Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scn11a

Gene Name Gene ID Reads Annotation
Scn11a ENSMUSG00000034115 6 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]







Genes with expression patterns similar to Scn11a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scn11a ENSMUSG00000034115 6 5 1.000 - 1.000 1.000 1.000 1.000 sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]
2. 4930481B07Rik ENSMUSG00000085956 13 1.703 - - 0.874 - - 0.829 RIKEN cDNA 4930481B07 gene [Source:MGI Symbol;Acc:MGI:1922187]
3. 5033403F01Rik ENSMUSG00000096932 4 1.555 0.846 - - - - 0.709 RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
4. Gm12583 ENSMUSG00000082878 23 1 - - - - - 1.000 predicted gene 12583 [Source:MGI Symbol;Acc:MGI:3651485]
5. Gm11984 ENSMUSG00000082333 1 1 - - - - 1.000 - predicted gene 11984 [Source:MGI Symbol;Acc:MGI:3650611]
6. 1700014D04Rik ENSMUSG00000051054 2 1 - - - 1.000 - - RIKEN cDNA 1700014D04 gene [Source:MGI Symbol;Acc:MGI:1921474]
7. Gm13583 ENSMUSG00000086578 10 1 - - - - 1.000 - predicted gene 13583 [Source:MGI Symbol;Acc:MGI:3650462]
8. Cyp2r1 ENSMUSG00000030670 7 1 - - - - - 1.000 cytochrome P450, family 2, subfamily r, polypeptide 1 [Source:MGI Symbol;Acc:MGI:2449771]
9. Slamf1 ENSMUSG00000015316 11 1 - - - - 1.000 - signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
10. Gm5622 ENSMUSG00000079244 2 1 - - - - - 1.000 predicted gene 5622 [Source:MGI Symbol;Acc:MGI:3646060]
11. Pkd1l3 ENSMUSG00000048827 3 1 - - - - - 1.000 polycystic kidney disease 1 like 3 [Source:MGI Symbol;Acc:MGI:2664670]
12. Adam5 ENSMUSG00000031554 2 1 - - - - 1.000 - a disintegrin and metallopeptidase domain 5 [Source:MGI Symbol;Acc:MGI:104730]
13. Mug1 ENSMUSG00000059908 5 1 - - - 1.000 - - murinoglobulin 1 [Source:MGI Symbol;Acc:MGI:99837]
14. Gm15590 ENSMUSG00000058542 2 1 - - - - 1.000 - predicted gene 15590 [Source:MGI Symbol;Acc:MGI:3831433]
15. 4930404A10Rik 4930404A10Rik 3 1 - - - 1.000 - -
16. Gm26560 ENSMUSG00000097029 0 1 - - - - 1.000 - predicted gene, 26560 [Source:MGI Symbol;Acc:MGI:5477054]
17. Obox6 ENSMUSG00000041583 5 1 - - - - 1.000 - oocyte specific homeobox 6 [Source:MGI Symbol;Acc:MGI:2149036]
18. Gm4852 ENSMUSG00000081185 4 1 - - - - 1.000 - predicted pseudogene 4852 [Source:MGI Symbol;Acc:MGI:3643039]
19. Gm15680 ENSMUSG00000090116 3 1 - - - - 1.000 - predicted gene 15680 [Source:MGI Symbol;Acc:MGI:3783122]
20. Gm26566 ENSMUSG00000097078 6 1 - - - - - 1.000 predicted gene, 26566 [Source:MGI Symbol;Acc:MGI:5477060]
21. Gm5873 ENSMUSG00000093651 1 1 - - - - 1.000 - predicted gene 5873 [Source:MGI Symbol;Acc:MGI:3648385]
22. 4930431P03Rik ENSMUSG00000075042 3 1 - - - 1.000 - - RIKEN cDNA 4930431P03 gene [Source:MGI Symbol;Acc:MGI:1921145]
23. Gm13710 ENSMUSG00000087362 7 1 - - - - 1.000 - predicted gene 13710 [Source:MGI Symbol;Acc:MGI:3650894]
24. Pcnxl2 Pcnxl2 7 1 - - - - 1.000 -
25. Gm12383 ENSMUSG00000082238 1 1 - - - - - 1.000 predicted gene 12383 [Source:MGI Symbol;Acc:MGI:3651852]
26. Efhd1 ENSMUSG00000026255 4 1 - - - - 1.000 - EF hand domain containing 1 [Source:MGI Symbol;Acc:MGI:1921607]
27. Gm13857 ENSMUSG00000084965 3 1 - - - - - 1.000 predicted gene 13857 [Source:MGI Symbol;Acc:MGI:3649688]
28. Gm11229 ENSMUSG00000082017 2 1 - - - - - 1.000 predicted gene 11229 [Source:MGI Symbol;Acc:MGI:3651948]
29. Gm25791 ENSMUSG00000065226 1 1 - - - - 1.000 - predicted gene, 25791 [Source:MGI Symbol;Acc:MGI:5455568]
30. Etnppl ENSMUSG00000019232 3 1 - - - 1.000 - - ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
31. Spats1 ENSMUSG00000023935 4 1 - - - 1.000 - - spermatogenesis associated, serine-rich 1 [Source:MGI Symbol;Acc:MGI:1918270]
32. Olfr1043 ENSMUSG00000075201 2 1 - - - 1.000 - - olfactory receptor 1043 [Source:MGI Symbol;Acc:MGI:3030877]
33. Gm13416 ENSMUSG00000084241 3 1 - - - - 1.000 - predicted gene 13416 [Source:MGI Symbol;Acc:MGI:3652158]
34. Hmgn2-ps1 ENSMUSG00000079067 1 1 - - - - - 1.000 high mobility group nucleosomal binding domain 2, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3783162]
35. Hephl1 ENSMUSG00000031936 1 1 - - - - - 1.000 hephaestin-like 1 [Source:MGI Symbol;Acc:MGI:2685355]
36. Crygd ENSMUSG00000067299 3 1 - - - - 1.000 - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
37. Gm16241 Gm16241 10 1 - - - - - 1.000
38. 4930524L23Rik 4930524L23Rik 18 1 - - - 1.000 - -
39. Adap1 ENSMUSG00000056413 23 1 - - - - 1.000 - ArfGAP with dual PH domains 1 [Source:MGI Symbol;Acc:MGI:2442201]
40. Axdnd1 ENSMUSG00000026601 11 1 - - - - 1.000 - axonemal dynein light chain domain containing 1 [Source:MGI Symbol;Acc:MGI:1924602]
41. Fasl ENSMUSG00000000817 4 1 - - - - 1.000 - Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
42. Tex38 ENSMUSG00000044556 11 1 - - - - 1.000 - testis expressed 38 [Source:MGI Symbol;Acc:MGI:1922423]
43. Gm12835 Gm12835 1 1 - - - - 1.000 -
44. Gm11906 ENSMUSG00000085885 0 1 - - - - 1.000 - predicted gene 11906 [Source:MGI Symbol;Acc:MGI:3705114]
45. Cntnap5a ENSMUSG00000070695 8 1 - - - - - 1.000 contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
46. Gm16477 ENSMUSG00000062758 4 1 - - - - - 1.000 predicted pseudogene 16477 [Source:MGI Symbol;Acc:MGI:3646779]
47. Mmp3 ENSMUSG00000043613 0 1 - - - - 1.000 - matrix metallopeptidase 3 [Source:MGI Symbol;Acc:MGI:97010]
48. 3100003L05Rik ENSMUSG00000086254 0 1 - - - - 1.000 - RIKEN cDNA 3100003L05 gene [Source:MGI Symbol;Acc:MGI:1920326]
49. AY702103 ENSMUSG00000067103 4 1 - - - 1.000 - - cDNA sequence AY702103 [Source:MGI Symbol;Acc:MGI:3525105]
50. Gm25060 ENSMUSG00000087999 1 1 - - - - - 1.000 predicted gene, 25060 [Source:MGI Symbol;Acc:MGI:5454837]
51. Gm11425 ENSMUSG00000082419, ENSMUSG00000116156 6 1 - - - 1.000 - - predicted gene 11425 [Source:MGI Symbol;Acc:MGI:3650957]
52. Ect2l ENSMUSG00000071392 1 1 - - - - 1.000 - epithelial cell transforming sequence 2 oncogene-like [Source:MGI Symbol;Acc:MGI:3641723]
53. Tigd4 ENSMUSG00000047819 2 1 - - - - 1.000 - tigger transposable element derived 4 [Source:MGI Symbol;Acc:MGI:2685264]
54. Gm23502 ENSMUSG00000065836 1 1 - - - - 1.000 - predicted gene, 23502 [Source:MGI Symbol;Acc:MGI:5453279]
55. Gm12611 ENSMUSG00000081578 1 1 - - - - - 1.000 predicted gene 12611 [Source:MGI Symbol;Acc:MGI:3650135]
56. Gm15163 ENSMUSG00000085711 4 1 - - - 1.000 - - predicted gene 15163 [Source:MGI Symbol;Acc:MGI:3642430]
57. Gm16894 ENSMUSG00000097899 4 1 - - - - - 1.000 predicted gene, 16894 [Source:MGI Symbol;Acc:MGI:4439818]
58. P2rx6 ENSMUSG00000022758 13 1 - - - - - 1.000 purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
59. Gm7206 ENSMUSG00000082475 7 1 - - - - 1.000 - predicted pseudogene 7206 [Source:MGI Symbol;Acc:MGI:3646634]
60. Gm27027 ENSMUSG00000098004 1 1 - - - - 1.000 - predicted gene, 27027 [Source:MGI Symbol;Acc:MGI:5504142]
61. D6Ertd474e ENSMUSG00000072679 0 1 - - - - 1.000 - DNA segment, Chr 6, ERATO Doi 474, expressed [Source:MGI Symbol;Acc:MGI:1196315]
62. Oc90 ENSMUSG00000015001 0 1 - - - - 1.000 - otoconin 90 [Source:MGI Symbol;Acc:MGI:1313269]
63. 1700034J05Rik ENSMUSG00000040163 1 1 - - - - - 1.000 RIKEN cDNA 1700034J05 gene [Source:MGI Symbol;Acc:MGI:1920594]
64. Mir1949 ENSMUSG00000088059, ENSMUSG00000105743 2 1 - - - - - 1.000 microRNA 1949 [Source:MGI Symbol;Acc:MGI:3837022]
65. Gm10566 ENSMUSG00000073737 1 1 - - - - 1.000 - predicted gene 10566 [Source:MGI Symbol;Acc:MGI:3642220]
66. Gm22304 ENSMUSG00000064622 0 1 - - - - 1.000 - predicted gene, 22304 [Source:MGI Symbol;Acc:MGI:5452081]
67. Gm13216 ENSMUSG00000082013 3 1 - - - 1.000 - - predicted gene 13216 [Source:MGI Symbol;Acc:MGI:3651709]
68. AV039307 ENSMUSG00000087519 4 1 - - - - 1.000 - expressed sequence AV039307 [Source:MGI Symbol;Acc:MGI:2139243]
69. Gm6434 ENSMUSG00000091233 4 1 - - - - - 1.000 predicted gene 6434 [Source:MGI Symbol;Acc:MGI:3648424]
70. Gm13344 ENSMUSG00000087103 10 1 - - - 1.000 - - predicted gene 13344 [Source:MGI Symbol;Acc:MGI:3649239]
71. Olfr99 ENSMUSG00000061972 1 1 - - - - - 1.000 olfactory receptor 99 [Source:MGI Symbol;Acc:MGI:2177482]
72. Gm10558 ENSMUSG00000073656 1 1 - - - - 1.000 - predicted gene 10558 [Source:MGI Symbol;Acc:MGI:3642906]
73. Gm13204 ENSMUSG00000082860 4 1 - - - 1.000 - - predicted gene 13204 [Source:MGI Symbol;Acc:MGI:3651444]
74. Olfr1384 ENSMUSG00000044170 1 1 - - - - 1.000 - olfactory receptor 1384 [Source:MGI Symbol;Acc:MGI:3031218]
75. Trhr ENSMUSG00000038760 1 1 - - - - 1.000 - thyrotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:98824]
76. Ighv1-83 ENSMUSG00000105757 1 1 - - - - 1.000 - immunoglobulin heavy variable 1-83 [Source:MGI Symbol;Acc:MGI:3648939]
77. Mettl7b ENSMUSG00000025347 1 1 - - - - - 1.000 methyltransferase like 7B [Source:MGI Symbol;Acc:MGI:1918914]
78. Krt4 ENSMUSG00000059668 5 1 - - - 1.000 - - keratin 4 [Source:MGI Symbol;Acc:MGI:96701]
79. 4921501E09Rik ENSMUSG00000023350 2 1 - - - 1.000 - - RIKEN cDNA 4921501E09 gene [Source:MGI Symbol;Acc:MGI:1921292]
80. Pnp2 ENSMUSG00000068417 5 1 - - - - 1.000 - purine-nucleoside phosphorylase 2 [Source:MGI Symbol;Acc:MGI:3712328]
81. Rhox2g ENSMUSG00000079629 2 1 - - - - - 1.000 reproductive homeobox 2G [Source:MGI Symbol;Acc:MGI:3648776]
82. Cnga2 ENSMUSG00000005864 8 1 - - - 1.000 - - cyclic nucleotide gated channel alpha 2 [Source:MGI Symbol;Acc:MGI:108040]
83. Gm12051 ENSMUSG00000085021 1 1 - - - - - 1.000 predicted gene 12051 [Source:MGI Symbol;Acc:MGI:3652078]
84. Gm20442 ENSMUSG00000092600 3 1 - - - - 1.000 - predicted gene 20442 [Source:MGI Symbol;Acc:MGI:5141907]
85. Gm14454 Gm14454 1 1 - - - - - 1.000
86. 1700080N15Rik ENSMUSG00000084859 0 1 - - - - 1.000 - RIKEN cDNA 1700080N15 gene [Source:MGI Symbol;Acc:MGI:1920739]
87. Gm20706 ENSMUSG00000093580 2 1 - - - 1.000 - - predicted gene 20706 [Source:MGI Symbol;Acc:MGI:5313153]
88. RP23-296I6.9 RP23-296I6.9 3 1 - - - - - 1.000
89. Rps12-ps1 ENSMUSG00000082746 6 1 - - - - 1.000 - ribosomal protein S12, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1353638]
90. Cryge ENSMUSG00000070870 4 1 - - - - 1.000 - crystallin, gamma E [Source:MGI Symbol;Acc:MGI:88525]
91. Gm15179 ENSMUSG00000085653 2 1 - - - - 1.000 - predicted gene 15179 [Source:MGI Symbol;Acc:MGI:3705125]
92. Gm13999 ENSMUSG00000087458 3 1 - - - - - 1.000 predicted gene 13999 [Source:MGI Symbol;Acc:MGI:3651905]
93. Gm17709 ENSMUSG00000091952 2 1 - - - 1.000 - - predicted gene, 17709 [Source:MGI Symbol;Acc:MGI:4937343]
94. Gpr119 ENSMUSG00000051209 3 1 - - - 1.000 - - G-protein coupled receptor 119 [Source:MGI Symbol;Acc:MGI:2668412]
95. Hao1 ENSMUSG00000027261 2 1 - - - - 1.000 - hydroxyacid oxidase 1, liver [Source:MGI Symbol;Acc:MGI:96011]
96. Gm15731 ENSMUSG00000086528 4 1 - - - - - 1.000 predicted gene 15731 [Source:MGI Symbol;Acc:MGI:3783174]
97. Lif ENSMUSG00000034394 1 1 - - - - - 1.000 leukemia inhibitory factor [Source:MGI Symbol;Acc:MGI:96787]
98. Gm11557 ENSMUSG00000082900 5 1 - - - - 1.000 - predicted gene 11557 [Source:MGI Symbol;Acc:MGI:3651826]
99. Gm12939 ENSMUSG00000081609 2 1 - - - 1.000 - - predicted gene 12939 [Source:MGI Symbol;Acc:MGI:3652092]
100. Gm25313 ENSMUSG00000095738 7 1 - - - - - 1.000 predicted gene, 25313 [Source:MGI Symbol;Acc:MGI:5455090]

There are 263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA