Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scarna13

Gene Name Gene ID Reads Annotation
Scarna13 ENSMUSG00000088789 9 small Cajal body-specific RNA 1 [Source:MGI Symbol;Acc:MGI:4360027]







Genes with expression patterns similar to Scarna13

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scarna13 ENSMUSG00000088789 9 4 1.000 1.000 1.000 1.000 - - small Cajal body-specific RNA 1 [Source:MGI Symbol;Acc:MGI:4360027]
2. Zp3 ENSMUSG00000004948 2 1 - - - 1.000 - - zona pellucida glycoprotein 3 [Source:MGI Symbol;Acc:MGI:99215]
3. Gm26610 ENSMUSG00000097674 11 1 - - - 1.000 - - predicted gene, 26610 [Source:MGI Symbol;Acc:MGI:5477104]
4. Mansc4 ENSMUSG00000072662 11 1 - 1.000 - - - - MANSC domain containing 4 [Source:MGI Symbol;Acc:MGI:3645619]
5. Bcl2a1a ENSMUSG00000102037 1 1 - - - 1.000 - - B cell leukemia/lymphoma 2 related protein A1a [Source:MGI Symbol;Acc:MGI:102687]
6. Gm15750 ENSMUSG00000083921 2 1 - - - 1.000 - - predicted gene 15750 [Source:MGI Symbol;Acc:MGI:3783192]
7. 5830418P13Rik ENSMUSG00000086236 1 1 - - - 1.000 - - RIKEN cDNA 5830418P13 gene [Source:MGI Symbol;Acc:MGI:3604110]
8. Bhlha15 ENSMUSG00000052271 9 1 - - - 1.000 - - basic helix-loop-helix family, member a15 [Source:MGI Symbol;Acc:MGI:891976]
9. Crybb1 ENSMUSG00000029343 1 1 - - - 1.000 - - crystallin, beta B1 [Source:MGI Symbol;Acc:MGI:104992]
10. Gm10160 ENSMUSG00000066378 2 1 - - - 1.000 - - predicted gene 10160 [Source:MGI Symbol;Acc:MGI:3642884]
11. Acsm1 ENSMUSG00000033533 2 1 - - - 1.000 - - acyl-CoA synthetase medium-chain family member 1 [Source:MGI Symbol;Acc:MGI:2152200]
12. Gm5257 ENSMUSG00000082012 4 1 - 1.000 - - - - predicted gene 5257 [Source:MGI Symbol;Acc:MGI:3647791]
13. Gm15745 ENSMUSG00000080868 1 1 - - - 1.000 - - predicted gene 15745 [Source:MGI Symbol;Acc:MGI:3783187]
14. Pp2d1 ENSMUSG00000044957 2 1 - - - 1.000 - - protein phosphatase 2C-like domain containing 1 [Source:MGI Symbol;Acc:MGI:3612067]
15. Tmem74 ENSMUSG00000054409 6 1 - - - 1.000 - - transmembrane protein 74 [Source:MGI Symbol;Acc:MGI:2443417]
16. B230104C08Rik B230104C08Rik 1 1 - - - 1.000 - -
17. Gm8302 ENSMUSG00000081773 4 1 - - - 1.000 - - predicted gene 8302 [Source:MGI Symbol;Acc:MGI:3643802]
18. Pon1 ENSMUSG00000002588 3 1 - - - 1.000 - - paraoxonase 1 [Source:MGI Symbol;Acc:MGI:103295]
19. Igfals ENSMUSG00000046070 8 1 - 1.000 - - - - insulin-like growth factor binding protein, acid labile subunit [Source:MGI Symbol;Acc:MGI:107973]
20. Il3ra ENSMUSG00000068758 25 1 - - - 1.000 - - interleukin 3 receptor, alpha chain [Source:MGI Symbol;Acc:MGI:96553]
21. Gm18709 ENSMUSG00000097895 2 1 - - - 1.000 - - predicted gene, 18709 [Source:MGI Symbol;Acc:MGI:5010894]
22. Il10 ENSMUSG00000016529 1 1 - - - 1.000 - - interleukin 10 [Source:MGI Symbol;Acc:MGI:96537]
23. Gm4211 ENSMUSG00000097146 1 1 - - - 1.000 - - predicted gene 4211 [Source:MGI Symbol;Acc:MGI:3782387]
24. Gm11722 ENSMUSG00000086442 7 1 - - - 1.000 - - predicted gene 11722 [Source:MGI Symbol;Acc:MGI:3649870]
25. Olfr453 ENSMUSG00000095831 1 1 - - - 1.000 - - olfactory receptor 453 [Source:MGI Symbol;Acc:MGI:3030287]
26. Catsper4 ENSMUSG00000048003 7 1 - - - 1.000 - - cation channel, sperm associated 4 [Source:MGI Symbol;Acc:MGI:3043288]
27. Gm15927 ENSMUSG00000085039 4 1 - - - 1.000 - - predicted gene 15927 [Source:MGI Symbol;Acc:MGI:3801889]
28. Mep1b ENSMUSG00000024313 3 1 - - - 1.000 - - meprin 1 beta [Source:MGI Symbol;Acc:MGI:96964]
29. Kctd4 ENSMUSG00000046523 3 1 - - - 1.000 - - potassium channel tetramerisation domain containing 4 [Source:MGI Symbol;Acc:MGI:1914766]
30. Oas1f ENSMUSG00000053765 1 1 - - - 1.000 - - 2'-5' oligoadenylate synthetase 1F [Source:MGI Symbol;Acc:MGI:2180855]
31. Gm15677 ENSMUSG00000086814 1 1 - - - 1.000 - - predicted gene 15677 [Source:MGI Symbol;Acc:MGI:3783119]
32. Echdc1 ENSMUSG00000019883 5 1 - - - 1.000 - - enoyl Coenzyme A hydratase domain containing 1 [Source:MGI Symbol;Acc:MGI:1277169]
33. Olfr1307 ENSMUSG00000094747 1 1 - - - 1.000 - - olfactory receptor 1307 [Source:MGI Symbol;Acc:MGI:3031141]
34. Abcb1a ENSMUSG00000040584 5 1 - 1.000 - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 1A [Source:MGI Symbol;Acc:MGI:97570]
35. Cyct ENSMUSG00000056436 7 1 - - - 1.000 - - cytochrome c, testis [Source:MGI Symbol;Acc:MGI:88579]
36. Gm16253 ENSMUSG00000087610 1 1 - - - 1.000 - - predicted gene 16253 [Source:MGI Symbol;Acc:MGI:3826531]
37. Ttc29 ENSMUSG00000037101 1 1 - - - 1.000 - - tetratricopeptide repeat domain 29 [Source:MGI Symbol;Acc:MGI:1920551]
38. Gm12364 ENSMUSG00000086792 1 1 - - - 1.000 - - predicted gene 12364 [Source:MGI Symbol;Acc:MGI:3649785]
39. C230037L18Rik ENSMUSG00000084915 7 1 - - - 1.000 - - RIKEN cDNA C230037L18 gene [Source:MGI Symbol;Acc:MGI:3697701]
40. Pik3r6 ENSMUSG00000046207 21 1 - - - 1.000 - - phosphoinositide-3-kinase regulatory subunit 5 [Source:MGI Symbol;Acc:MGI:2144613]
41. Jakmip1 ENSMUSG00000063646, ENSMUSG00000113373 41 0.978 - - 0.978 - - - novel protein
42. Hoxa3 ENSMUSG00000079560 57 0.966 - - 0.966 - - - homeobox A3 [Source:MGI Symbol;Acc:MGI:96175]
43. Kcne1 ENSMUSG00000039639 6 0.95 - 0.950 - - - - potassium voltage-gated channel, Isk-related subfamily, member 1 [Source:MGI Symbol;Acc:MGI:96673]
44. Ccr9 ENSMUSG00000029530 12 0.931 - - 0.931 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
45. Gm24611 ENSMUSG00000065206 4 0.931 - - 0.931 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
46. Wnt3a ENSMUSG00000009900 70 0.931 - - 0.931 - - - wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
47. Atoh1 ENSMUSG00000073043 396 0.931 - - 0.931 - - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
48. Ddn ENSMUSG00000059213 51 0.931 - - 0.931 - - - dendrin [Source:MGI Symbol;Acc:MGI:108101]
49. Gm12412 ENSMUSG00000083685 7 0.931 - - 0.931 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
50. Wnt1 ENSMUSG00000022997 961 0.931 - - 0.931 - - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
51. Gm16585 ENSMUSG00000089657 13 0.931 - - 0.931 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
52. Barhl1 ENSMUSG00000026805 447 0.93 - - 0.930 - - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
53. 3100002H09Rik ENSMUSG00000051219 11 0.93 - - 0.930 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
54. Nlrc4 ENSMUSG00000039193 9 0.929 - - 0.929 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
55. Gm11280 ENSMUSG00000085393 24 0.928 - - 0.928 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
56. Ddx43 ENSMUSG00000070291 17 0.928 - - 0.928 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
57. 2310042D19Rik 2310042D19Rik 7 0.927 - - 0.927 - - -
58. Gm24049 ENSMUSG00000076364 20 0.926 - - 0.926 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
59. Gm973 ENSMUSG00000047361 11 0.924 - - 0.924 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
60. Gm11615 ENSMUSG00000085083 13 0.924 - - 0.924 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
61. Tldc1 ENSMUSG00000034105 8 0.923 - - 0.923 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
62. Gm15644 ENSMUSG00000084154 47 0.923 - - - 0.923 - - predicted gene 15644 [Source:MGI Symbol;Acc:MGI:3783088]
63. Gm14634 ENSMUSG00000085891 18 0.922 - - 0.922 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
64. Fn3k ENSMUSG00000025175 18 0.922 - - 0.922 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
65. Hist1h2bg ENSMUSG00000058385 62 0.919 - - 0.919 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
66. Gm15366 ENSMUSG00000080726 11 0.917 - - 0.917 - - - predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
67. Fbxo2 ENSMUSG00000041556 15 0.917 - - 0.917 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
68. Vcl ENSMUSG00000021823 49 0.917 - - 0.917 - - - vinculin [Source:MGI Symbol;Acc:MGI:98927]
69. Hectd2 ENSMUSG00000041180 34 0.916 - - 0.916 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2442663]
70. Rgs9 ENSMUSG00000020599 31 0.915 - - 0.915 - - - regulator of G-protein signaling 9 [Source:MGI Symbol;Acc:MGI:1338824]
71. Rxfp2 ENSMUSG00000053368 56 0.915 - - 0.915 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
72. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.915 - - 0.915 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
73. Pla2g7 ENSMUSG00000023913 28 0.914 - - 0.914 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
74. Gm7860 ENSMUSG00000082535 15 0.914 - - 0.914 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
75. Gm24616 ENSMUSG00000065208 48 0.904 - - 0.904 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
76. Gm25635 ENSMUSG00000064609 19 0.904 - - 0.904 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
77. Rccd1 ENSMUSG00000038930 21 0.903 - - 0.903 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
78. Fam71e1 ENSMUSG00000051113 33 0.903 - - 0.903 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
79. Gm26801 ENSMUSG00000097892 60 0.902 - - 0.902 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
80. Cav2 ENSMUSG00000000058 36 0.9 - - 0.900 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
81. Dennd2d ENSMUSG00000027901 12 0.899 - - 0.899 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
82. Wdr65 Wdr65 40 0.899 - - 0.899 - - -
83. Sep-01 Sep-01 32 0.898 - - 0.898 - - -
84. Gm13704 Gm13704 18 0.897 - 0.897 - - - -
85. Wnt9a ENSMUSG00000000126 90 0.894 - - 0.894 - - - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
86. Kcne4 ENSMUSG00000047330 52 0.891 - - 0.891 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
87. Tmc2 ENSMUSG00000060332 36 0.891 - - 0.891 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
88. Gm10349 Gm10349 8 0.891 - 0.891 - - - -
89. Hist1h3b ENSMUSG00000069267 24 0.889 - - 0.889 - - - histone cluster 1, H3b [Source:MGI Symbol;Acc:MGI:2448319]
90. Zfp663 ENSMUSG00000056824 62 0.889 - - 0.889 - - - zinc finger protein 663 [Source:MGI Symbol;Acc:MGI:2685854]
91. Cntnap2 ENSMUSG00000039419 230 0.888 - - 0.888 - - - contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]
92. Gm27032 ENSMUSG00000098051 80 0.888 - - 0.888 - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
93. 1700030J22Rik ENSMUSG00000031847 46 0.887 - - 0.887 - - - RIKEN cDNA 1700030J22 gene [Source:MGI Symbol;Acc:MGI:1916778]
94. Gm9796 ENSMUSG00000045075 14 0.887 - - - 0.887 - - predicted gene 9796 [Source:MGI Symbol;Acc:MGI:3648412]
95. Gm12543 ENSMUSG00000080772 12 0.887 - - - 0.887 - - predicted gene 12543 [Source:MGI Symbol;Acc:MGI:3649591]
96. 1700102P08Rik ENSMUSG00000032611 65 0.884 0.884 - - - - - RIKEN cDNA 1700102P08 gene [Source:MGI Symbol;Acc:MGI:2148248]
97. Spag1 ENSMUSG00000037617 387 0.88 - - 0.880 - - - sperm associated antigen 1 [Source:MGI Symbol;Acc:MGI:1349387]
98. Gm16701 ENSMUSG00000097823, ENSMUSG00000102548 29 0.878 - - 0.878 - - - predicted gene, 16701 [Source:MGI Symbol;Acc:MGI:4439625]
99. Syp ENSMUSG00000031144 41 0.878 - - 0.878 - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
100. Rspo3 ENSMUSG00000019880 485 0.877 - - 0.877 - - - R-spondin 3 [Source:MGI Symbol;Acc:MGI:1920030]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA