Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scn9a

Gene Name Gene ID Reads Annotation
Scn9a ENSMUSG00000075316 42 sodium channel, voltage-gated, type IX, alpha [Source:MGI Symbol;Acc:MGI:107636]







Genes with expression patterns similar to Scn9a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn9a ENSMUSG00000075316 42 6 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type IX, alpha [Source:MGI Symbol;Acc:MGI:107636]
2. A930001C03Rik ENSMUSG00000087132 15 1.706 0.808 0.898 - - - - RIKEN cDNA A930001C03 gene [Source:MGI Symbol;Acc:MGI:2441838]
3. Hp ENSMUSG00000031722 17 1 - 1.000 - - - - haptoglobin [Source:MGI Symbol;Acc:MGI:96211]
4. A730046J19Rik ENSMUSG00000085139 47 0.915 - - 0.915 - - - RIKEN cDNA A730046J19 gene [Source:MGI Symbol;Acc:MGI:2442684]
5. Kcnk4 ENSMUSG00000024957 2 0.898 - 0.898 - - - - potassium channel, subfamily K, member 4 [Source:MGI Symbol;Acc:MGI:1298234]
6. Gm13052 ENSMUSG00000085816, ENSMUSG00000116447 1 0.898 - 0.898 - - - - predicted gene 13052 [Source:MGI Symbol;Acc:MGI:3651990]
7. Vmn2r18 ENSMUSG00000091794 10 0.898 - 0.898 - - - - vomeronasal 2, receptor 18 [Source:MGI Symbol;Acc:MGI:3645314]
8. Pde7b ENSMUSG00000019990 24 0.898 - 0.898 - - - - phosphodiesterase 7B [Source:MGI Symbol;Acc:MGI:1352752]
9. Gm5946 ENSMUSG00000048592 6 0.898 - 0.898 - - - - predicted gene 5946 [Source:MGI Symbol;Acc:MGI:3644989]
10. Cd200r1 ENSMUSG00000022667 10 0.898 - 0.898 - - - - CD200 receptor 1 [Source:MGI Symbol;Acc:MGI:1889024]
11. Evi2a ENSMUSG00000078771 27 0.898 - 0.898 - - - - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
12. Gm11652 ENSMUSG00000083465 13 0.898 - 0.898 - - - - predicted gene 11652 [Source:MGI Symbol;Acc:MGI:3651204]
13. 4933434M16Rik ENSMUSG00000020624 1 0.898 - 0.898 - - - - RIKEN cDNA 4933434M16 gene [Source:MGI Symbol;Acc:MGI:1918453]
14. 1700039M10Rik ENSMUSG00000097933 3 0.898 - 0.898 - - - - RIKEN cDNA 1700039M10 gene [Source:MGI Symbol;Acc:MGI:1914768]
15. Vmn1r38 ENSMUSG00000115170 1 0.898 - 0.898 - - - - vomeronasal 1 receptor 38 [Source:MGI Symbol;Acc:MGI:2159445]
16. Nyap1 ENSMUSG00000045348 31 0.898 - 0.898 - - - - neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 [Source:MGI Symbol;Acc:MGI:2443880]
17. Optc ENSMUSG00000010311 8 0.898 - 0.898 - - - - opticin [Source:MGI Symbol;Acc:MGI:2151113]
18. Gm15131 ENSMUSG00000082961 2 0.898 - 0.898 - - - - predicted gene 15131 [Source:MGI Symbol;Acc:MGI:3642416]
19. Rlbp1 ENSMUSG00000039194 10 0.898 - 0.898 - - - - retinaldehyde binding protein 1 [Source:MGI Symbol;Acc:MGI:97930]
20. Gm10371 ENSMUSG00000072589 2 0.898 - 0.898 - - - - predicted gene 10371 [Source:MGI Symbol;Acc:MGI:3642716]
21. Cyp17a1 ENSMUSG00000003555 8 0.898 - 0.898 - - - - cytochrome P450, family 17, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88586]
22. Dnah5 ENSMUSG00000022262 9 0.898 - 0.898 - - - - dynein, axonemal, heavy chain 5 [Source:MGI Symbol;Acc:MGI:107718]
23. Cd86 ENSMUSG00000022901 8 0.898 - 0.898 - - - - CD86 antigen [Source:MGI Symbol;Acc:MGI:101773]
24. Gm25534 ENSMUSG00000093106 1 0.898 - 0.898 - - - - predicted gene, 25534 [Source:MGI Symbol;Acc:MGI:5455311]
25. Nxnl1 ENSMUSG00000034829 6 0.898 - 0.898 - - - - nucleoredoxin-like 1 [Source:MGI Symbol;Acc:MGI:1924446]
26. Itih2 ENSMUSG00000037254 468 0.898 - 0.898 - - - - inter-alpha trypsin inhibitor, heavy chain 2 [Source:MGI Symbol;Acc:MGI:96619]
27. Gm14245 ENSMUSG00000084006 1 0.898 - 0.898 - - - - predicted gene 14245 [Source:MGI Symbol;Acc:MGI:3651254]
28. Ttc18 Ttc18 7 0.898 - 0.898 - - - -
29. Gm11571 ENSMUSG00000087581 2 0.898 - 0.898 - - - - predicted gene 11571 [Source:MGI Symbol;Acc:MGI:3650087]
30. C87414 ENSMUSG00000070686 1 0.898 - 0.898 - - - - expressed sequence C87414 [Source:MGI Symbol;Acc:MGI:2141341]
31. Gm3608 ENSMUSG00000067017 3 0.897 0.897 - - - - - predicted gene 3608 [Source:MGI Symbol;Acc:MGI:3804932]
32. Adamts6 ENSMUSG00000046169 49 0.889 0.889 - - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 [Source:MGI Symbol;Acc:MGI:1347348]
33. D030018L15Rik ENSMUSG00000078925 11 0.879 - - 0.879 - - - RIKEN cDNA D030018L15 gene [Source:MGI Symbol;Acc:MGI:3028082]
34. Ocel1 ENSMUSG00000002396 24 0.878 0.878 - - - - - occludin/ELL domain containing 1 [Source:MGI Symbol;Acc:MGI:1924340]
35. Itgae ENSMUSG00000005947 13 0.875 - - 0.875 - - - integrin alpha E, epithelial-associated [Source:MGI Symbol;Acc:MGI:1298377]
36. Eml6 ENSMUSG00000044072 4 0.875 - - 0.875 - - - echinoderm microtubule associated protein like 6 [Source:MGI Symbol;Acc:MGI:2442895]
37. Tmem169 ENSMUSG00000026188 68 0.872 - - 0.872 - - - transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
38. Gm9752 ENSMUSG00000025450 0 0.869 - - 0.869 - - - predicted gene 9752 [Source:MGI Symbol;Acc:MGI:3641896]
39. Zfp36l3 ENSMUSG00000059334 2 0.869 - - 0.869 - - - zinc finger protein 36, C3H type-like 3 [Source:MGI Symbol;Acc:MGI:3525151]
40. Gm10737 Gm10737 2 0.869 - - 0.869 - - -
41. Grm6 ENSMUSG00000000617 1 0.869 - - 0.869 - - - glutamate receptor, metabotropic 6 [Source:MGI Symbol;Acc:MGI:1351343]
42. Gm12405 ENSMUSG00000087054 1 0.869 - - 0.869 - - - predicted gene 12405 [Source:MGI Symbol;Acc:MGI:3649392]
43. Aurkc ENSMUSG00000070837 4 0.869 - - 0.869 - - - aurora kinase C [Source:MGI Symbol;Acc:MGI:1321119]
44. Meig1 ENSMUSG00000026650 7 0.869 - - 0.869 - - - meiosis expressed gene 1 [Source:MGI Symbol;Acc:MGI:1202878]
45. Wfdc17 ENSMUSG00000069792 12 0.869 - - 0.869 - - - WAP four-disulfide core domain 17 [Source:MGI Symbol;Acc:MGI:3649773]
46. 2810471M01Rik ENSMUSG00000084966 1 0.869 - - 0.869 - - - RIKEN cDNA 2810471M01 gene [Source:MGI Symbol;Acc:MGI:1920068]
47. Gm5430 ENSMUSG00000098180 21 0.869 - - 0.869 - - - predicted gene 5430 [Source:MGI Symbol;Acc:MGI:3648216]
48. Gm24667 ENSMUSG00000089563 0 0.869 - - 0.869 - - - predicted gene, 24667 [Source:MGI Symbol;Acc:MGI:5454444]
49. Gm23502 ENSMUSG00000065836 1 0.869 - - 0.869 - - - predicted gene, 23502 [Source:MGI Symbol;Acc:MGI:5453279]
50. Gm11476 ENSMUSG00000085596 1 0.869 - - 0.869 - - - predicted gene 11476 [Source:MGI Symbol;Acc:MGI:3705135]
51. R3hdml ENSMUSG00000078949 4 0.869 - - 0.869 - - - R3H domain containing-like [Source:MGI Symbol;Acc:MGI:3650937]
52. Gm15524 ENSMUSG00000089894 0 0.869 - - 0.869 - - - predicted gene 15524 [Source:MGI Symbol;Acc:MGI:3782971]
53. Gm9979 ENSMUSG00000055732 1 0.869 - - 0.869 - - - predicted gene 9979 [Source:MGI Symbol;Acc:MGI:3642885]
54. Gm14697 ENSMUSG00000086948 2 0.869 - - 0.869 - - - predicted gene 14697 [Source:MGI Symbol;Acc:MGI:3705281]
55. Hrh3 ENSMUSG00000039059 5 0.869 - - 0.869 - - - histamine receptor H3 [Source:MGI Symbol;Acc:MGI:2139279]
56. Gm22866 ENSMUSG00000065881 1 0.869 - - 0.869 - - - predicted gene, 22866 [Source:MGI Symbol;Acc:MGI:5452643]
57. Syt17 ENSMUSG00000058420 1 0.869 - - 0.869 - - - synaptotagmin XVII [Source:MGI Symbol;Acc:MGI:104966]
58. Gm5384 ENSMUSG00000080998 2 0.869 - - 0.869 - - - predicted gene 5384 [Source:MGI Symbol;Acc:MGI:3646660]
59. Gm7191 ENSMUSG00000098116 1 0.869 - - 0.869 - - - predicted gene 7191 [Source:MGI Symbol;Acc:MGI:3779693]
60. Gm12253 ENSMUSG00000058287 6 0.869 - - 0.869 - - - predicted gene 12253 [Source:MGI Symbol;Acc:MGI:3651568]
61. Gm14473 ENSMUSG00000081680 3 0.869 - - 0.869 - - - predicted gene 14473 [Source:MGI Symbol;Acc:MGI:3650130]
62. Zfp59 ENSMUSG00000078779 6 0.869 - - 0.869 - - - zinc finger protein 59 [Source:MGI Symbol;Acc:MGI:99206]
63. Il4i1 ENSMUSG00000074141 2 0.869 - - 0.869 - - - interleukin 4 induced 1 [Source:MGI Symbol;Acc:MGI:109552]
64. Dlx1os Dlx1os 2 0.869 - - 0.869 - - -
65. Dnmbp ENSMUSG00000025195 3 0.869 - - 0.869 - - - dynamin binding protein [Source:MGI Symbol;Acc:MGI:1917352]
66. Guca2a ENSMUSG00000023247 0 0.869 - - 0.869 - - - guanylate cyclase activator 2a (guanylin) [Source:MGI Symbol;Acc:MGI:102738]
67. Mybpc3 ENSMUSG00000002100 2 0.869 - - 0.869 - - - myosin binding protein C, cardiac [Source:MGI Symbol;Acc:MGI:102844]
68. Gm14514 ENSMUSG00000081858 0 0.869 - - 0.869 - - - predicted gene 14514 [Source:MGI Symbol;Acc:MGI:3705639]
69. Gm17122 ENSMUSG00000090458 0 0.869 - - 0.869 - - - predicted gene 17122 [Source:MGI Symbol;Acc:MGI:4937949]
70. Mob3a ENSMUSG00000003348 3 0.868 - - 0.868 - - - MOB kinase activator 3A [Source:MGI Symbol;Acc:MGI:3050117]
71. Cacna2d3 ENSMUSG00000021991 30 0.847 - - - 0.847 - - calcium channel, voltage-dependent, alpha2/delta subunit 3 [Source:MGI Symbol;Acc:MGI:1338890]
72. Ankrd1 ENSMUSG00000024803 49 0.845 0.845 - - - - - ankyrin repeat domain 1 (cardiac muscle) [Source:MGI Symbol;Acc:MGI:1097717]
73. Slc45a1 ENSMUSG00000039838 52 0.833 - - 0.833 - - - solute carrier family 45, member 1 [Source:MGI Symbol;Acc:MGI:2653235]
74. Gm3512 ENSMUSG00000090363 23 0.828 - - 0.828 - - - predicted gene 3512 [Source:MGI Symbol;Acc:MGI:3781689]
75. Golga7b ENSMUSG00000042532 16 0.824 - - 0.824 - - - golgi autoantigen, golgin subfamily a, 7B [Source:MGI Symbol;Acc:MGI:1918396]
76. Evx1 ENSMUSG00000005503 33 0.82 - - - 0.820 - - even-skipped homeobox 1 [Source:MGI Symbol;Acc:MGI:95461]
77. Celf6 ENSMUSG00000032297 13 0.818 - - 0.818 - - - CUGBP, Elav-like family member 6 [Source:MGI Symbol;Acc:MGI:1923433]
78. Kcne1 ENSMUSG00000039639 6 0.815 - 0.815 - - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
79. B3galt4 ENSMUSG00000067370 28 0.81 - - 0.810 - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1859517]
80. Nme7 ENSMUSG00000026575 5 0.808 0.808 - - - - - NME/NM23 family member 7 [Source:MGI Symbol;Acc:MGI:2449121]
81. Gm21893 ENSMUSG00000095262 1 0.808 0.808 - - - - - predicted gene, 21893 [Source:MGI Symbol;Acc:MGI:5434057]
82. Gm8526 ENSMUSG00000057685 6 0.808 0.808 - - - - - predicted gene 8526 [Source:MGI Symbol;Acc:MGI:3645225]
83. Bst2 ENSMUSG00000046718 27 0.808 0.808 - - - - - bone marrow stromal cell antigen 2 [Source:MGI Symbol;Acc:MGI:1916800]
84. Gm13068 ENSMUSG00000085403 2 0.808 0.808 - - - - - predicted gene 13068 [Source:MGI Symbol;Acc:MGI:3651967]
85. Gm13259 ENSMUSG00000083241 1 0.808 0.808 - - - - - predicted gene 13259 [Source:MGI Symbol;Acc:MGI:3700962]
86. Gm26912 ENSMUSG00000097832 3 0.808 0.808 - - - - - predicted gene, 26912 [Source:MGI Symbol;Acc:MGI:5477406]
87. H2-Aa ENSMUSG00000036594 3 0.808 0.808 - - - - - histocompatibility 2, class II antigen A, alpha [Source:MGI Symbol;Acc:MGI:95895]
88. Chi3l7 Chi3l7 3 0.808 0.808 - - - - -
89. Pcdhb2 ENSMUSG00000051599 7 0.808 0.808 - - - - - protocadherin beta 2 [Source:MGI Symbol;Acc:MGI:2136735]
90. Gm12370 ENSMUSG00000084352 2 0.808 0.808 - - - - - predicted gene 12370 [Source:MGI Symbol;Acc:MGI:3652094]
91. Gm20459 Gm20459 1 0.808 0.808 - - - - -
92. 4930412F09Rik ENSMUSG00000085321 6 0.808 0.808 - - - - - RIKEN cDNA 4930412F09 gene [Source:MGI Symbol;Acc:MGI:1921177]
93. Ucn2 ENSMUSG00000049699 2 0.808 0.808 - - - - - urocortin 2 [Source:MGI Symbol;Acc:MGI:2176375]
94. Gm5116 ENSMUSG00000100751 16 0.808 0.808 - - - - - predicted gene 5116 [Source:MGI Symbol;Acc:MGI:3649164]
95. Gm22338 ENSMUSG00000088340 3 0.808 0.808 - - - - - predicted gene, 22338 [Source:MGI Symbol;Acc:MGI:5452115]
96. Slfn5 ENSMUSG00000054404 3 0.808 0.808 - - - - - schlafen 5 [Source:MGI Symbol;Acc:MGI:1329004]
97. 9230019H11Rik ENSMUSG00000071434 1 0.808 0.808 - - - - - RIKEN cDNA 9230019H11 gene [Source:MGI Symbol;Acc:MGI:3588256]
98. n-R5s31 ENSMUSG00000077350 17 0.808 0.808 - - - - - nuclear encoded rRNA 5S 31 [Source:MGI Symbol;Acc:MGI:4421876]
99. Gm14673 ENSMUSG00000081514 4 0.808 0.808 - - - - - predicted gene 14673 [Source:MGI Symbol;Acc:MGI:3705555]
100. Gm2974 ENSMUSG00000079391 9 0.808 0.808 - - - - - predicted gene 2974 [Source:MGI Symbol;Acc:MGI:3781152]

There are 88 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA