Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scaf8

Gene Name Gene ID Reads Annotation
Scaf8 ENSMUSG00000046201 2219 SR-related CTD-associated factor 8 [Source:MGI Symbol;Acc:MGI:1925212]







Genes with expression patterns similar to Scaf8

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scaf8 ENSMUSG00000046201 2219 6 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD-associated factor 8 [Source:MGI Symbol;Acc:MGI:1925212]
2. Tmem259 ENSMUSG00000013858 819 0.876 - - - - - 0.876 transmembrane protein 259 [Source:MGI Symbol;Acc:MGI:2177957]
3. Gpsm1 ENSMUSG00000026930 656 0.855 - - - - - 0.855 G-protein signalling modulator 1 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1915089]
4. Ankrd16 ENSMUSG00000047909 1130 0.852 - - - - - 0.852 ankyrin repeat domain 16 [Source:MGI Symbol;Acc:MGI:2444796]
5. Plekha6 ENSMUSG00000041757 451 0.845 - - - - - 0.845 pleckstrin homology domain containing, family A member 6 [Source:MGI Symbol;Acc:MGI:2388662]
6. Znhit2 ENSMUSG00000075227 611 0.843 - - - - - 0.843 zinc finger, HIT domain containing 2 [Source:MGI Symbol;Acc:MGI:1352481]
7. Arl13b ENSMUSG00000022911 824 0.842 - - - - - 0.842 ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
8. Naa25 ENSMUSG00000042719 945 0.836 - - - - - 0.836 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:MGI Symbol;Acc:MGI:2442563]
9. Abracl ENSMUSG00000078453 2116 0.828 - - - - - 0.828 ABRA C-terminal like [Source:MGI Symbol;Acc:MGI:1920362]
10. Gm10040 ENSMUSG00000058360 476 0.824 - - - - - 0.824 predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
11. Rad51ap1 ENSMUSG00000030346 1698 0.813 - - - - - 0.813 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
12. Prrc2c ENSMUSG00000040225 9713 0.811 - - - - - 0.811 proline-rich coiled-coil 2C [Source:MGI Symbol;Acc:MGI:1913754]
13. Gltpd1 Gltpd1 398 0.811 - - - - - 0.811
14. Leprot ENSMUSG00000035212 3389 0.81 - - - - - 0.810 leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
15. Smc5 ENSMUSG00000024943 3041 0.804 - - - - - 0.804 structural maintenance of chromosomes 5 [Source:MGI Symbol;Acc:MGI:2385088]
16. Txnl4a ENSMUSG00000057130 1998 0.804 - - - - - 0.804 thioredoxin-like 4A [Source:MGI Symbol;Acc:MGI:1351613]
17. Pdp2 ENSMUSG00000048371 637 0.802 - - - - - 0.802 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
18. Gtf3c6 ENSMUSG00000019837 2716 0.802 - - - - - 0.802 general transcription factor IIIC, polypeptide 6, alpha [Source:MGI Symbol;Acc:MGI:1914621]
19. Pcmt1 ENSMUSG00000019795, ENSMUSG00000116405 2517 0.799 - - - - - 0.799 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:97502]
20. Hddc3 ENSMUSG00000030532 213 0.799 - - - - - 0.799 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
21. D17H6S56E-5 1432 0.798 - - - - - 0.798 DNA segment, Chr 17, human D6S56E 5, transcript variant X2
22. Slc7a6 ENSMUSG00000031904 1103 0.797 - - - - - 0.797 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
23. Mettl10 906 0.797 - - - - - 0.797 methyltransferase like 10, transcript variant X5
24. Lgr5 ENSMUSG00000020140 516 0.795 - - - - - 0.795 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
25. Exosc10 ENSMUSG00000017264 1407 0.794 - - - - - 0.794 exosome component 10 [Source:MGI Symbol;Acc:MGI:1355322]
26. Fam175b 1520 0.794 - - - - - 0.794 family with sequence similarity 175, member B
27. Rnaseh2a ENSMUSG00000052926 1911 0.793 - - - - - 0.793 ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
28. Zfyve19 ENSMUSG00000068580 337 0.789 - - - - - 0.789 zinc finger, FYVE domain containing 19 [Source:MGI Symbol;Acc:MGI:1919258]
29. Zbtb6 ENSMUSG00000066798 698 0.788 - - - - - 0.788 zinc finger and BTB domain containing 6 [Source:MGI Symbol;Acc:MGI:2442998]
30. Alkbh8 ENSMUSG00000025899 1212 0.788 - - - - - 0.788 alkB homolog 8, tRNA methyltransferase [Source:MGI Symbol;Acc:MGI:1914917]
31. Flnb ENSMUSG00000025278 1102 0.786 - - - - - 0.786 filamin, beta [Source:MGI Symbol;Acc:MGI:2446089]
32. Stbd1 ENSMUSG00000047963 377 0.786 - - - - - 0.786 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
33. Coq3 ENSMUSG00000028247 463 0.785 - - - - - 0.785 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
34. Ftx ENSMUSG00000086370 285 0.784 - - - - - 0.784 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
35. Itfg1 ENSMUSG00000031703 2324 0.784 - - - - - 0.784 integrin alpha FG-GAP repeat containing 1 [Source:MGI Symbol;Acc:MGI:106419]
36. Mpp1 ENSMUSG00000031402 1112 0.783 - - - - - 0.783 membrane protein, palmitoylated [Source:MGI Symbol;Acc:MGI:105941]
37. Gm14286 ENSMUSG00000087445 166 0.782 - - - - - 0.782 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
38. Cish ENSMUSG00000032578 239 0.782 - - - - - 0.782 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
39. Hes3 ENSMUSG00000028946 73 0.781 - - - - - 0.781 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
40. Gm24451 ENSMUSG00000065287 57 0.781 - - - - - 0.781 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
41. Phf19 ENSMUSG00000026873 83 0.78 - - - - - 0.780 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
42. Ndufc1 ENSMUSG00000037152 5070 0.78 - - - - - 0.780 NADH:ubiquinone oxidoreductase subunit C1 [Source:MGI Symbol;Acc:MGI:1913627]
43. Araf ENSMUSG00000001127 2162 0.78 - - - - - 0.780 Araf proto-oncogene, serine/threonine kinase [Source:MGI Symbol;Acc:MGI:88065]
44. Gm10307 ENSMUSG00000101093 159 0.78 - - - - - 0.780 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
45. Sh3rf2 ENSMUSG00000057719 60 0.78 - - - - - 0.780 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
46. Aspscr1 ENSMUSG00000025142 694 0.779 - - - - - 0.779 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
47. 2310036O22Rik 7503 0.779 - - - - - 0.779 RIKEN cDNA 2310036O22 gene, transcript variant X1
48. Paxbp1 ENSMUSG00000022974 322 0.778 - - - - - 0.778 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
49. Ndufb11 ENSMUSG00000031059 4781 0.778 - - - - - 0.778 NADH:ubiquinone oxidoreductase subunit B11 [Source:MGI Symbol;Acc:MGI:1349919]
50. Gm13910 ENSMUSG00000063684 126 0.777 - - - - - 0.777 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
51. 9130023H24Rik ENSMUSG00000062944 258 0.777 - - - - - 0.777 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
52. Socs6 ENSMUSG00000056153 4730 0.777 - - - - - 0.777 suppressor of cytokine signaling 6 [Source:MGI Symbol;Acc:MGI:1924885]
53. Il17d ENSMUSG00000050222 119 0.776 - - - - - 0.776 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
54. Fancl ENSMUSG00000004018 569 0.776 - - - - - 0.776 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
55. Bcr ENSMUSG00000009681 588 0.776 - - - - - 0.776 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
56. Fam131a ENSMUSG00000050821 113 0.776 - - - - - 0.776 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
57. Chst10 ENSMUSG00000026080 667 0.775 - - - - - 0.775 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
58. Rufy2 ENSMUSG00000020070 1150 0.775 - - - - - 0.775 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
59. Prkaa1 ENSMUSG00000050697 591 0.775 - - - - - 0.775 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
60. Tm2d1 ENSMUSG00000028563 1315 0.773 - - - - - 0.773 TM2 domain containing 1 [Source:MGI Symbol;Acc:MGI:2137022]
61. Ctsc ENSMUSG00000030560 650 0.772 - - - - - 0.772 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
62. Ufsp1 ENSMUSG00000051502 251 0.772 - - - - - 0.772 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
63. Htr1b ENSMUSG00000049511 77 0.771 - - - - - 0.771 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
64. Map4k2 ENSMUSG00000024948, ENSMUSG00000106850 1019 0.771 - - - - - 0.771 mitogen-activated protein kinase kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346883]
65. Ostm1 ENSMUSG00000038280 208 0.771 - - - - - 0.771 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
66. Gpr108 ENSMUSG00000005823 539 0.77 - - - - - 0.770 G protein-coupled receptor 108 [Source:MGI Symbol;Acc:MGI:1925558]
67. Usp45 ENSMUSG00000040455 1493 0.768 - - - - - 0.768 ubiquitin specific petidase 45 [Source:MGI Symbol;Acc:MGI:101850]
68. Zzef1 ENSMUSG00000055670 953 0.768 - - - - - 0.768 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
69. Crcp ENSMUSG00000025532 699 0.768 - - - - - 0.768 calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
70. Cpt2 ENSMUSG00000028607 826 0.768 - - - - - 0.768 carnitine palmitoyltransferase 2 [Source:MGI Symbol;Acc:MGI:109176]
71. Gm13476 Gm13476 165 0.767 - - - - - 0.767
72. Mbd1 ENSMUSG00000024561 619 0.766 - - - - - 0.766 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
73. Zfp236 ENSMUSG00000041258 968 0.765 - - - - - 0.765 zinc finger protein 236 [Source:MGI Symbol;Acc:MGI:1926950]
74. Pfkfb2 ENSMUSG00000026409 480 0.765 - - - - - 0.765 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
75. Gtf2f2 ENSMUSG00000067995 1487 0.765 - - - - - 0.765 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
76. Acsl6 ENSMUSG00000020333 249 0.764 - - - - - 0.764 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
77. Atp8a1 ENSMUSG00000037685 1155 0.763 - - - - - 0.763 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
78. Ppt2 ENSMUSG00000015474 321 0.763 - - - - - 0.763 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
79. Hbb-bs ENSMUSG00000052305 2551 0.763 - - - - - 0.763 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
80. Alkbh4 ENSMUSG00000039754 367 0.763 - - - - - 0.763 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
81. Dusp2 ENSMUSG00000027368 534 0.762 - - - - - 0.762 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
82. Dtd1 ENSMUSG00000027430 447 0.761 - - - - - 0.761 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
83. Taz ENSMUSG00000009995 1408 0.761 - - - - - 0.761 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
84. 2310015A10Rik ENSMUSG00000097729 199 0.76 - - - - - 0.760 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
85. Amd1 ENSMUSG00000075232 1041 0.76 - - - - - 0.760 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
86. Topors ENSMUSG00000036822 2671 0.76 - - - - - 0.760 topoisomerase I binding, arginine/serine-rich [Source:MGI Symbol;Acc:MGI:2146189]
87. Mrps17 ENSMUSG00000034211 2392 0.76 - - - - - 0.760 mitochondrial ribosomal protein S17 [Source:MGI Symbol;Acc:MGI:1913508]
88. Cdc16 ENSMUSG00000038416 7042 0.76 - - - - - 0.760 CDC16 cell division cycle 16 [Source:MGI Symbol;Acc:MGI:1917207]
89. Smpd4 ENSMUSG00000005899 2969 0.759 - - - - - 0.759 sphingomyelin phosphodiesterase 4 [Source:MGI Symbol;Acc:MGI:1924876]
90. Acp2 ENSMUSG00000002103 1293 0.758 - - - - - 0.758 acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
91. Gm15545 ENSMUSG00000087138 252 0.758 - - - - - 0.758 predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
92. Lhpp ENSMUSG00000030946 365 0.758 - - - - - 0.758 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
93. Dfna5 492 0.758 - - - - - 0.758 deafness, autosomal dominant 5 (human), transcript variant X3
94. Wipi1 ENSMUSG00000041895 3789 0.757 - - - - - 0.757 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
95. Sh3pxd2b ENSMUSG00000040711 2383 0.754 - - - - - 0.754 SH3 and PX domains 2B [Source:MGI Symbol;Acc:MGI:2442062]
96. Trdmt1 ENSMUSG00000026723 391 0.753 - - - - - 0.753 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
97. Spred1 ENSMUSG00000027351 2590 0.752 - - - - - 0.752 sprouty protein with EVH-1 domain 1, related sequence [Source:MGI Symbol;Acc:MGI:2150016]
98. Asb13 ENSMUSG00000033781 402 0.752 - - - - - 0.752 ankyrin repeat and SOCS box-containing 13 [Source:MGI Symbol;Acc:MGI:2145525]
99. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.752 - - - - - 0.752 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
100. Blmh ENSMUSG00000020840 2762 0.751 - - - - - 0.751 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA