Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn3b

Gene Name Gene ID Reads Annotation
Scn3b ENSMUSG00000049281 88 sodium channel, voltage-gated, type III, beta [Source:MGI Symbol;Acc:MGI:1918882]







Genes with expression patterns similar to Scn3b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn3b ENSMUSG00000049281 88 6 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type III, beta [Source:MGI Symbol;Acc:MGI:1918882]
2. Slc6a1 ENSMUSG00000030310 22 1.611 - 0.840 - 0.771 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
3. Nkx2-9 ENSMUSG00000058669 17 1.596 - 0.822 0.774 - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
4. Rasgef1c ENSMUSG00000020374 48 1.483 - - 0.752 - 0.731 - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
5. Olig2 ENSMUSG00000039830 329 1.472 - - 0.765 - - 0.707 oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
6. Disp2 ENSMUSG00000040035 230 1.451 - - 0.702 - - 0.749 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
7. Mapt ENSMUSG00000018411 1834 1.446 - - - 0.739 - 0.707 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
8. Gm8822 ENSMUSG00000082319 15 1.433 - 0.732 0.701 - - - predicted gene 8822 [Source:MGI Symbol;Acc:MGI:3648640]
9. Cd4 ENSMUSG00000023274 46 0.941 - - 0.941 - - - CD4 antigen [Source:MGI Symbol;Acc:MGI:88335]
10. 1700041G16Rik ENSMUSG00000054822 3 0.938 - - 0.938 - - - RIKEN cDNA 1700041G16 gene [Source:MGI Symbol;Acc:MGI:1920549]
11. D030046N08Rik ENSMUSG00000089760 2 0.938 - - 0.938 - - - RIKEN cDNA D030046N08 gene [Source:MGI Symbol;Acc:MGI:3645234]
12. 1700007P06Rik ENSMUSG00000089730 1 0.938 - - 0.938 - - - RIKEN cDNA 1700007P06 gene [Source:MGI Symbol;Acc:MGI:1916558]
13. Vsig8 ENSMUSG00000049598 1 0.938 - - 0.938 - - - V-set and immunoglobulin domain containing 8 [Source:MGI Symbol;Acc:MGI:3642995]
14. Gm13182 ENSMUSG00000082580 7 0.938 - - 0.938 - - - predicted gene 13182 [Source:MGI Symbol;Acc:MGI:3650465]
15. 4930423O20Rik 4930423O20Rik 6 0.938 - - 0.938 - - -
16. Gm11762 ENSMUSG00000087675 1 0.938 - - 0.938 - - - predicted gene 11762 [Source:MGI Symbol;Acc:MGI:3651277]
17. Gm18709 ENSMUSG00000097895 2 0.938 - - 0.938 - - - predicted gene, 18709 [Source:MGI Symbol;Acc:MGI:5010894]
18. Prss56 ENSMUSG00000036480 4 0.938 - - 0.938 - - - protease, serine 56 [Source:MGI Symbol;Acc:MGI:1916703]
19. Mgl2 ENSMUSG00000040950 9 0.938 - - 0.938 - - - macrophage galactose N-acetyl-galactosamine specific lectin 2 [Source:MGI Symbol;Acc:MGI:2385729]
20. Xirp2 ENSMUSG00000027022 2 0.938 - - 0.938 - - - xin actin-binding repeat containing 2 [Source:MGI Symbol;Acc:MGI:2685198]
21. Agr3 ENSMUSG00000036231 2 0.938 - - 0.938 - - - anterior gradient 3 [Source:MGI Symbol;Acc:MGI:2685734]
22. A630031M04Rik ENSMUSG00000087470 3 0.938 - - 0.938 - - - RIKEN cDNA A630031M04 gene [Source:MGI Symbol;Acc:MGI:2444470]
23. D630032N06Rik D630032N06Rik 10 0.938 - - 0.938 - - -
24. Gm4793 ENSMUSG00000054412 1 0.938 - - 0.938 - - - predicted gene 4793 [Source:MGI Symbol;Acc:MGI:3646955]
25. 4933433G15Rik ENSMUSG00000097021 1 0.938 - - 0.938 - - - RIKEN cDNA 4933433G15 gene [Source:MGI Symbol;Acc:MGI:1918524]
26. Omg ENSMUSG00000049612 4 0.938 - - 0.938 - - - oligodendrocyte myelin glycoprotein [Source:MGI Symbol;Acc:MGI:106586]
27. Dnah17 ENSMUSG00000033987 5 0.938 - - 0.938 - - - dynein, axonemal, heavy chain 17 [Source:MGI Symbol;Acc:MGI:1917176]
28. Gm13393 ENSMUSG00000086519 1 0.938 - - 0.938 - - - predicted gene 13393 [Source:MGI Symbol;Acc:MGI:3649783]
29. Aspdh ENSMUSG00000038704 3 0.938 - - 0.938 - - - aspartate dehydrogenase domain containing [Source:MGI Symbol;Acc:MGI:1915602]
30. Capn8 ENSMUSG00000038599 1 0.938 - - 0.938 - - - calpain 8 [Source:MGI Symbol;Acc:MGI:2181366]
31. Gm26522 ENSMUSG00000097423 10 0.938 - - 0.938 - - - predicted gene, 26522 [Source:MGI Symbol;Acc:MGI:5477016]
32. Btn1a1 ENSMUSG00000000706 24 0.938 - - 0.938 - - - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
33. Gm11932 Gm11932 3 0.938 - - 0.938 - - -
34. 4930430J20Rik 4930430J20Rik 1 0.938 - - 0.938 - - -
35. Cnga3 ENSMUSG00000026114 7 0.938 - - 0.938 - - - cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
36. Gm26744 ENSMUSG00000097401 4 0.938 - - 0.938 - - - predicted gene, 26744 [Source:MGI Symbol;Acc:MGI:5477238]
37. Mobp ENSMUSG00000032517 11 0.936 - - 0.936 - - - myelin-associated oligodendrocytic basic protein [Source:MGI Symbol;Acc:MGI:108511]
38. Piwil1 ENSMUSG00000029423 4 0.934 - - 0.934 - - - piwi-like RNA-mediated gene silencing 1 [Source:MGI Symbol;Acc:MGI:1928897]
39. Vmn1r15 ENSMUSG00000115199 9 0.916 - - 0.916 - - - vomeronasal 1 receptor 15 [Source:MGI Symbol;Acc:MGI:2148527]
40. Cwh43 ENSMUSG00000029154 6 0.916 - - 0.916 - - - cell wall biogenesis 43 C-terminal homolog [Source:MGI Symbol;Acc:MGI:2444131]
41. Rasgef1a ENSMUSG00000030134 2 0.916 - - 0.916 - - - RasGEF domain family, member 1A [Source:MGI Symbol;Acc:MGI:1917977]
42. Lrrc38 ENSMUSG00000028584, ENSMUSG00000097351 7 0.916 - - 0.916 - - - leucine rich repeat containing 38 [Source:MGI Symbol;Acc:MGI:2442845]
43. D5Ertd577e ENSMUSG00000070677 7 0.916 - - 0.916 - - - DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
44. Ttc16 ENSMUSG00000039021 4 0.916 - - 0.916 - - - tetratricopeptide repeat domain 16 [Source:MGI Symbol;Acc:MGI:2443048]
45. Hmgb1-ps8 ENSMUSG00000097295 12 0.902 - - 0.902 - - - high mobility group box 1, pseudogene 8 [Source:MGI Symbol;Acc:MGI:96114]
46. Musk ENSMUSG00000057280 3 0.901 - - 0.901 - - - muscle, skeletal, receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:103581]
47. Elfn1 ENSMUSG00000048988 34 0.901 - - 0.901 - - - leucine rich repeat and fibronectin type III, extracellular 1 [Source:MGI Symbol;Acc:MGI:2442479]
48. Zmynd10 ENSMUSG00000010044 3 0.886 - - 0.886 - - - zinc finger, MYND domain containing 10 [Source:MGI Symbol;Acc:MGI:2387863]
49. Gm15559 ENSMUSG00000086401 9 0.875 - - 0.875 - - - predicted gene 15559 [Source:MGI Symbol;Acc:MGI:3783008]
50. Gm20731 ENSMUSG00000102912 41 0.874 - - 0.874 - - - predicted gene, 20731 [Source:MGI Symbol;Acc:MGI:5313040]
51. Ptpro ENSMUSG00000030223 65 0.872 - - 0.872 - - - protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
52. Gm17244 ENSMUSG00000102997 14 0.869 - - 0.869 - - - predicted gene, 17244 [Source:MGI Symbol;Acc:MGI:4936878]
53. Saa3 ENSMUSG00000040026 9 0.869 - - 0.869 - - - serum amyloid A 3 [Source:MGI Symbol;Acc:MGI:98223]
54. Hrk ENSMUSG00000046607 35 0.869 - - 0.869 - - - harakiri, BCL2 interacting protein (contains only BH3 domain) [Source:MGI Symbol;Acc:MGI:1201608]
55. Olig1 ENSMUSG00000046160 18 0.867 - - 0.867 - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
56. Gm17084 ENSMUSG00000091462 24 0.865 - - 0.865 - - - predicted gene 17084 [Source:MGI Symbol;Acc:MGI:4937911]
57. AW047730 ENSMUSG00000097428 42 0.863 - - 0.863 - - - expressed sequence AW047730 [Source:MGI Symbol;Acc:MGI:2139951]
58. RP23-296I6.9 RP23-296I6.9 3 0.863 - - 0.863 - - -
59. Capns2 ENSMUSG00000078144 1 0.856 - - 0.856 - - - calpain, small subunit 2 [Source:MGI Symbol;Acc:MGI:1916793]
60. Nkpd1 ENSMUSG00000060621 2 0.856 - - 0.856 - - - NTPase, KAP family P-loop domain containing 1 [Source:MGI Symbol;Acc:MGI:1916797]
61. Adcyap1 ENSMUSG00000024256 107 0.856 - - 0.856 - - - adenylate cyclase activating polypeptide 1 [Source:MGI Symbol;Acc:MGI:105094]
62. Ccdc24 ENSMUSG00000078588 8 0.856 - - 0.856 - - - coiled-coil domain containing 24 [Source:MGI Symbol;Acc:MGI:2685874]
63. A430105I19Rik 8 0.856 - - 0.856 - - - RIKEN cDNA A430105I19 gene, transcript variant X2
64. Wdr72 ENSMUSG00000044976 12 0.854 - - 0.854 - - - WD repeat domain 72 [Source:MGI Symbol;Acc:MGI:3583957]
65. Gm24545 ENSMUSG00000089276 38 0.853 - - 0.853 - - - predicted gene, 24545 [Source:MGI Symbol;Acc:MGI:5454322]
66. Ggn ENSMUSG00000031493 13 0.85 - - 0.850 - - - gametogenetin [Source:MGI Symbol;Acc:MGI:2181461]
67. Gm12488 ENSMUSG00000082000 3 0.845 0.845 - - - - - predicted gene 12488 [Source:MGI Symbol;Acc:MGI:3650947]
68. Wibg Wibg 2 0.845 0.845 - - - - -
69. Gm20512 ENSMUSG00000092381 1 0.845 0.845 - - - - - predicted gene 20512 [Source:MGI Symbol;Acc:MGI:5141977]
70. Krt13 ENSMUSG00000044041 8 0.845 0.845 - - - - - keratin 13 [Source:MGI Symbol;Acc:MGI:101925]
71. Arhgap22 ENSMUSG00000063506 2 0.845 0.845 - - - - - Rho GTPase activating protein 22 [Source:MGI Symbol;Acc:MGI:2443418]
72. 9530080O11Rik ENSMUSG00000044125 2 0.845 0.845 - - - - - RIKEN cDNA 9530080O11 gene [Source:MGI Symbol;Acc:MGI:2441751]
73. Nrap ENSMUSG00000049134 1 0.845 0.845 - - - - - nebulin-related anchoring protein [Source:MGI Symbol;Acc:MGI:1098765]
74. Gm22435 ENSMUSG00000089177 2 0.845 0.845 - - - - - predicted gene, 22435 [Source:MGI Symbol;Acc:MGI:5452212]
75. R3hdml ENSMUSG00000078949 4 0.845 0.845 - - - - - R3H domain containing-like [Source:MGI Symbol;Acc:MGI:3650937]
76. Gm23783 ENSMUSG00000088566 1 0.845 0.845 - - - - - predicted gene, 23783 [Source:MGI Symbol;Acc:MGI:5453560]
77. Gm12631 ENSMUSG00000084809 2 0.845 0.845 - - - - - predicted gene 12631 [Source:MGI Symbol;Acc:MGI:3650969]
78. 2610316D01Rik ENSMUSG00000097040 36 0.845 0.845 - - - - - RIKEN cDNA 2610316D01 gene [Source:MGI Symbol;Acc:MGI:1919761]
79. Gm17511 ENSMUSG00000090460 2 0.845 0.845 - - - - - predicted gene, 17511 [Source:MGI Symbol;Acc:MGI:4937145]
80. Hist2h3c2 ENSMUSG00000081058 12 0.845 0.845 - - - - - histone cluster 2, H3c2 [Source:MGI Symbol;Acc:MGI:2448357]
81. D230022J07Rik ENSMUSG00000087176 5 0.845 0.845 - - - - - RIKEN cDNA D230022J07 gene [Source:MGI Symbol;Acc:MGI:2444095]
82. Nphs2 ENSMUSG00000026602 1 0.845 0.845 - - - - - nephrosis 2, podocin [Source:MGI Symbol;Acc:MGI:2157018]
83. Gm26531 ENSMUSG00000097902 9 0.845 0.845 - - - - - predicted gene, 26531 [Source:MGI Symbol;Acc:MGI:5477025]
84. Ms4a4d ENSMUSG00000024678 17 0.845 0.845 - - - - - membrane-spanning 4-domains, subfamily A, member 4D [Source:MGI Symbol;Acc:MGI:1913857]
85. Ces2g ENSMUSG00000031877 1 0.845 0.845 - - - - - carboxylesterase 2G [Source:MGI Symbol;Acc:MGI:1919611]
86. Prss34 ENSMUSG00000056399 33 0.845 0.845 - - - - - protease, serine 34 [Source:MGI Symbol;Acc:MGI:2681414]
87. Plin5 ENSMUSG00000011305 3 0.845 0.845 - - - - - perilipin 5 [Source:MGI Symbol;Acc:MGI:1914218]
88. Spef2 ENSMUSG00000072663 6 0.845 0.845 - - - - - sperm flagellar 2 [Source:MGI Symbol;Acc:MGI:2443727]
89. Gm15302 ENSMUSG00000084377 8 0.845 0.845 - - - - - predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
90. Nxpe5 ENSMUSG00000047592 11 0.845 0.845 - - - - - neurexophilin and PC-esterase domain family, member 5 [Source:MGI Symbol;Acc:MGI:3584036]
91. Dlx1os Dlx1os 2 0.845 0.845 - - - - -
92. Gm10774 ENSMUSG00000074846 3 0.845 0.845 - - - - - predicted pseudogene 10774 [Source:MGI Symbol;Acc:MGI:3642325]
93. Smim5 ENSMUSG00000048442 4 0.845 0.845 - - - - - small integral membrane protein 5 [Source:MGI Symbol;Acc:MGI:1913778]
94. 4732447D17Rik 4732447D17Rik 2 0.845 0.845 - - - - -
95. Gm26888 ENSMUSG00000097294 1 0.845 0.845 - - - - - predicted gene, 26888 [Source:MGI Symbol;Acc:MGI:5477382]
96. Ccl3 ENSMUSG00000000982 12 0.845 0.845 - - - - - chemokine (C-C motif) ligand 3 [Source:MGI Symbol;Acc:MGI:98260]
97. Gm4952 ENSMUSG00000071633 4 0.845 0.845 - - - - - predicted gene 4952 [Source:MGI Symbol;Acc:MGI:3643569]
98. Gm4673 ENSMUSG00000097750 26 0.845 0.845 - - - - - predicted gene 4673 [Source:MGI Symbol;Acc:MGI:3782854]
99. Olfr710 ENSMUSG00000045581 1 0.845 0.845 - - - - - olfactory receptor 710 [Source:MGI Symbol;Acc:MGI:3030544]
100. Gm25193 ENSMUSG00000093409 1 0.845 0.845 - - - - - predicted gene, 25193 [Source:MGI Symbol;Acc:MGI:5454970]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA