Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYT4

Gene Name Gene ID Reads Annotation
SYT4 ENSGALG00000042626 384 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]











Genes with expression patterns similar to SYT4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYT4 ENSGALG00000042626 384 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
2. GAP43 ENSGALG00000015089 505 3.175 - - 0.776 - 0.787 - - - 0.899 0.713 growth associated protein 43 [Source:NCBI gene;Acc:427955]
3. EF1A EF1A 2378 2.526 - - 0.822 - - - - - 0.936 0.768
4. ISL1 ENSGALG00000014884 7666 2.503 - - 0.802 - - - - - 0.869 0.832 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
5. RTN1 ENSGALG00000012006 2438 2.49 - - 0.722 - - - - - 0.918 0.850 reticulon 1 [Source:NCBI gene;Acc:378791]
6. SIAT8C SIAT8C 178 2.471 - - 0.816 - - - - - 0.907 0.748
7. MYT1 ENSGALG00000005932 2017 2.414 - - 0.786 - - - - - 0.841 0.787 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
8. MAP2 ENSGALG00000002789 6597 2.339 - - - - - 0.720 - - 0.804 0.815 microtubule associated protein 2, transcript variant X33
9. SCML4 ENSGALG00000015309 499 2.338 - - 0.757 - - - - - 0.864 0.717 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
10. NSG1 ENSGALG00000015010 5829 2.317 - - - - - 0.726 - - 0.852 0.739 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
11. NHLH1 ENSGALG00000025817 1617 2.301 - - 0.781 - - - - - 0.727 0.793 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
12. NKX-6.2 NKX-6.2 1370 2.29 - - 0.721 - 0.820 - - - 0.749 -
13. STMN2 ENSGALG00000039690 989 2.289 - - 0.773 - - - - - 0.763 0.753 stathmin 2 [Source:NCBI gene;Acc:396095]
14. PLPPR1 ENSGALG00000015542 3179 2.271 - - - - - 0.735 - - 0.703 0.833 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
15. FABP7 ENSGALG00000038933 6780 2.268 - - - - - 0.711 - - 0.730 0.827 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
16. EFCAB6 ENSGALG00000014188 139 2.263 - - 0.772 - - - - - 0.779 0.712 EF-hand calcium binding domain 6, transcript variant X3
17. NFASC ENSGALG00000031776 4264 1.716 - - - - - - - - 0.912 0.804 neurofascin [Source:NCBI gene;Acc:419824]
18. GPM6A ENSGALG00000043480 2133 1.714 - - - - - - - - 0.850 0.864 glycoprotein M6A [Source:NCBI gene;Acc:422569]
19. CDH12 ENSGALG00000012941 223 1.69 - - - - 0.872 - - - - 0.818 cadherin 12, transcript variant X8
20. NEFL ENSGALG00000000314 4883 1.658 - - - - - - - - 0.884 0.774 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
21. UCH-L1 UCH-L1 12697 1.654 - - - - - - - - 0.883 0.771
22. STMN1 ENSGALG00000001475 225354 1.628 - - - - - - - - 0.803 0.825 stathmin 1 [Source:NCBI gene;Acc:396057]
23. ASTN1 ENSGALG00000004472 855 1.617 - - - - - - - - 0.804 0.813 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
24. TBC1D30 ENSGALG00000009859 994 1.585 - - - - - - - - 0.803 0.782 TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
25. TUBB2B ENSGALG00000012821 41535 1.582 - - - - - - - - 0.846 0.736 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
26. MNR2 ENSGALG00000011349 3340 1.572 - - - - 0.707 - - - 0.865 - homeodomain protein
27. NTM ENSGALG00000001437 584 1.568 - - - - - - - - 0.809 0.759 neurotrimin [Source:NCBI gene;Acc:395450]
28. DPYSL4 ENSGALG00000010490 3431 1.563 - - - - - - - - 0.850 0.713 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
29. PCDH8 ENSGALG00000036258 1945 1.551 - - - - - 0.816 - - - 0.735 protocadherin 8 [Source:NCBI gene;Acc:428065]
30. GNG2 ENSGALG00000027629 9404 1.541 - - - - - - - - 0.811 0.730 G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
31. TAGLN3 ENSGALG00000015379 7865 1.538 - - - - - - - - 0.710 0.828 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
32. CRMP1B CRMP1B 18633 1.537 - - - - - - - - 0.752 0.785
33. NEFM ENSGALG00000000317 6992 1.53 - - - - 0.743 - - - - 0.787 neurofilament medium [Source:NCBI gene;Acc:396206]
34. ELAVL4 ENSGALG00000010533 4978 1.528 - - - - - - - - 0.739 0.789 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
35. GABRA3 ENSGALG00000007269 985 1.525 - - - - - 0.706 - - 0.819 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
36. BAI1 BAI1 235 1.523 - - - - - - - - 0.775 0.748
37. SHISA3 ENSGALG00000026042 1108 1.512 - - 0.757 - 0.755 - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
38. MARCKSL1 ENSGALG00000032335 88728 1.497 - - - - - - - - 0.753 0.744 MARCKS like 1 [Source:NCBI gene;Acc:770764]
39. SNAP25 ENSGALG00000009003 222 1.489 - - - - - - - - 0.768 0.721 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
40. TMSB10 TMSB10 518 1.473 - - 0.726 - - - - - - 0.747
41. SEZ6L ENSGALG00000032415 56 1.461 - - - - - - - - 0.734 0.727 seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
42. SCG3 ENSGALG00000043583 1247 1.461 - - - - - - - - 0.701 0.760 secretogranin III [Source:NCBI gene;Acc:415424]
43. CNTN2 ENSGALG00000000653 219 1.456 - - 0.704 - - - - - - 0.752 contactin 2 [Source:NCBI gene;Acc:419825]
44. MYT1L ENSGALG00000016384 147 1.438 - - - - - 0.734 - - - 0.704 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
45. FAM83B ENSGALG00000016299 17 1 - - - - - - - 1.000 - - family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
46. PACRGL ENSGALG00000014406 18 0.997 - - - - - - - 0.997 - - parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
47. ZNF511 ENSGALG00000003533 234 0.997 - - - - - - - 0.997 - - zinc finger protein 511 [Source:HGNC Symbol;Acc:HGNC:28445]
48. OBSCN ENSGALG00000032534 20 0.997 - - - - - - - 0.997 - - obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF [Source:HGNC Symbol;Acc:HGNC:15719]
49. ENSGALG00000024266 ENSGALG00000024266 5 0.997 - - - - - - - 0.997 - -
50. KCNA4 ENSGALG00000012142 6 0.988 - - - - - - - 0.988 - - potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
51. ENSGALG00000018479 ENSGALG00000018479 10 0.988 - - - - - - - 0.988 - -
52. ENSGALG00000023094 ENSGALG00000023094 15 0.988 - - - - - - - 0.988 - -
53. AIG1 ENSGALG00000013780 27 0.988 - - - - - - - 0.988 - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
54. GPR65 ENSGALG00000010595 2 0.988 - - - - - - - 0.988 - - G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
55. SOWAHC ENSGALG00000026360 23 0.988 - - - - - - - 0.988 - - sosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]
56. ZC2HC1A ENSGALG00000035932 17 0.988 - - - - - - - 0.988 - - zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
57. PGA PGA 1 0.988 - - - - - - - 0.988 - -
58. FMO4 ENSGALG00000040292 1 0.988 - - - - - - - 0.988 - - flavin containing monooxygenase 4 [Source:HGNC Symbol;Acc:HGNC:3772]
59. NEK8 ENSGALG00000003979 4 0.988 - - - - - - - 0.988 - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
60. CHRND ENSGALG00000007899 55 0.988 - - - - - - - 0.988 - - cholinergic receptor nicotinic delta subunit [Source:NCBI gene;Acc:424940]
61. COL19A1 ENSGALG00000043584 38 0.988 - - - - - - - 0.988 - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
62. LRCH3 ENSGALG00000007595 21 0.988 - - - - - - - 0.988 - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
63. GRK5 ENSGALG00000009403 45 0.977 - - - - - - - 0.977 - - G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]
64. MAPK1 ENSGALG00000001501 34 0.975 - - - - - - - 0.975 - - mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
65. SIRT5 ENSGALG00000012692 3196 0.968 - - - - - - - 0.968 - - sirtuin 5 [Source:NCBI gene;Acc:420834]
66. LONRF3 ENSGALG00000008860 55 0.968 - - - - - - - 0.968 - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
67. AGBL5 ENSGALG00000038639 25 0.955 - - - - - - - 0.955 - - ATP/GTP binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:26147]
68. KCNJ11 ENSGALG00000020505 196 0.938 - - - - - - - 0.938 - - potassium voltage-gated channel subfamily J member 11 [Source:HGNC Symbol;Acc:HGNC:6257]
69. CCDC14 ENSGALG00000044814 65 0.936 - - - - - - - 0.936 - - coiled-coil domain containing 14 [Source:HGNC Symbol;Acc:HGNC:25766]
70. NYAP2 ENSGALG00000004966 24 0.936 - - - - - - - 0.936 - - neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]
71. DCLK3 ENSGALG00000034493 50 0.935 - - - - - - - 0.935 - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
72. HMGCS1 ENSGALG00000014862 2846 0.932 - - - - - - - - 0.932 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
73. RUSC2 ENSGALG00000002371 272 0.923 - - - - - - - - 0.923 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
74. PTPRS ENSGALG00000004048 70 0.915 - - - - - - - 0.915 - - protein tyrosine phosphatase, receptor type S [Source:NCBI gene;Acc:396375]
75. IMPG2 ENSGALG00000015322 74 0.914 - - - - - - - 0.914 - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
76. TMEM8B ENSGALG00000002386 32 0.91 - - - - - - - 0.910 - - transmembrane protein 8B [Source:HGNC Symbol;Acc:HGNC:21427]
77. SLC5A7 ENSGALG00000016804 93 0.889 - - - - - - - - 0.889 - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
78. PEX7 ENSGALG00000013874 34 0.887 - - - - - - - 0.887 - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
79. CHAMP1 ENSGALG00000016813 508 0.883 - - - - - - - 0.883 - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
80. EPG5 ENSGALG00000036259 71 0.869 - - - - - - - 0.869 - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
81. PTPN3 ENSGALG00000022909 6 0.869 - - - - - - - 0.869 - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
82. LRRN2 ENSGALG00000000639 73 0.868 - - - - - - - - 0.868 - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
83. SPP2 ENSGALG00000004129 34 0.865 - - - - - - - 0.865 - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
84. GRIK1 ENSGALG00000015835 297 0.862 - - - - - - - 0.862 - - glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]
85. INA ENSGALG00000028238 208 0.861 - - - - - - - - 0.861 - internexin neuronal intermediate filament protein alpha
86. CLEC16A ENSGALG00000007167 66 0.861 - - - - - - - 0.861 - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
87. SYPL1 ENSGALG00000029006 126 0.858 - - - - - - - 0.858 - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
88. MORN5 ENSGALG00000044151 95 0.856 - - - - - - - 0.856 - - MORN repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:17841]
89. HTR7_1 ENSGALG00000040549 86 0.85 - - - - - - - 0.850 - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
90. HAPLN4 ENSGALG00000026563 9 0.839 - - - - - - - 0.839 - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
91. STMN3 ENSGALG00000006130 151 0.834 - - - - - - - - 0.834 - stathmin 3 [Source:NCBI gene;Acc:419263]
92. TMEM173 ENSGALG00000041129 93 0.833 - - - - - - - 0.833 - - transmembrane protein 173 [Source:NCBI gene;Acc:768990]
93. CLVS1 ENSGALG00000043172 56 0.833 - - - - 0.833 - - - - - clavesin 1
94. PLCH2 ENSGALG00000001207 7 0.828 - - - - - 0.828 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
95. MAK ENSGALG00000012770 32 0.828 - - - - - 0.828 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
96. GDI2 ENSGALG00000008169 67151 0.823 - - - - - - - - 0.823 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
97. ENSGALG00000003618 ENSGALG00000003618 12 0.823 - - - - - 0.823 - - - -
98. ELOVL4 ENSGALG00000015876 853 0.822 - - - - - - - - 0.822 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
99. ACTR10L ENSGALG00000012085 30 0.817 - - - - - - - 0.817 - - actin-related protein 10-like
100. EDIL3 ENSGALG00000015630 7 0.815 - - - - - 0.815 - - - - EGF like repeats and discoidin domains 3 [Source:HGNC Symbol;Acc:HGNC:3173]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA