Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scx

Gene Name Gene ID Reads Annotation
Scx ENSMUSG00000034161 568 scleraxis [Source:MGI Symbol;Acc:MGI:102934]







Genes with expression patterns similar to Scx

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scx ENSMUSG00000034161 568 6 1.000 1.000 1.000 1.000 1.000 1.000 scleraxis [Source:MGI Symbol;Acc:MGI:102934]
2. Neb ENSMUSG00000026950 948 1.557 - - - - 0.742 0.815 nebulin [Source:MGI Symbol;Acc:MGI:97292]
3. Actc1 ENSMUSG00000068614 13555 1.52 - - - - 0.762 0.758 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
4. Myog ENSMUSG00000026459 855 1.486 - - - - 0.717 0.769 myogenin [Source:MGI Symbol;Acc:MGI:97276]
5. Fibin ENSMUSG00000074971 907 1.478 - - - - 0.706 0.772 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
6. Osr1 ENSMUSG00000048387 855 1.468 - - - - 0.736 0.732 odd-skipped related transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344424]
7. Gm5436 ENSMUSG00000042962 199 0.911 0.911 - - - - - predicted pseudogene 5436 [Source:MGI Symbol;Acc:MGI:3643291]
8. Rai2 ENSMUSG00000043518 113 0.91 0.910 - - - - - retinoic acid induced 2 [Source:MGI Symbol;Acc:MGI:1344378]
9. Gm5083 ENSMUSG00000089815 11 0.907 0.907 - - - - - predicted gene 5083 [Source:MGI Symbol;Acc:MGI:3779454]
10. Hist1h2bh ENSMUSG00000114456 25 0.906 0.906 - - - - - histone cluster 1, H2bh [Source:MGI Symbol;Acc:MGI:2448387]
11. Pabpn1l ENSMUSG00000069867 6 0.906 0.906 - - - - - poly(A)binding protein nuclear 1-like [Source:MGI Symbol;Acc:MGI:2685954]
12. 4930577N17Rik ENSMUSG00000087440 9 0.906 0.906 - - - - - RIKEN cDNA 4930577N17 gene [Source:MGI Symbol;Acc:MGI:1914996]
13. Gm16305 ENSMUSG00000085361 7 0.906 0.906 - - - - - predicted gene 16305 [Source:MGI Symbol;Acc:MGI:3826519]
14. Gm12278 ENSMUSG00000086310 5 0.906 0.906 - - - - - predicted gene 12278 [Source:MGI Symbol;Acc:MGI:3650383]
15. Gm26690 ENSMUSG00000097751 7 0.906 0.906 - - - - - predicted gene, 26690 [Source:MGI Symbol;Acc:MGI:5477184]
16. Gm13007 ENSMUSG00000083852 5 0.906 0.906 - - - - - predicted gene 13007 [Source:MGI Symbol;Acc:MGI:3649722]
17. Nefh ENSMUSG00000020396 31 0.902 0.902 - - - - - neurofilament, heavy polypeptide [Source:MGI Symbol;Acc:MGI:97309]
18. C1qtnf2 ENSMUSG00000046491 14 0.901 0.901 - - - - - C1q and tumor necrosis factor related protein 2 [Source:MGI Symbol;Acc:MGI:1916433]
19. Gm12892 ENSMUSG00000083679, ENSMUSG00000116060 11 0.9 0.900 - - - - - predicted gene 12892 [Source:MGI Symbol;Acc:MGI:3649649]
20. Gm1815 Gm1815 49 0.899 0.899 - - - - -
21. Ebi3 ENSMUSG00000003206 34 0.899 0.899 - - - - - Epstein-Barr virus induced gene 3 [Source:MGI Symbol;Acc:MGI:1354171]
22. Noxo1 ENSMUSG00000019320 15 0.899 0.899 - - - - - NADPH oxidase organizer 1 [Source:MGI Symbol;Acc:MGI:1919143]
23. Muc16 ENSMUSG00000109564 14 0.896 0.896 - - - - - mucin 16 [Source:MGI Symbol;Acc:MGI:1920982]
24. Gm10268 ENSMUSG00000066475 14 0.894 0.894 - - - - - predicted gene 10268 [Source:MGI Symbol;Acc:MGI:3642637]
25. Gm12500 ENSMUSG00000056411 17 0.889 0.889 - - - - - predicted gene 12500 [Source:MGI Symbol;Acc:MGI:3650304]
26. Dner ENSMUSG00000036766 209 0.884 0.884 - - - - - delta/notch-like EGF repeat containing [Source:MGI Symbol;Acc:MGI:2152889]
27. 6330403A02Rik 6330403A02Rik 84 0.884 0.884 - - - - -
28. Gm10780 ENSMUSG00000074877 28 0.882 0.882 - - - - - predicted gene 10780 [Source:MGI Symbol;Acc:MGI:3642422]
29. Arx ENSMUSG00000035277 216 0.877 0.877 - - - - - aristaless related homeobox [Source:MGI Symbol;Acc:MGI:1097716]
30. Trp73 ENSMUSG00000029026 14 0.875 0.875 - - - - - transformation related protein 73 [Source:MGI Symbol;Acc:MGI:1336991]
31. Gabrb2 ENSMUSG00000007653 18 0.874 0.874 - - - - - gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620]
32. Ccdc79 Ccdc79 24 0.869 0.869 - - - - -
33. Fam221a ENSMUSG00000047115 190 0.865 0.865 - - - - - family with sequence similarity 221, member A [Source:MGI Symbol;Acc:MGI:2442161]
34. Nxnl2 ENSMUSG00000021396 29 0.86 0.860 - - - - - nucleoredoxin-like 2 [Source:MGI Symbol;Acc:MGI:1922374]
35. Gm13328 ENSMUSG00000081128 29 0.859 0.859 - - - - - predicted gene 13328 [Source:MGI Symbol;Acc:MGI:3651185]
36. Phf19 ENSMUSG00000026873 83 0.856 0.856 - - - - - PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
37. Kcnq1 ENSMUSG00000009545 68 0.855 0.855 - - - - - potassium voltage-gated channel, subfamily Q, member 1 [Source:MGI Symbol;Acc:MGI:108083]
38. Pkn1 ENSMUSG00000057672 59 0.851 0.851 - - - - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
39. 4930579K19Rik ENSMUSG00000051074 42 0.85 0.850 - - - - - RIKEN cDNA 4930579K19 gene [Source:MGI Symbol;Acc:MGI:1923131]
40. Tspan8 ENSMUSG00000034127 107 0.844 0.844 - - - - - tetraspanin 8 [Source:MGI Symbol;Acc:MGI:2384918]
41. Parp8 ENSMUSG00000021725 131 0.835 0.835 - - - - - poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]
42. Gm12346 ENSMUSG00000083899 95 0.831 0.831 - - - - - predicted gene 12346 [Source:MGI Symbol;Acc:MGI:3649810]
43. Nap1l3 ENSMUSG00000055733 142 0.83 0.830 - - - - - nucleosome assembly protein 1-like 3 [Source:MGI Symbol;Acc:MGI:1859565]
44. Kcnb2 ENSMUSG00000092083 169 0.826 0.826 - - - - - potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632]
45. Acot8 ENSMUSG00000017307 64 0.824 0.824 - - - - - acyl-CoA thioesterase 8 [Source:MGI Symbol;Acc:MGI:2158201]
46. Aldh1l1 ENSMUSG00000030088 18 0.824 0.824 - - - - - aldehyde dehydrogenase 1 family, member L1 [Source:MGI Symbol;Acc:MGI:1340024]
47. Ppp1r36 ENSMUSG00000052221 97 0.824 0.824 - - - - - protein phosphatase 1, regulatory subunit 36 [Source:MGI Symbol;Acc:MGI:2684916]
48. A430108G06Rik ENSMUSG00000086851 21 0.823 0.823 - - - - - RIKEN cDNA A430108G06 gene [Source:MGI Symbol;Acc:MGI:2442478]
49. Negr1 ENSMUSG00000040037 312 0.822 0.822 - - - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
50. Cdkl1 ENSMUSG00000020990 57 0.819 0.819 - - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:MGI Symbol;Acc:MGI:1918341]
51. 2900011O08Rik ENSMUSG00000044117 284 0.817 0.817 - - - - - RIKEN cDNA 2900011O08 gene [Source:MGI Symbol;Acc:MGI:1914504]
52. 1810059H22Rik ENSMUSG00000108207 50 0.817 0.817 - - - - - RIKEN cDNA 1810059H22 gene [Source:MGI Symbol;Acc:MGI:1917070]
53. Spink10 ENSMUSG00000044176 93 0.816 0.816 - - - - - serine peptidase inhibitor, Kazal type 10 [Source:MGI Symbol;Acc:MGI:3584533]
54. Grid1 ENSMUSG00000041078 96 0.815 0.815 - - - - - glutamate receptor, ionotropic, delta 1 [Source:MGI Symbol;Acc:MGI:95812]
55. Rnf207 ENSMUSG00000058498 72 0.815 0.815 - - - - - ring finger protein 207 [Source:MGI Symbol;Acc:MGI:2684989]
56. RP23-279M5.3 RP23-279M5.3 61 0.814 0.814 - - - - -
57. Srsf4 ENSMUSG00000028911 20 0.812 0.812 - - - - - serine/arginine-rich splicing factor 4 [Source:MGI Symbol;Acc:MGI:1890577]
58. Rpl21-ps12 ENSMUSG00000058700 44 0.811 0.811 - - - - - ribosomal protein L21, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3648214]
59. Plekho2 ENSMUSG00000050721 516 0.811 0.811 - - - - - pleckstrin homology domain containing, family O member 2 [Source:MGI Symbol;Acc:MGI:2143132]
60. Zfp955b ENSMUSG00000096910 40 0.809 0.809 - - - - - zinc finger protein 955B [Source:MGI Symbol;Acc:MGI:4834573]
61. Gm15270 ENSMUSG00000087400 138 0.807 0.807 - - - - - predicted gene 15270 [Source:MGI Symbol;Acc:MGI:3705149]
62. Zfp773 ENSMUSG00000063535 54 0.795 0.795 - - - - - zinc finger protein 773 [Source:MGI Symbol;Acc:MGI:1923623]
63. Gm12396 ENSMUSG00000056412 174 0.795 0.795 - - - - - predicted gene 12396 [Source:MGI Symbol;Acc:MGI:3649201]
64. L1td1 ENSMUSG00000087166 81 0.793 0.793 - - - - - LINE-1 type transposase domain containing 1 [Source:MGI Symbol;Acc:MGI:3578435]
65. Gm15445 ENSMUSG00000085311 77 0.793 0.793 - - - - - predicted gene 15445 [Source:MGI Symbol;Acc:MGI:3707341]
66. Muc1 ENSMUSG00000042784 30 0.792 0.792 - - - - - mucin 1, transmembrane [Source:MGI Symbol;Acc:MGI:97231]
67. Gm10020 ENSMUSG00000057262 87 0.789 0.789 - - - - - predicted pseudogene 10020 [Source:MGI Symbol;Acc:MGI:3642192]
68. Ttn ENSMUSG00000051747 3015 0.787 - - - - - 0.787 titin [Source:MGI Symbol;Acc:MGI:98864]
69. Per2 ENSMUSG00000055866 255 0.787 0.787 - - - - - period circadian clock 2 [Source:MGI Symbol;Acc:MGI:1195265]
70. Zswim1 ENSMUSG00000017764 460 0.785 0.785 - - - - - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
71. Rpl31-ps17 ENSMUSG00000072255 48 0.784 0.784 - - - - - ribosomal protein L31, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3648194]
72. Dok2 ENSMUSG00000022102 193 0.784 0.784 - - - - - docking protein 2 [Source:MGI Symbol;Acc:MGI:1332623]
73. Atf3 ENSMUSG00000026628 91 0.779 0.779 - - - - - activating transcription factor 3 [Source:MGI Symbol;Acc:MGI:109384]
74. Bin2 ENSMUSG00000098112 317 0.777 - 0.777 - - - - bridging integrator 2 [Source:MGI Symbol;Acc:MGI:3611448]
75. Rnf223 ENSMUSG00000110404 72 0.777 0.777 - - - - - ring finger 223 [Source:MGI Symbol;Acc:MGI:3588193]
76. Gm15538 ENSMUSG00000083579 231 0.776 0.776 - - - - - predicted gene 15538 [Source:MGI Symbol;Acc:MGI:3782986]
77. Pcdhb22 ENSMUSG00000073591 244 0.768 0.768 - - - - - protocadherin beta 22 [Source:MGI Symbol;Acc:MGI:2136760]
78. Acadvl ENSMUSG00000018574 78 0.761 0.761 - - - - - acyl-Coenzyme A dehydrogenase, very long chain [Source:MGI Symbol;Acc:MGI:895149]
79. Vwa2 ENSMUSG00000025082 83 0.76 0.760 - - - - - von Willebrand factor A domain containing 2 [Source:MGI Symbol;Acc:MGI:2684334]
80. Rps12-ps5 ENSMUSG00000081565 43 0.759 0.759 - - - - - ribosomal protein S12, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3644977]
81. Papss2 ENSMUSG00000024899 76 0.756 0.756 - - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:MGI Symbol;Acc:MGI:1330223]
82. Lrrc20 ENSMUSG00000037151 208 0.754 0.754 - - - - - leucine rich repeat containing 20 [Source:MGI Symbol;Acc:MGI:2387182]
83. Fam78a ENSMUSG00000050592 122 0.751 0.751 - - - - - family with sequence similarity 78, member A [Source:MGI Symbol;Acc:MGI:2443569]
84. Apobec2 ENSMUSG00000040694, ENSMUSG00000116086 86 0.749 - - - - - 0.749 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 [Source:MGI Symbol;Acc:MGI:1343178]
85. Adamts4 ENSMUSG00000006403 130 0.749 0.749 - - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
86. Gm23553 ENSMUSG00000088442 31 0.747 0.747 - - - - - predicted gene, 23553 [Source:MGI Symbol;Acc:MGI:5453330]
87. Hic1 ENSMUSG00000043099 2437 0.747 - - - - 0.747 - hypermethylated in cancer 1 [Source:MGI Symbol;Acc:MGI:1338010]
88. Siglec1 ENSMUSG00000027322 95 0.743 0.743 - - - - - sialic acid binding Ig-like lectin 1, sialoadhesin [Source:MGI Symbol;Acc:MGI:99668]
89. Pmm1 ENSMUSG00000022474 314 0.743 0.743 - - - - - phosphomannomutase 1 [Source:MGI Symbol;Acc:MGI:1353418]
90. Nav2 ENSMUSG00000052512 2272 0.738 0.738 - - - - - neuron navigator 2 [Source:MGI Symbol;Acc:MGI:2183691]
91. Fads3 ENSMUSG00000024664 192 0.737 - 0.737 - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
92. Rel ENSMUSG00000020275 25 0.735 0.735 - - - - - reticuloendotheliosis oncogene [Source:MGI Symbol;Acc:MGI:97897]
93. Pink1 ENSMUSG00000028756 916 0.734 0.734 - - - - - PTEN induced putative kinase 1 [Source:MGI Symbol;Acc:MGI:1916193]
94. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.733 - 0.733 - - - - autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
95. Igsf11 ENSMUSG00000022790 190 0.732 0.732 - - - - - immunoglobulin superfamily, member 11 [Source:MGI Symbol;Acc:MGI:2388477]
96. Zfp459 ENSMUSG00000055560 303 0.732 0.732 - - - - - zinc finger protein 459 [Source:MGI Symbol;Acc:MGI:3040701]
97. Epor ENSMUSG00000006235 117 0.731 0.731 - - - - - erythropoietin receptor [Source:MGI Symbol;Acc:MGI:95408]
98. Mc2r ENSMUSG00000045569 124 0.729 0.729 - - - - - melanocortin 2 receptor [Source:MGI Symbol;Acc:MGI:96928]
99. Smim1 ENSMUSG00000078350 279 0.729 0.729 - - - - - small integral membrane protein 1 [Source:MGI Symbol;Acc:MGI:1916109]
100. Sfxn3 ENSMUSG00000025212 825 0.728 - 0.728 - - - - sideroflexin 3 [Source:MGI Symbol;Acc:MGI:2137679]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA