Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scube1

Gene Name Gene ID Reads Annotation
Scube1 ENSMUSG00000016763 1149 signal peptide, CUB domain, EGF-like 1 [Source:MGI Symbol;Acc:MGI:1890616]







Genes with expression patterns similar to Scube1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scube1 ENSMUSG00000016763 1149 6 1.000 1.000 1.000 1.000 1.000 1.000 signal peptide, CUB domain, EGF-like 1 [Source:MGI Symbol;Acc:MGI:1890616]
2. Rbpms2 ENSMUSG00000032387 1488 1.62 - 0.913 - - - 0.707 RNA binding protein with multiple splicing 2 [Source:MGI Symbol;Acc:MGI:1919223]
3. Kxd1 ENSMUSG00000055553 1368 1.613 - 0.825 - - - 0.788 KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI:1922870]
4. Ado ENSMUSG00000057134, ENSMUSG00000116486 2945 1.609 - 0.793 - - - 0.816 2-aminoethanethiol (cysteamine) dioxygenase [Source:MGI Symbol;Acc:MGI:2685083]
5. Ptpra ENSMUSG00000027303 1976 1.59 - 0.857 - - - 0.733 protein tyrosine phosphatase, receptor type, A [Source:MGI Symbol;Acc:MGI:97808]
6. Kcnk2 ENSMUSG00000037624 670 1.524 - 0.791 - 0.733 - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
7. Ralb ENSMUSG00000004451 1130 1.478 - - 0.732 - - 0.746 v-ral simian leukemia viral oncogene B [Source:MGI Symbol;Acc:MGI:1927244]
8. Eif2ak4 ENSMUSG00000005102 763 0.929 - - - - - 0.929 eukaryotic translation initiation factor 2 alpha kinase 4 [Source:MGI Symbol;Acc:MGI:1353427]
9. Bambi ENSMUSG00000024232 1106 0.925 - 0.925 - - - - BMP and activin membrane-bound inhibitor [Source:MGI Symbol;Acc:MGI:1915260]
10. Brk1 ENSMUSG00000033940 5215 0.922 - 0.922 - - - - BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:MGI Symbol;Acc:MGI:1915406]
11. Fuca2 ENSMUSG00000019810 864 0.919 - 0.919 - - - - fucosidase, alpha-L- 2, plasma [Source:MGI Symbol;Acc:MGI:1914098]
12. Eps8l2 ENSMUSG00000025504 185 0.918 - - - - - 0.918 EPS8-like 2 [Source:MGI Symbol;Acc:MGI:2138828]
13. Rnd3 ENSMUSG00000017144 2580 0.914 - 0.914 - - - - Rho family GTPase 3 [Source:MGI Symbol;Acc:MGI:1921444]
14. Commd3 ENSMUSG00000051154 2256 0.906 - 0.906 - - - - COMM domain containing 3 [Source:MGI Symbol;Acc:MGI:88218]
15. Fgfr2 ENSMUSG00000030849 6038 0.904 - 0.904 - - - - fibroblast growth factor receptor 2 [Source:MGI Symbol;Acc:MGI:95523]
16. Arfrp1 ENSMUSG00000038671 2311 0.904 - 0.904 - - - - ADP-ribosylation factor related protein 1 [Source:MGI Symbol;Acc:MGI:1923938]
17. Dtnb ENSMUSG00000071454 946 0.903 - - - - - 0.903 dystrobrevin, beta [Source:MGI Symbol;Acc:MGI:1203728]
18. Hmg20b ENSMUSG00000020232 3154 0.898 - 0.898 - - - - high mobility group 20B [Source:MGI Symbol;Acc:MGI:1341190]
19. Ano6 ENSMUSG00000064210 5663 0.895 - 0.895 - - - - anoctamin 6 [Source:MGI Symbol;Acc:MGI:2145890]
20. Arrb2 ENSMUSG00000060216 1401 0.893 - 0.893 - - - - arrestin, beta 2 [Source:MGI Symbol;Acc:MGI:99474]
21. Rabgef1 ENSMUSG00000025340 419 0.893 - - - - - 0.893 RAB guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:1929459]
22. Pkp4 ENSMUSG00000026991 2294 0.889 - 0.889 - - - - plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
23. Nup155 ENSMUSG00000022142 3484 0.889 - 0.889 - - - - nucleoporin 155 [Source:MGI Symbol;Acc:MGI:2181182]
24. Nudt11 ENSMUSG00000073295 757 0.888 - - - - - 0.888 nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
25. Gm15800 4388 0.886 - 0.886 - - - - predicted gene 15800, transcript variant X9
26. Rbbp5 ENSMUSG00000026439 3721 0.884 - 0.884 - - - - retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit [Source:MGI Symbol;Acc:MGI:1918367]
27. Tmem256 ENSMUSG00000070394 3284 0.874 - 0.874 - - - - transmembrane protein 256 [Source:MGI Symbol;Acc:MGI:1916436]
28. Tlr3 ENSMUSG00000031639 152 0.871 - 0.871 - - - - toll-like receptor 3 [Source:MGI Symbol;Acc:MGI:2156367]
29. Foxj2 ENSMUSG00000003154 307 0.87 - 0.870 - - - - forkhead box J2 [Source:MGI Symbol;Acc:MGI:1926805]
30. Cfp ENSMUSG00000001128 267 0.87 - 0.870 - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
31. Snx14 ENSMUSG00000032422 399 0.87 - - - - - 0.870 sorting nexin 14 [Source:MGI Symbol;Acc:MGI:2155664]
32. Zfp202 ENSMUSG00000025602 368 0.869 - 0.869 - - - - zinc finger protein 202 [Source:MGI Symbol;Acc:MGI:1933401]
33. Katnal2 ENSMUSG00000025420 261 0.869 - 0.869 - - - - katanin p60 subunit A-like 2 [Source:MGI Symbol;Acc:MGI:1924234]
34. Akap12 ENSMUSG00000038587 5615 0.869 - 0.869 - - - - A kinase (PRKA) anchor protein (gravin) 12 [Source:MGI Symbol;Acc:MGI:1932576]
35. 2700097O09Rik ENSMUSG00000062198 1282 0.868 - - - - - 0.868 RIKEN cDNA 2700097O09 gene [Source:MGI Symbol;Acc:MGI:1919908]
36. Scn8a ENSMUSG00000023033 445 0.868 - 0.868 - - - - sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
37. Gne ENSMUSG00000028479 439 0.867 - 0.867 - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:MGI Symbol;Acc:MGI:1354951]
38. Snca ENSMUSG00000025889 420 0.867 - 0.867 - - - - synuclein, alpha [Source:MGI Symbol;Acc:MGI:1277151]
39. Itprip 468 0.867 - 0.867 - - - - inositol 1,4,5-triphosphate receptor interacting protein, transcript variant X2
40. Diap2 Diap2 297 0.866 - - - - - 0.866
41. Dus3l ENSMUSG00000007603 1071 0.866 - 0.866 - - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2147092]
42. Cat ENSMUSG00000027187 4538 0.865 - 0.865 - - - - catalase [Source:MGI Symbol;Acc:MGI:88271]
43. Kcnq5 ENSMUSG00000028033 573 0.865 - 0.865 - - - - potassium voltage-gated channel, subfamily Q, member 5 [Source:MGI Symbol;Acc:MGI:1924937]
44. Aftph ENSMUSG00000049659 672 0.865 - 0.865 - - - - aftiphilin [Source:MGI Symbol;Acc:MGI:1923012]
45. Cacna1h ENSMUSG00000024112 564 0.865 - 0.865 - - - - calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:MGI Symbol;Acc:MGI:1928842]
46. Endov ENSMUSG00000039850 3015 0.864 - 0.864 - - - - endonuclease V [Source:MGI Symbol;Acc:MGI:2444688]
47. Zfp511 ENSMUSG00000025470 527 0.864 - 0.864 - - - - zinc finger protein 511 [Source:MGI Symbol;Acc:MGI:1917002]
48. 2600006K01Rik ENSMUSG00000039798 486 0.864 - - - - - 0.864 RIKEN cDNA 2600006K01 gene [Source:MGI Symbol;Acc:MGI:1917569]
49. Gm25190 ENSMUSG00000093404 417 0.864 - 0.864 - - - - predicted gene, 25190 [Source:MGI Symbol;Acc:MGI:5454967]
50. Eri1 ENSMUSG00000031527 2839 0.864 - 0.864 - - - - exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:1914526]
51. Pitpnb ENSMUSG00000050017 3763 0.864 - 0.864 - - - - phosphatidylinositol transfer protein, beta [Source:MGI Symbol;Acc:MGI:1927542]
52. Nrf1 ENSMUSG00000058440 3663 0.863 - 0.863 - - - - nuclear respiratory factor 1 [Source:MGI Symbol;Acc:MGI:1332235]
53. Tmem107 ENSMUSG00000020895 490 0.863 - 0.863 - - - - transmembrane protein 107 [Source:MGI Symbol;Acc:MGI:1914160]
54. Mars ENSMUSG00000040354 3385 0.861 - - - - - 0.861 methionine-tRNA synthetase [Source:MGI Symbol;Acc:MGI:1345633]
55. Pdia5 ENSMUSG00000022844 1610 0.861 - 0.861 - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
56. Cldn23 ENSMUSG00000055976 75 0.861 - - - - - 0.861 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
57. Tmem230 ENSMUSG00000027341 995 0.86 - 0.860 - - - - transmembrane protein 230 [Source:MGI Symbol;Acc:MGI:1917862]
58. Ccdc14 ENSMUSG00000022833 847 0.86 - 0.860 - - - - coiled-coil domain containing 14 [Source:MGI Symbol;Acc:MGI:2443448]
59. Trim56 ENSMUSG00000043279 682 0.86 - 0.860 - - - - tripartite motif-containing 56 [Source:MGI Symbol;Acc:MGI:2685298]
60. Slc25a51 ENSMUSG00000045973 4292 0.859 - 0.859 - - - - solute carrier family 25, member 51 [Source:MGI Symbol;Acc:MGI:2684984]
61. Vps33a ENSMUSG00000029434 711 0.859 - 0.859 - - - - VPS33A CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1924823]
62. A830005F24Rik ENSMUSG00000053181 54 0.858 - - - - - 0.858 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
63. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.858 - - - - - 0.858 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
64. Gyk Gyk 394 0.858 - 0.858 - - - -
65. Nlrc3 ENSMUSG00000049871 675 0.858 - 0.858 - - - - NLR family, CARD domain containing 3 [Source:MGI Symbol;Acc:MGI:2444070]
66. Ppapdc1b Ppapdc1b 807 0.858 - 0.858 - - - -
67. Gm13613 ENSMUSG00000086819 36 0.858 - - - - - 0.858 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
68. Ascl2 ENSMUSG00000009248 66 0.858 - - - - - 0.858 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
69. Fdx1l ENSMUSG00000079677 1163 0.858 - 0.858 - - - - ferredoxin 1-like [Source:MGI Symbol;Acc:MGI:1915415]
70. Eral1 ENSMUSG00000020832 1059 0.858 - 0.858 - - - - Era (G-protein)-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1889295]
71. Snord15b ENSMUSG00000064966 96 0.858 - - - - - 0.858 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
72. Gm23458 ENSMUSG00000065191 51 0.857 - - - - - 0.857 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
73. Fam172a ENSMUSG00000064138 1125 0.857 - 0.857 - - - - family with sequence similarity 172, member A [Source:MGI Symbol;Acc:MGI:1915925]
74. Gm13362 ENSMUSG00000086418 31 0.857 - - - - - 0.857 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
75. Cdk10 ENSMUSG00000033862 738 0.857 - - - - - 0.857 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
76. Lama5 ENSMUSG00000015647 351 0.857 - - - - - 0.857 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
77. Gm26793 ENSMUSG00000096999 40 0.857 - - - - - 0.857 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
78. 4930447F04Rik ENSMUSG00000031182 31 0.857 - - - - - 0.857 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
79. Gm5250 ENSMUSG00000069620 31 0.857 - - - - - 0.857 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
80. Brms1l ENSMUSG00000012076 1022 0.857 - 0.857 - - - - breast cancer metastasis-suppressor 1-like [Source:MGI Symbol;Acc:MGI:1196337]
81. Palld ENSMUSG00000058056 1488 0.856 - - - - - 0.856 palladin, cytoskeletal associated protein [Source:MGI Symbol;Acc:MGI:1919583]
82. Gm9083 ENSMUSG00000083033 141 0.856 - - - - - 0.856 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
83. Slc7a11 ENSMUSG00000027737 244 0.856 - - - - - 0.856 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 [Source:MGI Symbol;Acc:MGI:1347355]
84. 1810019D21Rik ENSMUSG00000086390 50 0.856 - - - - - 0.856 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
85. Panx2 ENSMUSG00000058441 42 0.856 - - - - - 0.856 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
86. Wipf2 ENSMUSG00000038013 2600 0.856 - - - - - 0.856 WAS/WASL interacting protein family, member 2 [Source:MGI Symbol;Acc:MGI:1924462]
87. Fbxl3 ENSMUSG00000022124 1375 0.855 - 0.855 - - - - F-box and leucine-rich repeat protein 3 [Source:MGI Symbol;Acc:MGI:1354702]
88. Pms2 ENSMUSG00000079109 883 0.855 - 0.855 - - - - PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]
89. Parp16 ENSMUSG00000032392 195 0.855 - - - - - 0.855 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
90. Zic2 ENSMUSG00000061524 472 0.855 - - - - - 0.855 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
91. Qsox2 ENSMUSG00000036327 342 0.854 - - - - - 0.854 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
92. Osbpl1a ENSMUSG00000044252 1204 0.854 - 0.854 - - - - oxysterol binding protein-like 1A [Source:MGI Symbol;Acc:MGI:1927551]
93. Lpar6 ENSMUSG00000033446 911 0.854 - 0.854 - - - - lysophosphatidic acid receptor 6 [Source:MGI Symbol;Acc:MGI:1914418]
94. Hspb1 ENSMUSG00000004951 1136 0.854 - 0.854 - - - - heat shock protein 1 [Source:MGI Symbol;Acc:MGI:96240]
95. Insl6 ENSMUSG00000050957 119 0.854 - - - - - 0.854 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
96. Mospd3 ENSMUSG00000037221 1127 0.853 - 0.853 - - - - motile sperm domain containing 3 [Source:MGI Symbol;Acc:MGI:1916179]
97. Gm12024 ENSMUSG00000081101 53 0.853 - - - - - 0.853 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
98. Pcsk7 ENSMUSG00000035382 1328 0.853 - 0.853 - - - - proprotein convertase subtilisin/kexin type 7 [Source:MGI Symbol;Acc:MGI:107421]
99. Snta1 ENSMUSG00000027488 128 0.853 - - - - - 0.853 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
100. Rpl9 ENSMUSG00000047215 1086 0.853 - - - - - 0.853 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]

There are 428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA