI Symbol;Acc:MGI:3642731]
29. Fam46d 4 0.761 - - 0.761 - - - family with sequence similarity 46, member D, transcript variant X1
30. Olfr1505 ENSMUSG00000062314 2 0.761 - - 0.761 - - - olfactory receptor 1505 [Source:MGI Symbol;Acc:MGI:3031339]
31. Gm16542 Gm16542 2 0.761 - - 0.761 - - -
32. Mesp1 ENSMUSG00000030544 3 0.761 - - 0.761 - - - mesoderm posterior 1 [Source:MGI Symbol;Acc:MGI:107785]
33. Gm16028 ENSMUSG00000090252 4 0.761 - - 0.761 - - - predicted gene 16028 [Source:MGI Symbol;Acc:MGI:3801982]
34. C3 ENSMUSG00000024164 24 0.761 - - 0.761 - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
35. Cyp2c70 ENSMUSG00000060613 3 0.761 - - 0.761 - - - cytochrome P450, family 2, subfamily c, polypeptide 70 [Source:MGI Symbol;Acc:MGI:2385878]
36. Crygd ENSMUSG00000067299 3 0.761 - - 0.761 - - - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
37. Krtap5-4 ENSMUSG00000045236 2 0.761 - - 0.761 - - - keratin associated protein 5-4 [Source:MGI Symbol;Acc:MGI:1354758]
38. Alb ENSMUSG00000029368 370 0.761 - - 0.761 - - - albumin [Source:MGI Symbol;Acc:MGI:87991]
39. Gm13236 ENSMUSG00000087513 9 0.76 - - 0.760 - - - predicted gene 13236 [Source:MGI Symbol;Acc:MGI:3705163]
40. Lgmn ENSMUSG00000021190 387 0.759 - - - - 0.759 - legumain [Source:MGI Symbol;Acc:MGI:1330838]
41. 4921514A10Rik ENSMUSG00000097620 20 0.758 - 0.758 - - - - RIKEN cDNA 4921514A10 gene [Source:MGI Symbol;Acc:MGI:3704238]
42. Lilrb4 Lilrb4 13 0.757 - 0.757 - - - -
43. P2rx1 ENSMUSG00000020787 53 0.756 - 0.756 - - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:MGI Symbol;Acc:MGI:1098235]
44. Apoc2 ENSMUSG00000002992 36 0.756 - - 0.756 - - - apolipoprotein C-II [Source:MGI Symbol;Acc:MGI:88054]
45. Spire2 ENSMUSG00000010154 178 0.755 - - 0.755 - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
46. RP23-386C10.2 RP23-386C10.2 51 0.755 - 0.755 - - - -
47. Klb ENSMUSG00000029195 3 0.755 - - 0.755 - - - klotho beta [Source:MGI Symbol;Acc:MGI:1932466]
48. Gm6097 Gm6097 3 0.754 - - 0.754 - - -
49. Gpr179 ENSMUSG00000070337 20 0.754 - - 0.754 - - - G protein-coupled receptor 179 [Source:MGI Symbol;Acc:MGI:2443409]
50. Gmnc ENSMUSG00000068428 7 0.754 - - 0.754 - - - geminin coiled-coil domain containing [Source:MGI Symbol;Acc:MGI:2685452]
51. Zfp42 ENSMUSG00000051176 11 0.754 - 0.754 - - - - zinc finger protein 42 [Source:MGI Symbol;Acc:MGI:99187]
52. Uap1l1 ENSMUSG00000026956 97 0.753 - 0.753 - - - - UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [Source:MGI Symbol;Acc:MGI:2443318]
53. Sprr2f ENSMUSG00000050635 4 0.752 - - 0.752 - - - small proline-rich protein 2F [Source:MGI Symbol;Acc:MGI:1330349]
54. AY512931 ENSMUSG00000066158 48 0.752 - 0.752 - - - - cDNA sequence AY512931 [Source:MGI Symbol;Acc:MGI:3525069]
55. Ccdc81 ENSMUSG00000039391 4 0.752 - - 0.752 - - - coiled-coil domain containing 81 [Source:MGI Symbol;Acc:MGI:1918134]
56. Dmkn ENSMUSG00000060962 5 0.751 - - 0.751 - - - dermokine [Source:MGI Symbol;Acc:MGI:1920962]
57. Sp7 ENSMUSG00000060284 33 0.75 - - 0.750 - - - Sp7 transcription factor 7 [Source:MGI Symbol;Acc:MGI:2153568]
58. Dnah8 ENSMUSG00000033826 7 0.75 - - 0.750 - - - dynein, axonemal, heavy chain 8 [Source:MGI Symbol;Acc:MGI:107714]
59. Acaa1b ENSMUSG00000010651 3 0.75 - - 0.750 - - - acetyl-Coenzyme A acyltransferase 1B [Source:MGI Symbol;Acc:MGI:3605455]
60. Cebpb ENSMUSG00000056501 245 0.749 - - 0.749 - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]
61. Tbxas1 ENSMUSG00000029925 57 0.749 - 0.749 - - - - thromboxane A synthase 1, platelet [Source:MGI Symbol;Acc:MGI:98497]
62. Gm21846 ENSMUSG00000094832 50 0.748 - - 0.748 - - - predicted gene, 21846 [Source:MGI Symbol;Acc:MGI:5434010]
63. Cabp5 ENSMUSG00000005649 14 0.748 - 0.748 - - - - calcium binding protein 5 [Source:MGI Symbol;Acc:MGI:1352746]
64. Zscan25 ENSMUSG00000070420 12 0.748 - 0.748 - - - - zinc finger and SCAN domain containing 25 [Source:MGI Symbol;Acc:MGI:3647079]
65. Gm16861 ENSMUSG00000097397 24 0.748 - - 0.748 - - - predicted gene, 16861 [Source:MGI Symbol;Acc:MGI:4439785]
66. A130006I12Rik ENSMUSG00000069136 6 0.747 - 0.747 - - - - RIKEN cDNA A130006I12 gene [Source:MGI Symbol;Acc:MGI:2441774]
67. Cd200r3 ENSMUSG00000036172 13 0.747 - - 0.747 - - - CD200 receptor 3 [Source:MGI Symbol;Acc:MGI:1921853]
68. Krt18 ENSMUSG00000023043 2166 0.747 - - - 0.747 - - keratin 18 [Source:MGI Symbol;Acc:MGI:96692]
69. Rps12-ps19 ENSMUSG00000082481 30 0.746 - 0.746 - - - - ribosomal protein S12, pseudogene 19 [Source:MGI Symbol;Acc:MGI:3652063]
70. Gm10463 ENSMUSG00000102759 12 0.746 - - 0.746 - - - predicted gene 10463 [Source:MGI Symbol;Acc:MGI:3642170]
71. 4930426L09Rik ENSMUSG00000026736 4 0.745 - - 0.745 - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
72. Il17re ENSMUSG00000043088 116 0.745 - - 0.745 - - - interleukin 17 receptor E [Source:MGI Symbol;Acc:MGI:1889371]
73. Trpc4 ENSMUSG00000027748 105 0.745 - - 0.745 - - - transient receptor potential cation channel, subfamily C, member 4 [Source:MGI Symbol;Acc:MGI:109525]
74. Gata4 ENSMUSG00000021944 1346 0.745 - - 0.745 - - - GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:95664]
75. Gm26538 ENSMUSG00000097507 20 0.745 - - 0.745 - - - predicted gene, 26538 [Source:MGI Symbol;Acc:MGI:5477032]
76. Gm7551 ENSMUSG00000068480 3 0.745 - - 0.745 - - - predicted gene 7551 [Source:MGI Symbol;Acc:MGI:3648704]
77. Fbxl8 ENSMUSG00000033313 40 0.743 - - 0.743 - - - F-box and leucine-rich repeat protein 8 [Source:MGI Symbol;Acc:MGI:1354697]
78. Ahnak2 ENSMUSG00000072812 14 0.743 - 0.743 - - - - AHNAK nucleoprotein 2 [Source:MGI Symbol;Acc:MGI:2144831]
79. Slc7a7 ENSMUSG00000000958 41 0.742 - - 0.742 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 [Source:MGI Symbol;Acc:MGI:1337120]
80. Ccdc68 ENSMUSG00000038903 129 0.741 - 0.741 - - - - coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
81. Gm14253 ENSMUSG00000082321 37 0.74 0.740 - - - - - predicted gene 14253 [Source:MGI Symbol;Acc:MGI:3650994]
82. 6430550D23Rik ENSMUSG00000074646 32 0.74 - - 0.740 - - - RIKEN cDNA 6430550D23 gene [Source:MGI Symbol;Acc:MGI:2443361]
83. Pstpip2 ENSMUSG00000025429, ENSMUSG00000116035 7 0.739 - 0.739 - - - - proline-serine-threonine phosphatase-interacting protein 2 [Source:MGI Symbol;Acc:MGI:1335088]
84. C130050O18Rik ENSMUSG00000044092 7 0.739 - 0.739 - - - - RIKEN cDNA C130050O18 gene [Source:MGI Symbol;Acc:MGI:2442694]
85. Rps13-ps2 ENSMUSG00000069972 13 0.739 - 0.739 - - - - ribosomal protein S13, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3704295]
86. Usp30 ENSMUSG00000029592 469 0.739 - - 0.739 - - - ubiquitin specific peptidase 30 [Source:MGI Symbol;Acc:MGI:2140991]
87. Gm6787 ENSMUSG00000086404 13 0.739 - - 0.739 - - - predicted gene 6787 [Source:MGI Symbol;Acc:MGI:3646481]
88. Clca2 ENSMUSG00000036960 6 0.739 - 0.739 - - - - chloride channel accessory 2 [Source:MGI Symbol;Acc:MGI:2139758]
89. Gm9703 ENSMUSG00000082741 6 0.739 - 0.739 - - - - predicted gene 9703 [Source:MGI Symbol;Acc:MGI:3780110]
90. Slc13a5 ENSMUSG00000020805 6 0.739 - 0.739 - - - - solute carrier family 13 (sodium-dependent citrate transporter), member 5 [Source:MGI Symbol;Acc:MGI:3037150]
91. Ltb4r2 ENSMUSG00000040432 6 0.739 - 0.739 - - - - leukotriene B4 receptor 2 [Source:MGI Symbol;Acc:MGI:1888501]
92. Slc26a10 ENSMUSG00000040441 17 0.738 - - 0.738 - - - solute carrier family 26, member 10 [Source:MGI Symbol;Acc:MGI:2143920]
93. Cd300ld ENSMUSG00000034641 6 0.738 - - 0.738 - - - CD300 molecule like family member d [Source:MGI Symbol;Acc:MGI:2442358]
94. Gm14696 ENSMUSG00000087369 10 0.738 - - 0.738 - - - predicted gene 14696 [Source:MGI Symbol;Acc:MGI:3705257]
95. Spink3 Spink3 30 0.737 - - - 0.737 - -
96. Fbxl7 ENSMUSG00000043556 38 0.736 - - 0.736 - - - F-box and leucine-rich repeat protein 7 [Source:MGI Symbol;Acc:MGI:3052506]
97. Irs3 ENSMUSG00000047182 11 0.736 - - 0.736 - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
98. Gfi1b ENSMUSG00000026815 88 0.735 - 0.735 - - - - growth factor independent 1B [Source:MGI Symbol;Acc:MGI:1276578]
99. Zfp354b ENSMUSG00000020335 56 0.734 - - 0.734 - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
100. Gucy1a3 318 0.733 - 0.733 - - - - guanylate cyclase 1, soluble, alpha 3, transcript variant X1

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA