Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scrn1

Gene Name Gene ID Reads Annotation
Scrn1 ENSMUSG00000019124 916 secernin 1 [Source:MGI Symbol;Acc:MGI:1917188]







Genes with expression patterns similar to Scrn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scrn1 ENSMUSG00000019124 916 6 1.000 1.000 1.000 1.000 1.000 1.000 secernin 1 [Source:MGI Symbol;Acc:MGI:1917188]
2. Hspa12a ENSMUSG00000025092 922 0.812 - 0.812 - - - - heat shock protein 12A [Source:MGI Symbol;Acc:MGI:1920692]
3. D930028M14Rik ENSMUSG00000074274 452 0.804 0.804 - - - - - RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
4. Elavl3 ENSMUSG00000003410 2830 0.796 0.796 - - - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
5. Gm12577 ENSMUSG00000083834 78 0.789 - 0.789 - - - - predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
6. Mapt ENSMUSG00000018411 1834 0.788 0.788 - - - - - microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
7. 1700008O03Rik ENSMUSG00000008028 235 0.776 - 0.776 - - - - RIKEN cDNA 1700008O03 gene [Source:MGI Symbol;Acc:MGI:1916599]
8. Tubb3 ENSMUSG00000062380 9211 0.771 0.771 - - - - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
9. Gm12657 ENSMUSG00000063314 79 0.769 - 0.769 - - - - predicted gene 12657 [Source:MGI Symbol;Acc:MGI:3651714]
10. Ube2ql1 ENSMUSG00000052981 312 0.768 - 0.768 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
11. St18 ENSMUSG00000033740 408 0.766 0.766 - - - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
12. Gm12191 ENSMUSG00000083061 359 0.763 - 0.763 - - - - predicted gene 12191 [Source:MGI Symbol;Acc:MGI:3651293]
13. Ina ENSMUSG00000034336 3835 0.759 0.759 - - - - - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
14. Lmtk3 ENSMUSG00000062044 371 0.759 - 0.759 - - - - lemur tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:3039582]
15. Gm10155 ENSMUSG00000066180 21 0.759 - 0.759 - - - - predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
16. Myh7 ENSMUSG00000053093 156 0.757 0.757 - - - - - myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
17. Rtn1 ENSMUSG00000021087 2547 0.756 0.756 - - - - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
18. Lrrc8e ENSMUSG00000046589 169 0.755 - 0.755 - - - - leucine rich repeat containing 8 family, member E [Source:MGI Symbol;Acc:MGI:1919517]
19. Kcnh2 ENSMUSG00000038319 806 0.755 - 0.755 - - - - potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
20. Scg3 ENSMUSG00000032181 445 0.754 0.754 - - - - - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
21. Chga ENSMUSG00000021194 199 0.754 0.754 - - - - - chromogranin A [Source:MGI Symbol;Acc:MGI:88394]
22. Gm22767 ENSMUSG00000088990 25 0.749 - 0.749 - - - - predicted gene, 22767 [Source:MGI Symbol;Acc:MGI:5452544]
23. Mllt11 ENSMUSG00000053192 1776 0.748 0.748 - - - - - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
24. C030013C21Rik ENSMUSG00000085078 24 0.748 - 0.748 - - - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
25. Btbd17 ENSMUSG00000000202 565 0.747 0.747 - - - - - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
26. Stat3 ENSMUSG00000004040 1514 0.747 - 0.747 - - - - signal transducer and activator of transcription 3 [Source:MGI Symbol;Acc:MGI:103038]
27. Gm12198 ENSMUSG00000085564 18 0.746 - 0.746 - - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
28. Msh5 ENSMUSG00000007035 89 0.745 - 0.745 - - - - mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]
29. Gm8129 ENSMUSG00000059159 76 0.745 - 0.745 - - - - predicted pseudogene 8129 [Source:MGI Symbol;Acc:MGI:3646863]
30. Acta1 ENSMUSG00000031972 1386 0.745 0.745 - - - - - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
31. Fxyd1 ENSMUSG00000036570 263 0.742 - 0.742 - - - - FXYD domain-containing ion transport regulator 1 [Source:MGI Symbol;Acc:MGI:1889273]
32. Dll3 ENSMUSG00000003436 1086 0.741 0.741 - - - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
33. Elavl2 ENSMUSG00000008489 2109 0.74 0.740 - - - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
34. St14 ENSMUSG00000031995 31 0.738 - 0.738 - - - - suppression of tumorigenicity 14 (colon carcinoma) [Source:MGI Symbol;Acc:MGI:1338881]
35. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.738 0.738 - - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
36. Bace2 ENSMUSG00000040605 132 0.737 - 0.737 - - - - beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
37. Rpl35 ENSMUSG00000062997 54 0.735 - 0.735 - - - - ribosomal protein L35 [Source:MGI Symbol;Acc:MGI:1913739]
38. Gpr65 ENSMUSG00000021886 47 0.734 0.734 - - - - - G-protein coupled receptor 65 [Source:MGI Symbol;Acc:MGI:108031]
39. Pate2 ENSMUSG00000074452 74 0.733 - 0.733 - - - - prostate and testis expressed 2 [Source:MGI Symbol;Acc:MGI:2685692]
40. Zfp142 ENSMUSG00000026135 164 0.732 - 0.732 - - - - zinc finger protein 142 [Source:MGI Symbol;Acc:MGI:1924514]
41. Map2 ENSMUSG00000015222 2576 0.731 0.731 - - - - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
42. Nefl ENSMUSG00000022055 4031 0.731 0.731 - - - - - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
43. Prl2c1 ENSMUSG00000062551 9 0.73 - 0.730 - - - - Prolactin family 2, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:3649927]
44. Irs3 ENSMUSG00000047182 11 0.73 - 0.730 - - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
45. 9130230N09Rik ENSMUSG00000092626 12 0.73 - 0.730 - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
46. Gm12367 ENSMUSG00000084828 11 0.73 - 0.730 - - - - predicted gene 12367 [Source:MGI Symbol;Acc:MGI:3649554]
47. Il1r2 ENSMUSG00000026073 26 0.73 - 0.730 - - - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
48. Gm16020 ENSMUSG00000072576 11 0.73 - 0.730 - - - - predicted gene 16020 [Source:MGI Symbol;Acc:MGI:3801865]
49. Gm17108 ENSMUSG00000091133 29 0.729 - 0.729 - - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
50. Rspo1 ENSMUSG00000028871 365 0.729 - 0.729 - - - - R-spondin 1 [Source:MGI Symbol;Acc:MGI:2183426]
51. Olig2 ENSMUSG00000039830 329 0.727 0.727 - - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
52. Asl ENSMUSG00000025533 275 0.727 - 0.727 - - - - argininosuccinate lyase [Source:MGI Symbol;Acc:MGI:88084]
53. Gm16221 ENSMUSG00000082234 99 0.726 - 0.726 - - - - predicted gene 16221 [Source:MGI Symbol;Acc:MGI:3802147]
54. Pnpo ENSMUSG00000018659 322 0.726 - 0.726 - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
55. Gfod1 ENSMUSG00000051335 46 0.726 - 0.726 - - - - glucose-fructose oxidoreductase domain containing 1 [Source:MGI Symbol;Acc:MGI:2145304]
56. 1700026L06Rik 1700026L06Rik 37 0.726 - 0.726 - - - -
57. Mocs3 ENSMUSG00000074576 94 0.725 - 0.725 - - - - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]
58. Ribc1 ENSMUSG00000025257 87 0.725 - 0.725 - - - - RIB43A domain with coiled-coils 1 [Source:MGI Symbol;Acc:MGI:1913861]
59. 1810062O18Rik ENSMUSG00000084925 34 0.724 - 0.724 - - - - RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
60. Kcna6 ENSMUSG00000038077 132 0.724 - 0.724 - - - - potassium voltage-gated channel, shaker-related, subfamily, member 6 [Source:MGI Symbol;Acc:MGI:96663]
61. Mitf ENSMUSG00000035158 96 0.723 - 0.723 - - - - melanogenesis associated transcription factor [Source:MGI Symbol;Acc:MGI:104554]
62. MIMT1 MIMT1 23 0.723 - 0.723 - - - -
63. Spa17 ENSMUSG00000001948 206 0.722 - 0.722 - - - - sperm autoantigenic protein 17 [Source:MGI Symbol;Acc:MGI:1333778]
64. Cacnb2 ENSMUSG00000057914 107 0.72 - 0.720 - - - - calcium channel, voltage-dependent, beta 2 subunit [Source:MGI Symbol;Acc:MGI:894644]
65. Nefm ENSMUSG00000022054 2534 0.72 0.720 - - - - - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
66. Anks3 ENSMUSG00000022515 494 0.72 - 0.720 - - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:MGI Symbol;Acc:MGI:1919865]
67. Zrsr1 ENSMUSG00000044068 547 0.719 - 0.719 - - - - zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 [Source:MGI Symbol;Acc:MGI:98885]
68. Stap1 ENSMUSG00000029254 13 0.719 - 0.719 - - - - signal transducing adaptor family member 1 [Source:MGI Symbol;Acc:MGI:1926193]
69. Gm2026 ENSMUSG00000078886 27 0.718 - 0.718 - - - - predicted gene 2026 [Source:MGI Symbol;Acc:MGI:3780195]
70. Chmp2a ENSMUSG00000033916 1329 0.718 - 0.718 - - - - charged multivesicular body protein 2A [Source:MGI Symbol;Acc:MGI:1916203]
71. Nell2 ENSMUSG00000022454 870 0.718 0.718 - - - - - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
72. Col9a3 ENSMUSG00000027570 98 0.718 - 0.718 - - - - collagen, type IX, alpha 3 [Source:MGI Symbol;Acc:MGI:894686]
73. 6030443J06Rik ENSMUSG00000097207 38 0.717 - 0.717 - - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
74. 1700016K19Rik ENSMUSG00000053783 24 0.717 - 0.717 - - - - RIKEN cDNA 1700016K19 gene [Source:MGI Symbol;Acc:MGI:1921480]
75. Gm10736 ENSMUSG00000096842 39 0.717 - 0.717 - - - - predicted gene 10736 [Source:MGI Symbol;Acc:MGI:3704412]
76. Col9a2 ENSMUSG00000028626 672 0.717 - 0.717 - - - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
77. 5930422O12Rik ENSMUSG00000048544 74 0.715 - 0.715 - - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
78. Dkk3 ENSMUSG00000030772 426 0.715 - 0.715 - - - - dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
79. Pf4 ENSMUSG00000029373 3019 0.715 - 0.715 - - - - platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
80. Sfxn3 ENSMUSG00000025212 825 0.715 - 0.715 - - - - sideroflexin 3 [Source:MGI Symbol;Acc:MGI:2137679]
81. Isl2 ENSMUSG00000032318 488 0.713 0.713 - - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
82. Nhlh2 ENSMUSG00000048540 1310 0.712 0.712 - - - - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
83. 1700112E06Rik 52 0.712 - 0.712 - - - - RIKEN cDNA 1700112E06 gene, transcript variant X4
84. Gm15401 ENSMUSG00000072999 54 0.711 - 0.711 - - - - predicted gene 15401 [Source:MGI Symbol;Acc:MGI:3642201]
85. 1810041L15Rik 339 0.711 - 0.711 - - - - RIKEN cDNA 1810041L15 gene, transcript variant X6
86. Isl1 ENSMUSG00000042258 3553 0.711 0.711 - - - - - ISL1 transcription factor, LIM/homeodomain [Source:MGI Symbol;Acc:MGI:101791]
87. Parp6 ENSMUSG00000025237 546 0.711 0.711 - - - - - poly (ADP-ribose) polymerase family, member 6 [Source:MGI Symbol;Acc:MGI:1914537]
88. Stk32a ENSMUSG00000039954 20 0.71 0.710 - - - - - serine/threonine kinase 32A [Source:MGI Symbol;Acc:MGI:2442403]
89. Gm16907 ENSMUSG00000097242 72 0.71 - 0.710 - - - - predicted gene, 16907 [Source:MGI Symbol;Acc:MGI:4439831]
90. Edn3 ENSMUSG00000027524 420 0.709 - - 0.709 - - - endothelin 3 [Source:MGI Symbol;Acc:MGI:95285]
91. AA474331 AA474331 111 0.708 - 0.708 - - - -
92. Neurod4 ENSMUSG00000048015 764 0.707 0.707 - - - - - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
93. 2310007B03Rik ENSMUSG00000034159 31 0.706 - 0.706 - - - - RIKEN cDNA 2310007B03 gene [Source:MGI Symbol;Acc:MGI:1919124]
94. Samd15 ENSMUSG00000090812 66 0.706 - 0.706 - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
95. Tomm6 ENSMUSG00000033475 42 0.704 - 0.704 - - - - translocase of outer mitochondrial membrane 6 [Source:MGI Symbol;Acc:MGI:1913369]
96. Gpm6b ENSMUSG00000031342 715 0.703 0.703 - - - - - glycoprotein m6b [Source:MGI Symbol;Acc:MGI:107672]
97. Gm22 71 0.702 - 0.702 - - - - predicted gene 22, transcript variant X1
98. Nipal2 ENSMUSG00000038879 37 0.702 - 0.702 - - - - NIPA-like domain containing 2 [Source:MGI Symbol;Acc:MGI:1924488]
99. Zfp472 ENSMUSG00000053600 248 0.701 - 0.701 - - - - zinc finger protein 472 [Source:MGI Symbol;Acc:MGI:2385049]
100. Ak5 ENSMUSG00000039058 89 0.701 - 0.701 - - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA