Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scnm1

Gene Name Gene ID Reads Annotation
Scnm1 ENSMUSG00000092607 1513 sodium channel modifier 1 [Source:MGI Symbol;Acc:MGI:1341284]







Genes with expression patterns similar to Scnm1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scnm1 ENSMUSG00000092607 1513 6 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel modifier 1 [Source:MGI Symbol;Acc:MGI:1341284]
2. Ppp3r1 ENSMUSG00000033953 1296 1.577 - 0.875 - - 0.702 - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
3. AI597468 AI597468 3278 1.569 - 0.803 - - 0.766 -
4. Extl2 ENSMUSG00000027963 931 0.909 - 0.909 - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
5. Rmi1 ENSMUSG00000035367 647 0.896 - 0.896 - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
6. BC005624 ENSMUSG00000026851 1591 0.893 - 0.893 - - - - cDNA sequence BC005624 [Source:MGI Symbol;Acc:MGI:2385132]
7. Sfxn2 ENSMUSG00000025036 1352 0.889 - 0.889 - - - - sideroflexin 2 [Source:MGI Symbol;Acc:MGI:2137678]
8. Accs ENSMUSG00000040272 397 0.888 - 0.888 - - - - 1-aminocyclopropane-1-carboxylate synthase (non-functional) [Source:MGI Symbol;Acc:MGI:1919717]
9. Acss1 ENSMUSG00000027452 285 0.886 - 0.886 - - - - acyl-CoA synthetase short-chain family member 1 [Source:MGI Symbol;Acc:MGI:1915988]
10. Itsn2 ENSMUSG00000020640 395 0.885 - 0.885 - - - - intersectin 2 [Source:MGI Symbol;Acc:MGI:1338049]
11. Mbnl2 ENSMUSG00000022139 3296 0.884 - 0.884 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
12. 2410006H16Rik ENSMUSG00000086841 2953 0.884 - 0.884 - - - - RIKEN cDNA 2410006H16 gene [Source:MGI Symbol;Acc:MGI:1916471]
13. Gnpnat1 ENSMUSG00000037722 795 0.884 - 0.884 - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1858963]
14. Klhl18 ENSMUSG00000054792 443 0.883 - 0.883 - - - - kelch-like 18 [Source:MGI Symbol;Acc:MGI:2143315]
15. Slc27a4 ENSMUSG00000059316 1108 0.881 - 0.881 - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:1347347]
16. Gm11223 ENSMUSG00000046341 988 0.88 - 0.880 - - - - predicted gene 11223 [Source:MGI Symbol;Acc:MGI:3651631]
17. Nr2c1 ENSMUSG00000005897 852 0.88 - 0.880 - - - - nuclear receptor subfamily 2, group C, member 1 [Source:MGI Symbol;Acc:MGI:1352465]
18. Kctd9 ENSMUSG00000034327 450 0.879 - 0.879 - - - - potassium channel tetramerisation domain containing 9 [Source:MGI Symbol;Acc:MGI:2145579]
19. Gm26799 ENSMUSG00000097579 157 0.879 - 0.879 - - - - predicted gene, 26799 [Source:MGI Symbol;Acc:MGI:5477293]
20. Mocs1 ENSMUSG00000064120 232 0.878 - 0.878 - - - - molybdenum cofactor synthesis 1 [Source:MGI Symbol;Acc:MGI:1928904]
21. Polm ENSMUSG00000020474 386 0.877 - 0.877 - - - - polymerase (DNA directed), mu [Source:MGI Symbol;Acc:MGI:1860191]
22. Snx24 ENSMUSG00000024535 873 0.877 - 0.877 - - - - sorting nexing 24 [Source:MGI Symbol;Acc:MGI:1916476]
23. Crtc1 ENSMUSG00000003575 621 0.877 - 0.877 - - - - CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
24. Bfar ENSMUSG00000022684 1500 0.876 - 0.876 - - - - bifunctional apoptosis regulator [Source:MGI Symbol;Acc:MGI:1914368]
25. Cnot10 ENSMUSG00000056167 1313 0.875 - 0.875 - - - - CCR4-NOT transcription complex, subunit 10 [Source:MGI Symbol;Acc:MGI:1926143]
26. Rnf111 ENSMUSG00000032217 1237 0.875 - 0.875 - - - - ring finger 111 [Source:MGI Symbol;Acc:MGI:1934919]
27. Ddx19a ENSMUSG00000015023 3351 0.875 - 0.875 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
28. Dusp2 ENSMUSG00000027368 534 0.874 - 0.874 - - - - dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
29. Mrps6 ENSMUSG00000039680 1637 0.873 - 0.873 - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
30. Wdr33 ENSMUSG00000024400 1573 0.872 - 0.872 - - - - WD repeat domain 33 [Source:MGI Symbol;Acc:MGI:1921570]
31. St7l ENSMUSG00000045576 810 0.87 - 0.870 - - - - suppression of tumorigenicity 7-like [Source:MGI Symbol;Acc:MGI:2386964]
32. Ndufaf3 ENSMUSG00000070283 346 0.87 - 0.870 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 3 [Source:MGI Symbol;Acc:MGI:1913956]
33. Arl13b ENSMUSG00000022911 824 0.87 - 0.870 - - - - ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
34. Thumpd3 ENSMUSG00000030264 1038 0.869 - 0.869 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
35. 9230110C19Rik 238 0.869 - 0.869 - - - - RIKEN cDNA 9230110C19 gene, transcript variant X2
36. Nat10 ENSMUSG00000027185 602 0.868 - 0.868 - - - - N-acetyltransferase 10 [Source:MGI Symbol;Acc:MGI:2138939]
37. Slc7a6 ENSMUSG00000031904 1103 0.868 - 0.868 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
38. Cdk5rap1 ENSMUSG00000027487 333 0.867 - 0.867 - - - - CDK5 regulatory subunit associated protein 1 [Source:MGI Symbol;Acc:MGI:1914221]
39. Caml ENSMUSG00000021501 3056 0.867 - 0.867 - - - - calcium modulating ligand [Source:MGI Symbol;Acc:MGI:104728]
40. Mrpl23-ps1 ENSMUSG00000075279 486 0.867 - 0.867 - - - - mitichondrial ribosomal protein L23, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3650679]
41. Mettl6 ENSMUSG00000021891 1308 0.867 - 0.867 - - - - methyltransferase like 6 [Source:MGI Symbol;Acc:MGI:1914261]
42. Efna3 ENSMUSG00000028039 535 0.867 - 0.867 - - - - ephrin A3 [Source:MGI Symbol;Acc:MGI:106644]
43. Mboat7 ENSMUSG00000035596 1767 0.867 - 0.867 - - - - membrane bound O-acyltransferase domain containing 7 [Source:MGI Symbol;Acc:MGI:1924832]
44. Tradd ENSMUSG00000031887 165 0.866 - 0.866 - - - - TNFRSF1A-associated via death domain [Source:MGI Symbol;Acc:MGI:109200]
45. Kctd5 ENSMUSG00000016946 1303 0.866 - 0.866 - - - - potassium channel tetramerisation domain containing 5 [Source:MGI Symbol;Acc:MGI:1916509]
46. Slco5a1 ENSMUSG00000025938 586 0.866 - 0.866 - - - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
47. Exoc3 ENSMUSG00000034152 1428 0.865 - 0.865 - - - - exocyst complex component 3 [Source:MGI Symbol;Acc:MGI:2443972]
48. Fanca ENSMUSG00000032815 322 0.865 - 0.865 - - - - Fanconi anemia, complementation group A [Source:MGI Symbol;Acc:MGI:1341823]
49. Zfp654 ENSMUSG00000047141 509 0.865 - 0.865 - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
50. Nudt2 ENSMUSG00000028443 698 0.865 - 0.865 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:MGI Symbol;Acc:MGI:1913651]
51. B3gnt7 ENSMUSG00000079445 259 0.865 - 0.865 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384394]
52. 1110051M20Rik ENSMUSG00000040591 858 0.865 - 0.865 - - - - RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
53. Timeless ENSMUSG00000039994 1680 0.865 - 0.865 - - - - timeless circadian clock 1 [Source:MGI Symbol;Acc:MGI:1321393]
54. Pithd1 ENSMUSG00000028669 709 0.865 - 0.865 - - - - PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913443]
55. Mcph1 ENSMUSG00000039842 845 0.864 - 0.864 - - - - microcephaly, primary autosomal recessive 1 [Source:MGI Symbol;Acc:MGI:2443308]
56. Mtf1 ENSMUSG00000028890 712 0.864 - 0.864 - - - - metal response element binding transcription factor 1 [Source:MGI Symbol;Acc:MGI:101786]
57. Trpc2 ENSMUSG00000100254 1435 0.864 - 0.864 - - - - transient receptor potential cation channel, subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:109527]
58. Gabra1 ENSMUSG00000010803 177 0.864 - 0.864 - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
59. Zbtb39 ENSMUSG00000044617 771 0.864 - 0.864 - - - - zinc finger and BTB domain containing 39 [Source:MGI Symbol;Acc:MGI:2443316]
60. Cyp20a1 ENSMUSG00000049439 1294 0.863 - 0.863 - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
61. Leprot ENSMUSG00000035212 3389 0.863 - 0.863 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
62. Ttc21b ENSMUSG00000034848 584 0.863 - 0.863 - - - - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
63. Csgalnact2 ENSMUSG00000042042 405 0.863 - 0.863 - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:1926002]
64. Slc31a2 ENSMUSG00000066152 323 0.863 - 0.863 - - - - solute carrier family 31, member 2 [Source:MGI Symbol;Acc:MGI:1333844]
65. Wwp1 ENSMUSG00000041058 1490 0.862 - 0.862 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
66. Tcf7 ENSMUSG00000000782 407 0.862 - 0.862 - - - - transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
67. Gm26617 ENSMUSG00000097340 62 0.862 - 0.862 - - - - predicted gene, 26617 [Source:MGI Symbol;Acc:MGI:5477111]
68. Mrpl11 ENSMUSG00000024902 1586 0.862 - 0.862 - - - - mitochondrial ribosomal protein L11 [Source:MGI Symbol;Acc:MGI:2137215]
69. Ltf ENSMUSG00000032496 44 0.861 - 0.861 - - - - lactotransferrin [Source:MGI Symbol;Acc:MGI:96837]
70. 1110032A03Rik ENSMUSG00000037971 578 0.861 - 0.861 - - - - RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
71. Eea1 ENSMUSG00000036499 1413 0.861 - 0.861 - - - - early endosome antigen 1 [Source:MGI Symbol;Acc:MGI:2442192]
72. Rnf217 ENSMUSG00000063760 460 0.86 - 0.860 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
73. Xrcc6bp1 389 0.86 - 0.860 - - - - XRCC6 binding protein 1, transcript variant X3
74. Arhgef3 ENSMUSG00000021895 224 0.859 - 0.859 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:MGI Symbol;Acc:MGI:1918954]
75. Snhg6 ENSMUSG00000098234 549 0.859 - 0.859 - - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
76. Fam188a 930 0.859 - 0.859 - - - - family with sequence similarity 188, member A, transcript variant X3
77. Dhx16 ENSMUSG00000024422 828 0.858 - 0.858 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
78. Vangl2 ENSMUSG00000026556 2575 0.858 - 0.858 - - - - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
79. Dync1li2 ENSMUSG00000035770 2175 0.856 - 0.856 - - - - dynein, cytoplasmic 1 light intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107738]
80. Atg16l1 ENSMUSG00000026289 1129 0.856 - 0.856 - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
81. Pygb ENSMUSG00000033059 1366 0.855 - 0.855 - - - - brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
82. Mfsd7b 498 0.855 - 0.855 - - - - major facilitator superfamily domain containing 7B, transcript variant X1
83. Kcnip3 ENSMUSG00000079056 249 0.855 - 0.855 - - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
84. Erh ENSMUSG00000021131 10295 0.854 - 0.854 - - - - ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
85. Mlh3 ENSMUSG00000021245 389 0.853 - 0.853 - - - - mutL homolog 3 [Source:MGI Symbol;Acc:MGI:1353455]
86. Asb6 ENSMUSG00000039483 591 0.852 - 0.852 - - - - ankyrin repeat and SOCS box-containing 6 [Source:MGI Symbol;Acc:MGI:1919573]
87. Phpt1 ENSMUSG00000036504 2457 0.852 - 0.852 - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
88. Med21 ENSMUSG00000030291 1555 0.852 - 0.852 - - - - mediator complex subunit 21 [Source:MGI Symbol;Acc:MGI:1347064]
89. Ptpn14 ENSMUSG00000026604 1266 0.852 - 0.852 - - - - protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
90. Lrig2 ENSMUSG00000032913 869 0.851 - 0.851 - - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:MGI Symbol;Acc:MGI:2443718]
91. Slc29a4 ENSMUSG00000050822 399 0.851 - 0.851 - - - - solute carrier family 29 (nucleoside transporters), member 4 [Source:MGI Symbol;Acc:MGI:2385330]
92. Dach2 ENSMUSG00000025592 622 0.851 - 0.851 - - - - dachshund family transcription factor 2 [Source:MGI Symbol;Acc:MGI:1890446]
93. Fam118b ENSMUSG00000050471 1916 0.851 - 0.851 - - - - family with sequence similarity 118, member B [Source:MGI Symbol;Acc:MGI:1924483]
94. Gm17167 ENSMUSG00000091542 371 0.851 - 0.851 - - - - predicted gene 17167 [Source:MGI Symbol;Acc:MGI:4937994]
95. Hist1h3a ENSMUSG00000069265 213 0.85 - 0.850 - - - - histone cluster 1, H3a [Source:MGI Symbol;Acc:MGI:2668828]
96. Fam219b ENSMUSG00000032305 534 0.85 - 0.850 - - - - family with sequence similarity 219, member B [Source:MGI Symbol;Acc:MGI:1925573]
97. Fbxl16 ENSMUSG00000025738 443 0.85 - 0.850 - - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
98. Cdc25c ENSMUSG00000044201 1273 0.849 - 0.849 - - - - cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
99. Ccdc137 ENSMUSG00000049957 859 0.849 - 0.849 - - - - coiled-coil domain containing 137 [Source:MGI Symbol;Acc:MGI:1914541]
100. Pacs1 ENSMUSG00000024855 1048 0.847 - 0.847 - - - - phosphofurin acidic cluster sorting protein 1 [Source:MGI Symbol;Acc:MGI:1277113]

There are 406 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA