Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn1b

Gene Name Gene ID Reads Annotation
Scn1b ENSMUSG00000019194 28 sodium channel, voltage-gated, type I, beta [Source:MGI Symbol;Acc:MGI:98247]







Genes with expression patterns similar to Scn1b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn1b ENSMUSG00000019194 28 6 1.000 1.000 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type I, beta [Source:MGI Symbol;Acc:MGI:98247]
2. Gm9359 ENSMUSG00000091040 3 0.886 0.886 - - - - - predicted gene 9359 [Source:MGI Symbol;Acc:MGI:3648512]
3. Klhdc8a ENSMUSG00000042115 20 0.876 - 0.876 - - - - kelch domain containing 8A [Source:MGI Symbol;Acc:MGI:2442630]
4. Dgkq ENSMUSG00000004815 18 0.853 - 0.853 - - - - diacylglycerol kinase, theta [Source:MGI Symbol;Acc:MGI:102918]
5. Hpcal4 ENSMUSG00000046093 25 0.843 - 0.843 - - - - hippocalcin-like 4 [Source:MGI Symbol;Acc:MGI:2157521]
6. Gm12874 ENSMUSG00000084196 2 0.836 - - - - - 0.836 predicted gene 12874 [Source:MGI Symbol;Acc:MGI:3651901]
7. Cyp4f17 ENSMUSG00000091586 2 0.836 - - - - - 0.836 cytochrome P450, family 4, subfamily f, polypeptide 17 [Source:MGI Symbol;Acc:MGI:3646233]
8. Gm8317 ENSMUSG00000084276 4 0.836 - - - - - 0.836 predicted gene 8317 [Source:MGI Symbol;Acc:MGI:3646695]
9. Rpl36a-ps3 ENSMUSG00000071141 3 0.836 - - - - - 0.836 ribosomal protein L36A, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642503]
10. Gm11599 ENSMUSG00000084333 7 0.836 - - - - - 0.836 predicted gene 11599 [Source:MGI Symbol;Acc:MGI:3651840]
11. 1700120O09Rik ENSMUSG00000093386 4 0.836 - - - - - 0.836 RIKEN cDNA 1700120O09 gene [Source:MGI Symbol;Acc:MGI:1923906]
12. Gm26843 ENSMUSG00000110559 12 0.836 - - - - - 0.836 predicted gene, 26843 [Source:MGI Symbol;Acc:MGI:5477337]
13. Frmpd3 ENSMUSG00000042425 28 0.836 - - - - - 0.836 FERM and PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:3646547]
14. Cdh7 ENSMUSG00000026312 29 0.836 - - - - - 0.836 cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
15. Gm24959 ENSMUSG00000088549 28 0.836 - - - - - 0.836 predicted gene, 24959 [Source:MGI Symbol;Acc:MGI:5454736]
16. 4930589L23Rik ENSMUSG00000068957 16 0.836 - - - - - 0.836 RIKEN cDNA 4930589L23 gene [Source:MGI Symbol;Acc:MGI:1923129]
17. Gm12050 ENSMUSG00000085856 4 0.836 - - - - - 0.836 predicted gene 12050 [Source:MGI Symbol;Acc:MGI:3652080]
18. Gm5619 ENSMUSG00000099980 5 0.836 - - - - - 0.836 predicted gene 5619 [Source:MGI Symbol;Acc:MGI:3643807]
19. 1700010H22Rik ENSMUSG00000067101 1 0.836 - - - - - 0.836 RIKEN cDNA 1700010H22 gene [Source:MGI Symbol;Acc:MGI:1922750]
20. Gm11645 ENSMUSG00000080895 26 0.836 - - - - - 0.836 predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
21. Gm9372 ENSMUSG00000090474 4 0.836 - - - - - 0.836 predicted gene 9372 [Source:MGI Symbol;Acc:MGI:3645996]
22. Zfp607 34 0.831 - 0.831 - - - - zinc finger proten 607, transcript variant X6
23. Gm10645 ENSMUSG00000074228 6 0.82 - - - - - 0.820 predicted gene 10645 [Source:MGI Symbol;Acc:MGI:3704313]
24. Lrrc7 ENSMUSG00000028176 10 0.815 - - - - - 0.815 leucine rich repeat containing 7 [Source:MGI Symbol;Acc:MGI:2676665]
25. Gm6177 ENSMUSG00000057499 11 0.812 - - - - - 0.812 predicted gene 6177 [Source:MGI Symbol;Acc:MGI:3643753]
26. Gm10369 ENSMUSG00000072573 6 0.812 - - - - - 0.812 predicted gene 10369 [Source:MGI Symbol;Acc:MGI:3642774]
27. Ehhadh ENSMUSG00000022853 8 0.808 - - - - - 0.808 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase [Source:MGI Symbol;Acc:MGI:1277964]
28. Sirpb1c ENSMUSG00000074677, ENSMUSG00000106923 6 0.798 - - - - - 0.798 signal-regulatory protein beta 1C [Source:MGI Symbol;Acc:MGI:3807521]
29. Gm26710 ENSMUSG00000097013 20 0.787 - - - - - 0.787 predicted gene, 26710 [Source:MGI Symbol;Acc:MGI:5477204]
30. Hus1b ENSMUSG00000076430 9 0.787 - - - - - 0.787 HUS1 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2671003]
31. Gsx2 ENSMUSG00000035946 5 0.783 - - - - - 0.783 GS homeobox 2 [Source:MGI Symbol;Acc:MGI:95843]
32. Gm13443 ENSMUSG00000075391 28 0.778 - - - - - 0.778 predicted gene 13443 [Source:MGI Symbol;Acc:MGI:3649615]
33. 4930524L23Rik 4930524L23Rik 18 0.778 - - - - - 0.778
34. Gm25635 ENSMUSG00000064609 19 0.775 - - - - - 0.775 predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
35. Aim1l 28 0.768 - - - - - 0.768 absent in melanoma 1-like, transcript variant X4
36. AF529169 ENSMUSG00000039313 18 0.761 - - - - - 0.761 cDNA sequence AF529169 [Source:MGI Symbol;Acc:MGI:2667167]
37. D130043K22Rik ENSMUSG00000006711 5 0.761 - - - - - 0.761 RIKEN cDNA D130043K22 gene [Source:MGI Symbol;Acc:MGI:3036268]
38. Irgm2 ENSMUSG00000069874 49 0.757 - - 0.757 - - - immunity-related GTPase family M member 2 [Source:MGI Symbol;Acc:MGI:1926262]
39. Gm10516 ENSMUSG00000097316 17 0.755 - - - - - 0.755 predicted gene 10516 [Source:MGI Symbol;Acc:MGI:3641979]
40. Gm12116 ENSMUSG00000087501 7 0.755 - - - - - 0.755 predicted gene 12116 [Source:MGI Symbol;Acc:MGI:3652289]
41. Gm16630 ENSMUSG00000097434 24 0.748 - - - - - 0.748 predicted gene, 16630 [Source:MGI Symbol;Acc:MGI:4439554]
42. Gm26930 ENSMUSG00000102142 113 0.747 - - - - 0.747 - predicted gene, 26930 [Source:MGI Symbol;Acc:MGI:5504045]
43. Gm5812 ENSMUSG00000051639 4 0.744 - - 0.744 - - - predicted gene 5812 [Source:MGI Symbol;Acc:MGI:3644887]
44. Gm15915 ENSMUSG00000085723 101 0.738 - - - - - 0.738 predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
45. Gm11647 Gm11647 13 0.737 - - - - - 0.737
46. Cnnm1 ENSMUSG00000025189 13 0.734 - - - - - 0.734 cyclin M1 [Source:MGI Symbol;Acc:MGI:1891366]
47. Slfn14 ENSMUSG00000082101, ENSMUSG00000116327 14 0.734 - - - - - 0.734 schlafen 14 [Source:MGI Symbol;Acc:MGI:2684866]
48. Gm609 ENSMUSG00000053182 28 0.729 - - - 0.729 - - predicted gene 609 [Source:MGI Symbol;Acc:MGI:2685455]
49. Hist1h2bf ENSMUSG00000069268 26 0.729 0.729 - - - - - histone cluster 1, H2bf [Source:MGI Symbol;Acc:MGI:2448383]
50. Rnf125 ENSMUSG00000033107 15 0.729 - - - 0.729 - - ring finger protein 125 [Source:MGI Symbol;Acc:MGI:1914914]
51. 4632433K11Rik ENSMUSG00000116184 14 0.728 0.728 - - - - - RIKEN cDNA 4632433K11 gene [Source:MGI Symbol;Acc:MGI:1924293]
52. Jazf1 ENSMUSG00000063568 47 0.727 - - 0.727 - - - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
53. Gm10155 ENSMUSG00000066180 21 0.727 - - - - - 0.727 predicted gene 10155 [Source:MGI Symbol;Acc:MGI:3642914]
54. Barx2 ENSMUSG00000032033 28 0.725 0.725 - - - - - BarH-like homeobox 2 [Source:MGI Symbol;Acc:MGI:109617]
55. Muc16 ENSMUSG00000109564 14 0.725 - - - - 0.725 - mucin 16 [Source:MGI Symbol;Acc:MGI:1920982]
56. 1810013D15Rik ENSMUSG00000028177 15 0.724 - - - - - 0.724 RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]
57. Zcchc5 49 0.718 - - 0.718 - - - zinc finger, CCHC domain containing 5
58. Acpp ENSMUSG00000032561 7 0.718 - - 0.718 - - - acid phosphatase, prostate [Source:MGI Symbol;Acc:MGI:1928480]
59. Rassf6 ENSMUSG00000029370 22 0.718 - - 0.718 - - - Ras association (RalGDS/AF-6) domain family member 6 [Source:MGI Symbol;Acc:MGI:1920496]
60. Mir3098 ENSMUSG00000093157 3 0.718 - - 0.718 - - - microRNA 3098 [Source:MGI Symbol;Acc:MGI:4834313]
61. Dmbx1 ENSMUSG00000028707 18 0.717 - - - - - 0.717 diencephalon/mesencephalon homeobox 1 [Source:MGI Symbol;Acc:MGI:2153518]
62. Mid1 ENSMUSG00000035299 189 0.717 - - - - - 0.717 midline 1 [Source:MGI Symbol;Acc:MGI:1100537]
63. Gm14760 ENSMUSG00000081221 37 0.717 - - - - - 0.717 predicted gene 14760 [Source:MGI Symbol;Acc:MGI:3709612]
64. Kcnq2 ENSMUSG00000016346 94 0.716 0.716 - - - - - potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
65. Gm2962 ENSMUSG00000089838 13 0.715 - - - - - 0.715 predicted pseudogene 2962 [Source:MGI Symbol;Acc:MGI:3781140]
66. Zdhhc16 ENSMUSG00000025157 8 0.715 - - - - - 0.715 zinc finger, DHHC domain containing 16 [Source:MGI Symbol;Acc:MGI:1921418]
67. Mlc1 ENSMUSG00000035805 10 0.715 - - - - - 0.715 megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) [Source:MGI Symbol;Acc:MGI:2157910]
68. Rasal1 ENSMUSG00000029602 27 0.714 - - - 0.714 - - RAS protein activator like 1 (GAP1 like) [Source:MGI Symbol;Acc:MGI:1330842]
69. Gm16012 Gm16012 29 0.714 0.714 - - - - -
70. Slc26a4 ENSMUSG00000020651 4 0.711 0.711 - - - - - solute carrier family 26, member 4 [Source:MGI Symbol;Acc:MGI:1346029]
71. 9330136K24Rik ENSMUSG00000097781 47 0.71 - - - - - 0.710 RIKEN cDNA 9330136K24 gene [Source:MGI Symbol;Acc:MGI:2442883]
72. Epha8 ENSMUSG00000028661 19 0.709 0.709 - - - - - Eph receptor A8 [Source:MGI Symbol;Acc:MGI:109378]
73. Zmynd15 ENSMUSG00000040829 10 0.706 - 0.706 - - - - zinc finger, MYND-type containing 15 [Source:MGI Symbol;Acc:MGI:3603821]
74. Chrdl2 ENSMUSG00000030732 17 0.706 - 0.706 - - - - chordin-like 2 [Source:MGI Symbol;Acc:MGI:1916371]
75. Wdr93 ENSMUSG00000039099 10 0.706 - 0.706 - - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
76. Lrrd1 ENSMUSG00000040367 33 0.705 - - 0.705 - - - leucine rich repeats and death domain containing 1 [Source:MGI Symbol;Acc:MGI:3045299]
77. Tmem88b ENSMUSG00000073680 11 0.7 0.700 - - - - - transmembrane protein 88B [Source:MGI Symbol;Acc:MGI:2444329]
78. Cyp7a1 ENSMUSG00000028240 2 0.7 0.700 - - - - - cytochrome P450, family 7, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:106091]
79. Gm10705 ENSMUSG00000074506 1 0.7 0.700 - - - - - predicted gene 10705 [Source:MGI Symbol;Acc:MGI:3708678]
80. AU015836 ENSMUSG00000081044 36 0.7 0.700 - - - - - expressed sequence AU015836 [Source:MGI Symbol;Acc:MGI:2147954]
81. Gm21945 Gm21945 1 0.7 0.700 - - - - -
82. Fam160a1 ENSMUSG00000051000 18 0.7 0.700 - - - - - family with sequence similarity 160, member A1 [Source:MGI Symbol;Acc:MGI:2444746]
83. Gm17226 ENSMUSG00000090270 2 0.7 0.700 - - - - - predicted gene 17226 [Source:MGI Symbol;Acc:MGI:4938053]
84. Zfp939 ENSMUSG00000030424 5 0.7 0.700 - - - - - zinc finger protein 939 [Source:MGI Symbol;Acc:MGI:3036240]
85. Gm20732 ENSMUSG00000093387 1 0.7 0.700 - - - - - predicted gene 20732 [Source:MGI Symbol;Acc:MGI:5318559]
86. Mir351 ENSMUSG00000065503 1 0.7 0.700 - - - - - microRNA 351 [Source:MGI Symbol;Acc:MGI:3619367]
87. Mroh5 ENSMUSG00000072487 4 0.7 0.700 - - - - - maestro heat-like repeat family member 5 [Source:MGI Symbol;Acc:MGI:2685474]
88. Gm8741 ENSMUSG00000091655 1 0.7 0.700 - - - - - predicted gene 8741 [Source:MGI Symbol;Acc:MGI:3644779]
89. Gm13134 ENSMUSG00000084987 1 0.7 0.700 - - - - - predicted gene 13134 [Source:MGI Symbol;Acc:MGI:3650641]
90. Gm14235 ENSMUSG00000085267 1 0.7 0.700 - - - - - predicted gene 14235 [Source:MGI Symbol;Acc:MGI:3702169]
91. Snord16a ENSMUSG00000094411 1 0.7 0.700 - - - - - small nucleolar RNA, C/D box 16A [Source:MGI Symbol;Acc:MGI:3819522]
92. Gm6141 ENSMUSG00000084339 1 0.7 0.700 - - - - - predicted pseudogene 6141 [Source:MGI Symbol;Acc:MGI:3646012]
93. Gm14935 ENSMUSG00000081182 1 0.7 0.700 - - - - - predicted gene 14935 [Source:MGI Symbol;Acc:MGI:3802130]
94. A330040F15Rik ENSMUSG00000086213 6 0.7 0.700 - - - - - RIKEN cDNA A330040F15 gene [Source:MGI Symbol;Acc:MGI:3698434]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA