Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scarf1

Gene Name Gene ID Reads Annotation
Scarf1 ENSMUSG00000038188 128 scavenger receptor class F, member 1 [Source:MGI Symbol;Acc:MGI:2449455]







Genes with expression patterns similar to Scarf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scarf1 ENSMUSG00000038188 128 5 1.000 1.000 1.000 1.000 - 1.000 scavenger receptor class F, member 1 [Source:MGI Symbol;Acc:MGI:2449455]
2. Sh3tc2 ENSMUSG00000045629 69 1.697 - - 0.912 - - 0.785 SH3 domain and tetratricopeptide repeats 2 [Source:MGI Symbol;Acc:MGI:2444417]
3. Kcnk3 ENSMUSG00000049265 209 1.45 - - 0.738 - - 0.712 potassium channel, subfamily K, member 3 [Source:MGI Symbol;Acc:MGI:1100509]
4. Prickle3 ENSMUSG00000031145 310 0.968 - - 0.968 - - - prickle planar cell polarity protein 3 [Source:MGI Symbol;Acc:MGI:1859635]
5. Creb3l3 ENSMUSG00000035041 46 0.953 - - 0.953 - - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
6. Gm10604 ENSMUSG00000073995 10 0.953 - - 0.953 - - - predicted gene 10604 [Source:MGI Symbol;Acc:MGI:3642593]
7. Gm26600 ENSMUSG00000097226 9 0.953 - - 0.953 - - - predicted gene, 26600 [Source:MGI Symbol;Acc:MGI:5477094]
8. Atp6ap1l ENSMUSG00000078958 12 0.953 - - 0.953 - - - ATPase, H+ transporting, lysosomal accessory protein 1-like [Source:MGI Symbol;Acc:MGI:3648665]
9. Gm13302 ENSMUSG00000084010 20 0.95 - - 0.950 - - - predicted gene 13302 [Source:MGI Symbol;Acc:MGI:3705777]
10. Fxyd5 ENSMUSG00000009687 116 0.948 - - 0.948 - - - FXYD domain-containing ion transport regulator 5 [Source:MGI Symbol;Acc:MGI:1201785]
11. Gm7008 ENSMUSG00000035983 55 0.948 - - 0.948 - - - predicted gene 7008 [Source:MGI Symbol;Acc:MGI:3647211]
12. Gm13473 ENSMUSG00000083776 114 0.948 - - 0.948 - - - predicted gene 13473 [Source:MGI Symbol;Acc:MGI:3652338]
13. Gm10719 ENSMUSG00000095547 349 0.946 - - 0.946 - - - predicted gene 10719 [Source:MGI Symbol;Acc:MGI:3641690]
14. Optn ENSMUSG00000026672 36 0.946 - - 0.946 - - - optineurin [Source:MGI Symbol;Acc:MGI:1918898]
15. 2510046G10Rik ENSMUSG00000066175 41 0.945 - - 0.945 - - - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
16. Gon4l ENSMUSG00000054199 31 0.945 - - 0.945 - - - gon-4-like (C.elegans) [Source:MGI Symbol;Acc:MGI:1917579]
17. Fam189a2 ENSMUSG00000071604 71 0.945 - - 0.945 - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
18. Asb9 ENSMUSG00000031384 22 0.944 - - 0.944 - - - ankyrin repeat and SOCS box-containing 9 [Source:MGI Symbol;Acc:MGI:1916549]
19. Tmem170 ENSMUSG00000031953 67 0.941 - - 0.941 - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
20. Gm12668 ENSMUSG00000085817 60 0.939 - - 0.939 - - - predicted gene 12668 [Source:MGI Symbol;Acc:MGI:3651936]
21. Zmym6 ENSMUSG00000042408 218 0.937 - - 0.937 - - - zinc finger, MYM-type 6 [Source:MGI Symbol;Acc:MGI:106505]
22. 4930556M19Rik ENSMUSG00000096971 76 0.928 - - 0.928 - - - RIKEN cDNA 4930556M19 gene [Source:MGI Symbol;Acc:MGI:1922509]
23. Pam16 ENSMUSG00000014301 14 0.925 - - 0.925 - - - presequence translocase-asssociated motor 16 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913699]
24. Kcnj15 ENSMUSG00000062609 31 0.925 - - 0.925 - - - potassium inwardly-rectifying channel, subfamily J, member 15 [Source:MGI Symbol;Acc:MGI:1310000]
25. Ankrd29 ENSMUSG00000057766 352 0.921 - - 0.921 - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
26. Gm22 71 0.92 - - 0.920 - - - predicted gene 22, transcript variant X1
27. Rpl30-ps3 ENSMUSG00000080873 111 0.918 - - 0.918 - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
28. Fam211b Fam211b 102 0.917 - - 0.917 - - -
29. Fmod ENSMUSG00000041559 161 0.911 - - 0.911 - - - fibromodulin [Source:MGI Symbol;Acc:MGI:1328364]
30. Abcg4 ENSMUSG00000032131 186 0.911 - - 0.911 - - - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
31. Tead4 ENSMUSG00000030353 186 0.91 - - 0.910 - - - TEA domain family member 4 [Source:MGI Symbol;Acc:MGI:106907]
32. Cacng2 ENSMUSG00000019146 84 0.909 - - 0.909 - - - calcium channel, voltage-dependent, gamma subunit 2 [Source:MGI Symbol;Acc:MGI:1316660]
33. Gm13423 ENSMUSG00000081648 80 0.908 - - 0.908 - - - predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
34. Rgcc ENSMUSG00000022018 307 0.908 - - 0.908 - - - regulator of cell cycle [Source:MGI Symbol;Acc:MGI:1913464]
35. Rhox5 ENSMUSG00000095180, ENSMUSG00000097306 136 0.906 - - 0.906 - - - reproductive homeobox 5 [Source:MGI Symbol;Acc:MGI:97538]
36. Gdf2 ENSMUSG00000072625 45 0.904 - - 0.904 - - - growth differentiation factor 2 [Source:MGI Symbol;Acc:MGI:1321394]
37. Gngt2 ENSMUSG00000038811 176 0.903 - - 0.903 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 [Source:MGI Symbol;Acc:MGI:893584]
38. Zfp426 ENSMUSG00000059475 497 0.9 - - 0.900 - - - zinc finger protein 426 [Source:MGI Symbol;Acc:MGI:1920248]
39. Nceh1 ENSMUSG00000027698 135 0.9 - - 0.900 - - - neutral cholesterol ester hydrolase 1 [Source:MGI Symbol;Acc:MGI:2443191]
40. Gm26682 ENSMUSG00000097888 61 0.899 - - 0.899 - - - predicted gene, 26682 [Source:MGI Symbol;Acc:MGI:5477176]
41. Adck2 ENSMUSG00000046947 310 0.899 - - 0.899 - - - aarF domain containing kinase 2 [Source:MGI Symbol;Acc:MGI:1889336]
42. Ghdc ENSMUSG00000017747 136 0.898 - - 0.898 - - - GH3 domain containing [Source:MGI Symbol;Acc:MGI:1931556]
43. Rbm46 ENSMUSG00000033882 99 0.898 - - 0.898 - - - RNA binding motif protein 46 [Source:MGI Symbol;Acc:MGI:3645057]
44. 4930523C07Rik ENSMUSG00000090394 21 0.898 - - - - - 0.898 RIKEN cDNA 4930523C07 gene [Source:MGI Symbol;Acc:MGI:1914897]
45. Thbs2 ENSMUSG00000023885 150 0.896 - - 0.896 - - - thrombospondin 2 [Source:MGI Symbol;Acc:MGI:98738]
46. Tyrobp ENSMUSG00000030579 161 0.895 - - 0.895 - - - TYRO protein tyrosine kinase binding protein [Source:MGI Symbol;Acc:MGI:1277211]
47. A630001G21Rik ENSMUSG00000052760 86 0.894 - - 0.894 - - - RIKEN cDNA A630001G21 gene [Source:MGI Symbol;Acc:MGI:2443131]
48. Snx25 ENSMUSG00000038291 212 0.893 - - 0.893 - - - sorting nexin 25 [Source:MGI Symbol;Acc:MGI:2142610]
49. Gm14138 ENSMUSG00000081572 36 0.891 - - - - - 0.891 predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
50. Gimap1 ENSMUSG00000090019 99 0.89 - - 0.890 - - - GTPase, IMAP family member 1 [Source:MGI Symbol;Acc:MGI:109368]
51. Gm21846 ENSMUSG00000094832 50 0.889 - - - - - 0.889 predicted gene, 21846 [Source:MGI Symbol;Acc:MGI:5434010]
52. Gm24265 ENSMUSG00000096243 20 0.888 - - - - - 0.888 predicted gene, 24265 [Source:MGI Symbol;Acc:MGI:5454042]
53. Gm8112 ENSMUSG00000112001 9 0.888 - - - - - 0.888 predicted gene 8112 [Source:MGI Symbol;Acc:MGI:3645531]
54. Gm26522 ENSMUSG00000097423 10 0.888 - - - - - 0.888 predicted gene, 26522 [Source:MGI Symbol;Acc:MGI:5477016]
55. Gm23722 ENSMUSG00000064936 14 0.888 - - - - - 0.888 predicted gene, 23722 [Source:MGI Symbol;Acc:MGI:5453499]
56. Gm26640 ENSMUSG00000097569 6 0.888 - - - - - 0.888 predicted gene, 26640 [Source:MGI Symbol;Acc:MGI:5477134]
57. Bin3 ENSMUSG00000022089 317 0.885 - - 0.885 - - - bridging integrator 3 [Source:MGI Symbol;Acc:MGI:1929883]
58. Erap1 ENSMUSG00000021583 70 0.885 - - 0.885 - - - endoplasmic reticulum aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1933403]
59. Mar-02_1 Mar-02_1 445 0.883 - - 0.883 - - -
60. Gm24056 ENSMUSG00000089242 346 0.882 - - 0.882 - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
61. Vmn1r184 ENSMUSG00000046130 6 0.881 - - - - - 0.881 vomeronasal 1 receptor, 184 [Source:MGI Symbol;Acc:MGI:3852451]
62. Egfl6 ENSMUSG00000000402 137 0.879 - - 0.879 - - - EGF-like-domain, multiple 6 [Source:MGI Symbol;Acc:MGI:1858599]
63. Ankrd23 ENSMUSG00000067653 22 0.877 - - - - - 0.877 ankyrin repeat domain 23 [Source:MGI Symbol;Acc:MGI:1925571]
64. Gm2445 ENSMUSG00000098113 16 0.876 - - - - - 0.876 predicted gene 2445 [Source:MGI Symbol;Acc:MGI:3780612]
65. Gpam ENSMUSG00000024978 18 0.875 - - - - - 0.875 glycerol-3-phosphate acyltransferase, mitochondrial [Source:MGI Symbol;Acc:MGI:109162]
66. Dpagt1 ENSMUSG00000032123 1234 0.874 - - 0.874 - - - dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) [Source:MGI Symbol;Acc:MGI:1196396]
67. Gm9990 Gm9990 256 0.873 - - 0.873 - - -
68. Zc2hc1c ENSMUSG00000045064 16 0.872 - - - - - 0.872 zinc finger, C2HC-type containing 1C [Source:MGI Symbol;Acc:MGI:1919600]
69. Carf ENSMUSG00000026017 38 0.872 - - - - - 0.872 calcium response factor [Source:MGI Symbol;Acc:MGI:2182269]
70. Oasl2 ENSMUSG00000029561 47 0.872 - - - - - 0.872 2'-5' oligoadenylate synthetase-like 2 [Source:MGI Symbol;Acc:MGI:1344390]
71. Parp14 ENSMUSG00000034422 21 0.871 - - - - - 0.871 poly (ADP-ribose) polymerase family, member 14 [Source:MGI Symbol;Acc:MGI:1919489]
72. Zfr2 ENSMUSG00000034949 144 0.869 - - 0.869 - - - zinc finger RNA binding protein 2 [Source:MGI Symbol;Acc:MGI:2143792]
73. Slc15a3 ENSMUSG00000024737 25 0.867 - - - - - 0.867 solute carrier family 15, member 3 [Source:MGI Symbol;Acc:MGI:1929691]
74. Ak5 ENSMUSG00000039058 89 0.866 - - 0.866 - - - adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
75. 1300002E11Rik ENSMUSG00000097290 149 0.866 - - 0.866 - - - RIKEN cDNA 1300002E11 gene [Source:MGI Symbol;Acc:MGI:1919001]
76. AI462493 AI462493 1120 0.865 - - 0.865 - - -
77. Chst1 ENSMUSG00000027221 323 0.865 - - 0.865 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1924219]
78. Gm16279 ENSMUSG00000084998 119 0.864 - - - - - 0.864 predicted gene 16279 [Source:MGI Symbol;Acc:MGI:3826576]
79. Trim65 ENSMUSG00000054517 56 0.863 - - - - - 0.863 tripartite motif-containing 65 [Source:MGI Symbol;Acc:MGI:2442815]
80. Retsat ENSMUSG00000056666 118 0.862 - - 0.862 - - - retinol saturase (all trans retinol 13,14 reductase) [Source:MGI Symbol;Acc:MGI:1914692]
81. Sbsn ENSMUSG00000046056 209 0.859 - - 0.859 - - - suprabasin [Source:MGI Symbol;Acc:MGI:2446326]
82. Agtr1a ENSMUSG00000049115 80 0.858 - - - - - 0.858 angiotensin II receptor, type 1a [Source:MGI Symbol;Acc:MGI:87964]
83. B230307C23Rik ENSMUSG00000080717 231 0.857 - - - - - 0.857 RIKEN cDNA B230307C23 gene [Source:MGI Symbol;Acc:MGI:3643396]
84. Mettl20 233 0.856 - - 0.856 - - - methyltransferase like 20, transcript variant X1
85. BC049762 ENSMUSG00000045942 41 0.855 - - 0.855 - - - cDNA sequence BC049762 [Source:MGI Symbol;Acc:MGI:3039622]
86. Gm1815 Gm1815 49 0.855 - - - - - 0.855
87. Fam167b ENSMUSG00000050493 68 0.855 - - 0.855 - - - family with sequence similarity 167, member B [Source:MGI Symbol;Acc:MGI:2668032]
88. Hopx ENSMUSG00000059325 75 0.854 - - - - - 0.854 HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
89. Abcc9 ENSMUSG00000030249 487 0.85 - - 0.850 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:MGI Symbol;Acc:MGI:1352630]
90. Fmo1 ENSMUSG00000040181 39 0.849 - - - - - 0.849 flavin containing monooxygenase 1 [Source:MGI Symbol;Acc:MGI:1310002]
91. Wdr24 ENSMUSG00000025737 577 0.849 - - 0.849 - - - WD repeat domain 24 [Source:MGI Symbol;Acc:MGI:2446285]
92. Ccdc39 ENSMUSG00000027676 104 0.848 - - - - - 0.848 coiled-coil domain containing 39 [Source:MGI Symbol;Acc:MGI:1289263]
93. Tgfb1 ENSMUSG00000002603 103 0.848 - - 0.848 - - - transforming growth factor, beta 1 [Source:MGI Symbol;Acc:MGI:98725]
94. Ap5m1 ENSMUSG00000036291 380 0.847 - - 0.847 - - - adaptor-related protein complex 5, mu 1 subunit [Source:MGI Symbol;Acc:MGI:1921635]
95. Fsip1 ENSMUSG00000027344 114 0.847 - - - - - 0.847 fibrous sheath-interacting protein 1 [Source:MGI Symbol;Acc:MGI:1918563]
96. Parp3 ENSMUSG00000023249 110 0.846 - - - - - 0.846 poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
97. Dbndd1 ENSMUSG00000031970 176 0.844 - - 0.844 - - - dysbindin (dystrobrevin binding protein 1) domain containing 1 [Source:MGI Symbol;Acc:MGI:1919435]
98. Rnft1 ENSMUSG00000020521 340 0.844 - - 0.844 - - - ring finger protein, transmembrane 1 [Source:MGI Symbol;Acc:MGI:1924142]
99. Spaca1 ENSMUSG00000028264 41 0.843 - - - - - 0.843 sperm acrosome associated 1 [Source:MGI Symbol;Acc:MGI:1914902]
100. Slc52a2 ENSMUSG00000022560 369 0.843 - - 0.843 - - - solute carrier protein 52, member 2 [Source:MGI Symbol;Acc:MGI:1289288]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA