Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scube3

Gene Name Gene ID Reads Annotation
Scube3 ENSMUSG00000038677 1059 signal peptide, CUB domain, EGF-like 3 [Source:MGI Symbol;Acc:MGI:3045253]







Genes with expression patterns similar to Scube3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scube3 ENSMUSG00000038677 1059 6 1.000 1.000 1.000 1.000 1.000 1.000 signal peptide, CUB domain, EGF-like 3 [Source:MGI Symbol;Acc:MGI:3045253]
2. Galc ENSMUSG00000021003 662 0.961 - 0.961 - - - - galactosylceramidase [Source:MGI Symbol;Acc:MGI:95636]
3. Gm10110 ENSMUSG00000062093 706 0.955 - 0.955 - - - - predicted gene 10110 [Source:MGI Symbol;Acc:MGI:3641718]
4. Adar ENSMUSG00000027951 1612 0.91 - 0.910 - - - - adenosine deaminase, RNA-specific [Source:MGI Symbol;Acc:MGI:1889575]
5. Nr4a2 ENSMUSG00000026826 594 0.888 - 0.888 - - - - nuclear receptor subfamily 4, group A, member 2 [Source:MGI Symbol;Acc:MGI:1352456]
6. Wdfy1 ENSMUSG00000073643 3020 0.887 - 0.887 - - - - WD repeat and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:1916618]
7. C2cd3 ENSMUSG00000047248 1181 0.882 - 0.882 - - - - C2 calcium-dependent domain containing 3 [Source:MGI Symbol;Acc:MGI:2142166]
8. Cmip ENSMUSG00000034390 2822 0.871 - 0.871 - - - - c-Maf inducing protein [Source:MGI Symbol;Acc:MGI:1921690]
9. Ercc6l2 ENSMUSG00000021470 1300 0.865 - 0.865 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 [Source:MGI Symbol;Acc:MGI:1923501]
10. Bin1 ENSMUSG00000024381 2782 0.864 - 0.864 - - - - bridging integrator 1 [Source:MGI Symbol;Acc:MGI:108092]
11. Eci1 ENSMUSG00000024132 1403 0.864 - 0.864 - - - - enoyl-Coenzyme A delta isomerase 1 [Source:MGI Symbol;Acc:MGI:94871]
12. Lig3 ENSMUSG00000020697 1227 0.863 - 0.863 - - - - ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]
13. Tbx5 ENSMUSG00000018263 655 0.852 - 0.852 - - - - T-box 5 [Source:MGI Symbol;Acc:MGI:102541]
14. Tcf20 ENSMUSG00000041852 761 0.842 - 0.842 - - - - transcription factor 20 [Source:MGI Symbol;Acc:MGI:108399]
15. Nup153 ENSMUSG00000021374 1803 0.837 - 0.837 - - - - nucleoporin 153 [Source:MGI Symbol;Acc:MGI:2385621]
16. Wdr36 ENSMUSG00000038299 2000 0.836 - 0.836 - - - - WD repeat domain 36 [Source:MGI Symbol;Acc:MGI:1917819]
17. Bace1 ENSMUSG00000032086 1360 0.835 - 0.835 - - - - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
18. Sgol1 1886 0.83 - 0.830 - - - - shugoshin-like 1 (S. pombe), transcript variant X2
19. Spop ENSMUSG00000057522 1819 0.821 - 0.821 - - - - speckle-type POZ protein [Source:MGI Symbol;Acc:MGI:1343085]
20. S100pbp ENSMUSG00000040928 2481 0.817 - 0.817 - - - - S100P binding protein [Source:MGI Symbol;Acc:MGI:1921898]
21. Hars ENSMUSG00000001380 2241 0.801 - 0.801 - - - - histidyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:108087]
22. Cflar ENSMUSG00000026031 1594 0.797 - 0.797 - - - - CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
23. Usp1 ENSMUSG00000028560 6559 0.786 - 0.786 - - - - ubiquitin specific peptidase 1 [Source:MGI Symbol;Acc:MGI:2385198]
24. Shroom3 ENSMUSG00000029381 2016 0.774 - 0.774 - - - - shroom family member 3 [Source:MGI Symbol;Acc:MGI:1351655]
25. Smc4 ENSMUSG00000034349 7290 0.774 - 0.774 - - - - structural maintenance of chromosomes 4 [Source:MGI Symbol;Acc:MGI:1917349]
26. Zfp809 ENSMUSG00000057982 230 0.771 - - - - 0.771 - zinc finger protein 809 [Source:MGI Symbol;Acc:MGI:2143362]
27. Scamp3 ENSMUSG00000028049 1569 0.77 - 0.770 - - - - secretory carrier membrane protein 3 [Source:MGI Symbol;Acc:MGI:1346346]
28. Mrpl44 ENSMUSG00000026248 1593 0.769 - - - - 0.769 - mitochondrial ribosomal protein L44 [Source:MGI Symbol;Acc:MGI:1916413]
29. Htatsf1 ENSMUSG00000067873 3155 0.767 - 0.767 - - - - HIV TAT specific factor 1 [Source:MGI Symbol;Acc:MGI:1919709]
30. Calu ENSMUSG00000029767 4381 0.765 - 0.765 - - - - calumenin [Source:MGI Symbol;Acc:MGI:1097158]
31. Prr12 ENSMUSG00000046574 4381 0.761 - 0.761 - - - - proline rich 12 [Source:MGI Symbol;Acc:MGI:2679002]
32. Atp6v0e ENSMUSG00000015575 2494 0.757 - 0.757 - - - - ATPase, H+ transporting, lysosomal V0 subunit E [Source:MGI Symbol;Acc:MGI:1328318]
33. Atp5d ENSMUSG00000003072 10613 0.757 - 0.757 - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Source:MGI Symbol;Acc:MGI:1913293]
34. Kras ENSMUSG00000030265 3040 0.757 - 0.757 - - - - Kirsten rat sarcoma viral oncogene homolog [Source:MGI Symbol;Acc:MGI:96680]
35. Mrps26 ENSMUSG00000037740 1834 0.75 - 0.750 - - - - mitochondrial ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1333830]
36. Upp2 ENSMUSG00000026839 138 0.745 - - - - 0.745 - uridine phosphorylase 2 [Source:MGI Symbol;Acc:MGI:1923904]
37. Per1 ENSMUSG00000020893 285 0.741 - - - - 0.741 - period circadian clock 1 [Source:MGI Symbol;Acc:MGI:1098283]
38. Zzz3 ENSMUSG00000039068 2399 0.734 - 0.734 - - - - zinc finger, ZZ domain containing 3 [Source:MGI Symbol;Acc:MGI:1920453]
39. Uggt1 ENSMUSG00000037470 1598 0.732 - - - - 0.732 - UDP-glucose glycoprotein glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443162]
40. Tmem55a 4303 0.73 0.730 - - - - - transmembrane protein 55A
41. Mtmr6 ENSMUSG00000021987 2727 0.721 - 0.721 - - - - myotubularin related protein 6 [Source:MGI Symbol;Acc:MGI:2145637]
42. Gm15954 Gm15954 49 0.72 - 0.720 - - - -
43. Eef1a2 ENSMUSG00000016349 41 0.719 - 0.719 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
44. Ccr5 ENSMUSG00000079227 87 0.719 - 0.719 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
45. Gm26869 ENSMUSG00000097879 104 0.718 - 0.718 - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
46. Zfp617 ENSMUSG00000066880 2412 0.718 - 0.718 - - - - zinc finger protein 617 [Source:MGI Symbol;Acc:MGI:2684459]
47. Celf3 ENSMUSG00000028137 141 0.718 - 0.718 - - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
48. Ctla2b ENSMUSG00000074874 66 0.718 - 0.718 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
49. BC027582 BC027582 61 0.718 - 0.718 - - - -
50. Tbkbp1 ENSMUSG00000038517 478 0.718 - - - - 0.718 - TBK1 binding protein 1 [Source:MGI Symbol;Acc:MGI:1920424]
51. Cenpe ENSMUSG00000045328 4221 0.716 - 0.716 - - - - centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
52. Snora23 ENSMUSG00000064451 53 0.716 - 0.716 - - - - small nucleolar RNA, H/ACA box 23 [Source:MGI Symbol;Acc:MGI:3819494]
53. Gm13033 ENSMUSG00000083816 71 0.714 - 0.714 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
54. Lef1 ENSMUSG00000027985 1968 0.714 0.714 - - - - - lymphoid enhancer binding factor 1 [Source:MGI Symbol;Acc:MGI:96770]
55. Slc33a1 ENSMUSG00000027822 642 0.714 - - - - 0.714 - solute carrier family 33 (acetyl-CoA transporter), member 1 [Source:MGI Symbol;Acc:MGI:1332247]
56. Ctnnbip1 ENSMUSG00000028988 3409 0.713 - 0.713 - - - - catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
57. St3gal1 ENSMUSG00000013846 5987 0.712 - 0.712 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:MGI Symbol;Acc:MGI:98304]
58. Crispld2 ENSMUSG00000031825 4346 0.712 - 0.712 - - - - cysteine-rich secretory protein LCCL domain containing 2 [Source:MGI Symbol;Acc:MGI:1926142]
59. Cdc20 ENSMUSG00000006398 2833 0.712 - 0.712 - - - - cell division cycle 20 [Source:MGI Symbol;Acc:MGI:1859866]
60. Stc2 ENSMUSG00000020303 138 0.71 - 0.710 - - - - stanniocalcin 2 [Source:MGI Symbol;Acc:MGI:1316731]
61. Lyrm9 ENSMUSG00000072640 288 0.709 - - - - 0.709 - LYR motif containing 9 [Source:MGI Symbol;Acc:MGI:1913524]
62. Sun2 ENSMUSG00000042524 1055 0.709 0.709 - - - - - Sad1 and UNC84 domain containing 2 [Source:MGI Symbol;Acc:MGI:2443011]
63. Zfp799 ENSMUSG00000095253 1352 0.709 - - - - 0.709 - zinc finger protein 799 [Source:MGI Symbol;Acc:MGI:2443934]
64. Thsd1 ENSMUSG00000031480 416 0.707 - 0.707 - - - - thrombospondin, type I, domain 1 [Source:MGI Symbol;Acc:MGI:1929096]
65. Pex6 ENSMUSG00000002763 490 0.707 - - - - 0.707 - peroxisomal biogenesis factor 6 [Source:MGI Symbol;Acc:MGI:2385054]
66. Zfp143 ENSMUSG00000061079 2082 0.707 - - - - 0.707 - zinc finger protein 143 [Source:MGI Symbol;Acc:MGI:1277969]
67. Pls1 ENSMUSG00000049493 175 0.705 - 0.705 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
68. Stim1 ENSMUSG00000030987 220 0.705 - 0.705 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
69. Gm14227 ENSMUSG00000082596 93 0.704 - 0.704 - - - - predicted gene 14227 [Source:MGI Symbol;Acc:MGI:3649437]
70. Rep15 ENSMUSG00000040121 131 0.704 - 0.704 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
71. Pld1 ENSMUSG00000027695 229 0.704 - 0.704 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
72. Terf1 ENSMUSG00000025925 484 0.704 - - - - 0.704 - telomeric repeat binding factor 1 [Source:MGI Symbol;Acc:MGI:109634]
73. Gata5 ENSMUSG00000015627 998 0.704 - 0.704 - - - - GATA binding protein 5 [Source:MGI Symbol;Acc:MGI:109497]
74. Pes1 ENSMUSG00000020430 4080 0.703 - - - - 0.703 - pescadillo ribosomal biogenesis factor 1 [Source:MGI Symbol;Acc:MGI:1890613]
75. Mcmdc2 ENSMUSG00000046101 117 0.703 - 0.703 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
76. Mlycd ENSMUSG00000074064 268 0.703 - 0.703 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
77. Alx4 ENSMUSG00000040310 434 0.703 - - 0.703 - - - aristaless-like homeobox 4 [Source:MGI Symbol;Acc:MGI:108359]
78. Ninj1 ENSMUSG00000037966 493 0.702 - 0.702 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
79. Lad1 ENSMUSG00000041782 339 0.702 - 0.702 - - - - ladinin [Source:MGI Symbol;Acc:MGI:109343]
80. Sag ENSMUSG00000056055 914 0.702 - - - - 0.702 - S-antigen, retina and pineal gland (arrestin) [Source:MGI Symbol;Acc:MGI:98227]
81. Gm10718 ENSMUSG00000095186 877 0.701 - - - - 0.701 - predicted gene 10718 [Source:MGI Symbol;Acc:MGI:3642028]
82. Clip3 ENSMUSG00000013921 4769 0.7 - 0.700 - - - - CAP-GLY domain containing linker protein 3 [Source:MGI Symbol;Acc:MGI:1923936]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA