Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scfd1

Gene Name Gene ID Reads Annotation
Scfd1 ENSMUSG00000020952 1076 Sec1 family domain containing 1 [Source:MGI Symbol;Acc:MGI:1924233]







Genes with expression patterns similar to Scfd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scfd1 ENSMUSG00000020952 1076 6 1.000 1.000 1.000 1.000 1.000 1.000 Sec1 family domain containing 1 [Source:MGI Symbol;Acc:MGI:1924233]
2. Scamp2 ENSMUSG00000040188 1163 0.897 - 0.897 - - - - secretory carrier membrane protein 2 [Source:MGI Symbol;Acc:MGI:1346518]
3. Leprotl1 ENSMUSG00000031513 1832 0.892 - 0.892 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
4. Rnasel ENSMUSG00000066800 396 0.887 - 0.887 - - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
5. Cgrrf1 ENSMUSG00000055128 994 0.876 - 0.876 - - - - cell growth regulator with ring finger domain 1 [Source:MGI Symbol;Acc:MGI:1916368]
6. Ankrd13c ENSMUSG00000039988 429 0.876 - 0.876 - - - - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
7. Alg8 ENSMUSG00000035704 1502 0.875 - 0.875 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
8. Nol9 ENSMUSG00000028948 3331 0.875 - 0.875 - - - - nucleolar protein 9 [Source:MGI Symbol;Acc:MGI:1921285]
9. Gm11539 ENSMUSG00000083337 746 0.873 - 0.873 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
10. A130010J15Rik ENSMUSG00000079144 763 0.873 - 0.873 - - - - RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
11. Thsd1 ENSMUSG00000031480 416 0.872 - 0.872 - - - - thrombospondin, type I, domain 1 [Source:MGI Symbol;Acc:MGI:1929096]
12. Parn ENSMUSG00000022685 568 0.87 - 0.870 - - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:MGI Symbol;Acc:MGI:1921358]
13. Golph3l ENSMUSG00000046519 687 0.869 - 0.869 - - - - golgi phosphoprotein 3-like [Source:MGI Symbol;Acc:MGI:1917129]
14. Upf3a ENSMUSG00000038398 402 0.867 - 0.867 - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
15. Zbtb34 ENSMUSG00000068966 835 0.867 - 0.867 - - - - zinc finger and BTB domain containing 34 [Source:MGI Symbol;Acc:MGI:2685195]
16. Mtmr3 ENSMUSG00000034354 1240 0.865 - 0.865 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
17. Mettl7a3 ENSMUSG00000058057 214 0.864 - 0.864 - - - - methyltransferase like 7A3 [Source:MGI Symbol;Acc:MGI:3710670]
18. Khnyn ENSMUSG00000047153 196 0.858 - 0.858 - - - - KH and NYN domain containing [Source:MGI Symbol;Acc:MGI:2451333]
19. Vat1l ENSMUSG00000046844 448 0.857 - 0.857 - - - - vesicle amine transport protein 1 like [Source:MGI Symbol;Acc:MGI:2142534]
20. Pnpla8 ENSMUSG00000036257 649 0.856 - 0.856 - - - - patatin-like phospholipase domain containing 8 [Source:MGI Symbol;Acc:MGI:1914702]
21. Hist1h4i ENSMUSG00000060639 582 0.856 - 0.856 - - - - histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
22. Wwc1 ENSMUSG00000018849 410 0.855 - 0.855 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
23. Alx3 ENSMUSG00000014603 384 0.854 - 0.854 - - - - aristaless-like homeobox 3 [Source:MGI Symbol;Acc:MGI:1277097]
24. Gm13033 ENSMUSG00000083816 71 0.854 - 0.854 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
25. Bod1l ENSMUSG00000061755 2689 0.854 - 0.854 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
26. Gm16287 ENSMUSG00000073739 273 0.853 - 0.853 - - - - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
27. Ccr5 ENSMUSG00000079227 87 0.853 - 0.853 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
28. Trabd ENSMUSG00000015363 770 0.853 - 0.853 - - - - TraB domain containing [Source:MGI Symbol;Acc:MGI:1915226]
29. Ctla2b ENSMUSG00000074874 66 0.852 - 0.852 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
30. Afmid ENSMUSG00000017718 252 0.852 - 0.852 - - - - arylformamidase [Source:MGI Symbol;Acc:MGI:2448704]
31. Taf3 ENSMUSG00000025782 1481 0.852 - 0.852 - - - - TATA-box binding protein associated factor 3 [Source:MGI Symbol;Acc:MGI:2388097]
32. Mcmdc2 ENSMUSG00000046101 117 0.852 - 0.852 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
33. Gm15954 Gm15954 49 0.851 - 0.851 - - - -
34. Celf3 ENSMUSG00000028137 141 0.85 - 0.850 - - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
35. Ccm2 ENSMUSG00000000378 851 0.85 - 0.850 - - - - cerebral cavernous malformation 2 [Source:MGI Symbol;Acc:MGI:2384924]
36. Snx5 ENSMUSG00000027423 3464 0.85 - 0.850 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
37. Eef1a2 ENSMUSG00000016349 41 0.85 - 0.850 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
38. Snora23 ENSMUSG00000064451 53 0.85 - 0.850 - - - - small nucleolar RNA, H/ACA box 23 [Source:MGI Symbol;Acc:MGI:3819494]
39. Lman2l ENSMUSG00000001143 1103 0.849 - 0.849 - - - - lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
40. Sigmar1 ENSMUSG00000036078 1307 0.848 - 0.848 - - - - sigma non-opioid intracellular receptor 1 [Source:MGI Symbol;Acc:MGI:1195268]
41. Stc2 ENSMUSG00000020303 138 0.848 - 0.848 - - - - stanniocalcin 2 [Source:MGI Symbol;Acc:MGI:1316731]
42. BC027582 BC027582 61 0.848 - 0.848 - - - -
43. Wash Wash 803 0.848 - 0.848 - - - -
44. Gm26869 ENSMUSG00000097879 104 0.848 - 0.848 - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
45. Vps16 ENSMUSG00000027411 1174 0.847 - 0.847 - - - - VSP16 CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:2136772]
46. Zfp445 ENSMUSG00000047036 205 0.847 - 0.847 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
47. Creld1 ENSMUSG00000030284 502 0.846 - 0.846 - - - - cysteine-rich with EGF-like domains 1 [Source:MGI Symbol;Acc:MGI:2152539]
48. Chst2 ENSMUSG00000033350 662 0.844 - 0.844 - - - - carbohydrate sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:1891160]
49. Ninj1 ENSMUSG00000037966 493 0.844 - 0.844 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
50. Emc1 ENSMUSG00000078517 293 0.844 - 0.844 - - - - ER membrane protein complex subunit 1 [Source:MGI Symbol;Acc:MGI:2443696]
51. Pls1 ENSMUSG00000049493 175 0.844 - 0.844 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
52. Mavs ENSMUSG00000037523 581 0.844 - 0.844 - - - - mitochondrial antiviral signaling protein [Source:MGI Symbol;Acc:MGI:2444773]
53. AI987944 ENSMUSG00000056383 1199 0.844 - 0.844 - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
54. Rep15 ENSMUSG00000040121 131 0.842 - 0.842 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
55. B3gntl1 ENSMUSG00000046605 165 0.84 - 0.840 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:MGI Symbol;Acc:MGI:2441705]
56. Pld1 ENSMUSG00000027695 229 0.84 - 0.840 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
57. Ccdc132 Ccdc132 1261 0.839 - 0.839 - - - -
58. Ldoc1l 651 0.838 - 0.838 - - - - leucine zipper, down-regulated in cancer 1-like
59. Gm13422 ENSMUSG00000084098 313 0.838 - 0.838 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
60. R3hcc1l ENSMUSG00000025184 576 0.838 - 0.838 - - - - R3H domain and coiled-coil containing 1 like [Source:MGI Symbol;Acc:MGI:1196316]
61. Stim1 ENSMUSG00000030987 220 0.838 - 0.838 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
62. Krba1 ENSMUSG00000042810 737 0.837 - 0.837 - - - - KRAB-A domain containing 1 [Source:MGI Symbol;Acc:MGI:1925077]
63. Ank1 ENSMUSG00000031543 443 0.837 - 0.837 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]
64. Trip10 ENSMUSG00000019487 485 0.837 - 0.837 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
65. Cdca7l ENSMUSG00000021175 640 0.835 - 0.835 - - - - cell division cycle associated 7 like [Source:MGI Symbol;Acc:MGI:2384982]
66. Phf12 ENSMUSG00000037791 554 0.835 - 0.835 - - - - PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
67. Ndst2 ENSMUSG00000039308 402 0.835 - 0.835 - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:MGI Symbol;Acc:MGI:97040]
68. Mlycd ENSMUSG00000074064 268 0.835 - 0.835 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
69. Nbn ENSMUSG00000028224 1101 0.835 - 0.835 - - - - nibrin [Source:MGI Symbol;Acc:MGI:1351625]
70. Mbd1 ENSMUSG00000024561 619 0.833 - 0.833 - - - - methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
71. Senp3 ENSMUSG00000005204 505 0.832 - 0.832 - - - - SUMO/sentrin specific peptidase 3 [Source:MGI Symbol;Acc:MGI:2158736]
72. Ccbl1 Ccbl1 330 0.832 - 0.832 - - - -
73. Gm14227 ENSMUSG00000082596 93 0.831 - 0.831 - - - - predicted gene 14227 [Source:MGI Symbol;Acc:MGI:3649437]
74. Ercc6 ENSMUSG00000054051 674 0.83 - 0.830 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]
75. Mark1 ENSMUSG00000026620 656 0.83 - 0.830 - - - - MAP/microtubule affinity regulating kinase 1 [Source:MGI Symbol;Acc:MGI:2664902]
76. Abhd5 ENSMUSG00000032540 461 0.83 - 0.830 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
77. Asb7 ENSMUSG00000030509 1675 0.83 - 0.830 - - - - ankyrin repeat and SOCS box-containing 7 [Source:MGI Symbol;Acc:MGI:2152835]
78. Zfp551 ENSMUSG00000034071 101 0.829 - 0.829 - - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
79. Tuba1c ENSMUSG00000043091 6320 0.829 - 0.829 - - - - tubulin, alpha 1C [Source:MGI Symbol;Acc:MGI:1095409]
80. Med8 ENSMUSG00000006392 1655 0.828 - 0.828 - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
81. St3gal6 ENSMUSG00000022747 332 0.828 - 0.828 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:1888707]
82. Sirt4 ENSMUSG00000029524 437 0.828 - 0.828 - - - - sirtuin 4 [Source:MGI Symbol;Acc:MGI:1922637]
83. Wdr60 ENSMUSG00000042050 672 0.828 - 0.828 - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
84. Akap7 ENSMUSG00000039166 948 0.827 - 0.827 - - - - A kinase (PRKA) anchor protein 7 [Source:MGI Symbol;Acc:MGI:1859150]
85. Trub2 ENSMUSG00000039826 782 0.827 - 0.827 - - - - TruB pseudouridine (psi) synthase family member 2 [Source:MGI Symbol;Acc:MGI:2442186]
86. Nif3l1 ENSMUSG00000026036 1546 0.827 - 0.827 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
87. Gm10068 Gm10068 399 0.826 - 0.826 - - - -
88. Tmsb15b1 ENSMUSG00000089768 199 0.826 - 0.826 - - - - thymosin beta 15b1 [Source:MGI Symbol;Acc:MGI:3843059]
89. Dusp23 ENSMUSG00000026544 310 0.826 - 0.826 - - - - dual specificity phosphatase 23 [Source:MGI Symbol;Acc:MGI:1915690]
90. Tmem127 ENSMUSG00000034850 691 0.825 - 0.825 - - - - transmembrane protein 127 [Source:MGI Symbol;Acc:MGI:1916720]
91. Psmd12 ENSMUSG00000020720 2897 0.825 - 0.825 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:MGI Symbol;Acc:MGI:1914247]
92. Nup43 ENSMUSG00000040034, ENSMUSG00000116037 1278 0.824 - 0.824 - - - - nucleoporin 43 [Source:MGI Symbol;Acc:MGI:1917162]
93. Hexdc ENSMUSG00000039307 420 0.823 - 0.823 - - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:MGI Symbol;Acc:MGI:3605542]
94. Wasl ENSMUSG00000029684 2573 0.823 - 0.823 - - - - Wiskott-Aldrich syndrome-like (human) [Source:MGI Symbol;Acc:MGI:1920428]
95. Upk1a ENSMUSG00000006313 293 0.823 - 0.823 - - - - uroplakin 1A [Source:MGI Symbol;Acc:MGI:98911]
96. Gm6807 ENSMUSG00000057605 479 0.821 - 0.821 - - - - predicted gene 6807 [Source:MGI Symbol;Acc:MGI:3649145]
97. Snap23 ENSMUSG00000027287 1315 0.82 - 0.820 - - - - synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]
98. Dlx2 ENSMUSG00000023391 429 0.82 - 0.820 - - - - distal-less homeobox 2 [Source:MGI Symbol;Acc:MGI:94902]
99. Fam73a 1247 0.819 - 0.819 - - - - family with sequence similarity 73, member A, transcript variant X2
100. Agpat1 ENSMUSG00000034254 440 0.818 - 0.818 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) [Source:MGI Symbol;Acc:MGI:1932075]

There are 240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA