Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYT1

Gene Name Gene ID Reads Annotation
SYT1 ENSGALG00000041094 74 synaptotagmin 1 [Source:NCBI gene;Acc:396083]











Genes with expression patterns similar to SYT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYT1 ENSGALG00000041094 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 synaptotagmin 1 [Source:NCBI gene;Acc:396083]
2. gga-mir-1600 ENSGALG00000025438 248 1.583 - - - - - 0.861 - - - 0.722 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
3. DNAH7 ENSGALG00000007841 32 1.533 - - - - - 0.823 - - - 0.710 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
4. CCDC112 ENSGALG00000045092 38 1.521 - - - - - 0.782 - - - 0.739 coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
5. KLHL14 ENSGALG00000036969 3 1 - - - - - 1.000 - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
6. ABLIM2 ENSGALG00000043448 48 0.95 - - - - - 0.950 - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
7. ARHGEF26 ENSGALG00000010352 3 0.95 - - - - - 0.950 - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
8. CETP ENSGALG00000001234 18 0.95 - - - - - 0.950 - - - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
9. GBF1 ENSGALG00000005637 32 0.95 - - - - - 0.950 - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
10. ENSGALG00000025872 ENSGALG00000025872 5 0.95 - - - - - 0.950 - - - -
11. ENSGALG00000012324 ENSGALG00000012324 4 0.95 - - - - - 0.950 - - - -
12. SPEF2 ENSGALG00000023552 23 0.95 - - - - - 0.950 - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
13. NME8 ENSGALG00000029677 2 0.95 - - - - - 0.950 - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
14. SREBP-1 SREBP-1 2 0.95 - - - - - 0.950 - - - -
15. ABHD3 ENSGALG00000014938 9 0.95 - - - - - 0.950 - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
16. SLN ENSGALG00000017168 3 0.95 - - - - - 0.950 - - - - sarcolipin [Source:NCBI gene;Acc:100857277]
17. BOK ENSGALG00000005772 117 0.95 - - - - - 0.950 - - - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
18. ENSGALG00000005511 ENSGALG00000005511 7 0.95 - - - - - 0.950 - - - -
19. AMY1A ENSGALG00000005147 3 0.95 - - - - - 0.950 - - - - amylase, alpha 1A; hepatic [Source:NCBI gene;Acc:414139]
20. TOPAZ1 18 0.95 - - - - - 0.950 - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
21. B3GALT2 ENSGALG00000002477 13 0.95 - - - - - 0.950 - - - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
22. SNORA75 SNORA75 41 0.95 - - - - - 0.950 - - - -
23. CD320 ENSGALG00000021688 3 0.95 - - - - - 0.950 - - - - CD320 molecule [Source:NCBI gene;Acc:420066]
24. LRIT2 ENSGALG00000002307 2 0.95 - - - - - 0.950 - - - - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
25. BCL2L14 ENSGALG00000011544 11 0.95 - - - - - 0.950 - - - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
26. CLDN20 ENSGALG00000027634 25 0.95 - - - - - 0.950 - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
27. ZNF362 ENSGALG00000026558 11 0.95 - - - - - 0.950 - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
28. RGR ENSGALG00000002299 17 0.95 - - - - - 0.950 - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
29. PLA2G1BL ENSGALG00000007236 4 0.95 - - - - - 0.950 - - - - phospholipase A2, major isoenzyme-like
30. MCMDC2 ENSGALG00000031863 3 0.95 - - - - - 0.950 - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
31. DUS4L ENSGALG00000023661 29 0.95 - - - - - 0.950 - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
32. AAGAB ENSGALG00000007887 142 0.948 - - - - - 0.948 - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
33. ENSGALG00000026913 ENSGALG00000026913 12 0.94 - - - - - 0.940 - - - -
34. PRC1 ENSGALG00000012836 20 0.934 - - - - - 0.934 - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
35. CD300A CD300A 173 0.932 - - - - - 0.932 - - - -
36. SEPP1 SEPP1 35 0.928 - - - - - 0.928 - - - -
37. LXN ENSGALG00000009651 128 0.928 - - - - - 0.928 - - - - latexin [Source:NCBI gene;Acc:771519]
38. ZNF777 ENSGALG00000038657 3 0.925 - - - - - 0.925 - - - - zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
39. ENSGALG00000000346 ENSGALG00000000346 130 0.922 - - - - - 0.922 - - - -
40. KIAA0040 ENSGALG00000030543 53 0.912 - - - - - 0.912 - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
41. WDFY4 ENSGALG00000006165 22 0.908 - - - - - 0.908 - - - - WDFY family member 4 [Source:HGNC Symbol;Acc:HGNC:29323]
42. KIAA0319L ENSGALG00000002445 75 0.906 - - - - - 0.906 - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
43. GNPDA1 ENSGALG00000040594 13 0.905 - - - - - 0.905 - - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
44. ENSGALG00000000099 ENSGALG00000000099 16 0.903 - - - - - 0.903 - - - -
45. ENSGALG00000023694 ENSGALG00000023694 45 0.898 - - - - - 0.898 - - - -
46. MTFMT ENSGALG00000007353 805 0.898 - - - - - 0.898 - - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
47. PROCR ENSGALG00000006547 645 0.893 - - - - - 0.893 - - - - protein C receptor [Source:NCBI gene;Acc:424867]
48. PARK2 166 0.891 - - - - - 0.891 - - - - parkin RBR E3 ubiquitin protein ligase
49. RBM41 ENSGALG00000004832 838 0.883 - - - - - 0.883 - - - - RNA binding motif protein 41 [Source:HGNC Symbol;Acc:HGNC:25617]
50. HIPK1 ENSGALG00000001939 26 0.881 - - - - - 0.881 - - - - homeodomain interacting protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:19006]
51. CCDC83 ENSGALG00000013247 61 0.876 - - - - - 0.876 - - - - coiled-coil domain containing 83 [Source:HGNC Symbol;Acc:HGNC:28535]
52. IGF2R ENSGALG00000011621 81 0.874 - - - - - 0.874 - - - - insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
53. RFX8 ENSGALG00000045388 17 0.872 - - - - - 0.872 - - - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
54. SLC6A6 ENSGALG00000006425 31 0.868 - - - - - 0.868 - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
55. PALM ENSGALG00000026055 8 0.867 - - - - - 0.867 - - - - paralemmin [Source:NCBI gene;Acc:101750199]
56. TOR1B TOR1B 197 0.867 - - - - - 0.867 - - - -
57. ATXN7L1 ENSGALG00000008115 84 0.865 - - - - - - - - - 0.865 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
58. HMOX1 ENSGALG00000012550 1186 0.861 - - - - - 0.861 - - - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
59. NUAK1 ENSGALG00000012662 411 0.86 - - - - - 0.860 - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
60. SOUL ENSGALG00000012464 52 0.859 - - - - - 0.859 - - - - SOUL protein [Source:NCBI gene;Acc:395567]
61. NOG2 ENSGALG00000039817 5 0.855 - - - - - 0.855 - - - - noggin 2 [Source:NCBI gene;Acc:427689]
62. ERBB2 ENSGALG00000031529 313 0.853 - - - - - 0.853 - - - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
63. RBM46 ENSGALG00000009278 98 0.849 - - - - - 0.849 - - - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
64. ADH6 ENSGALG00000020160 29 0.847 - - - - - 0.847 - - - - alcohol dehydrogenase 6 (class V) [Source:NCBI gene;Acc:395979]
65. XRCC4 ENSGALG00000015620 28 0.844 - - - - - - - - - 0.844 X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
66. IRF-3 IRF-3 129 0.837 - - - - - 0.837 - - - -
67. RGS9 ENSGALG00000029610 112 0.832 - - - - - 0.832 - - - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
68. NOS2 ENSGALG00000038096 7 0.831 - - - - - 0.831 - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
69. GUCY2C ENSGALG00000011838 16 0.831 - - - - - 0.831 - - - - guanylate cyclase 2C [Source:HGNC Symbol;Acc:HGNC:4688]
70. CBX2 ENSGALG00000023338 10 0.83 - - - - - 0.830 - - - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
71. C22orf39 ENSGALG00000044654 1364 0.829 - - - - - 0.829 - - - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
72. CNRIP1 ENSGALG00000008757 128 0.828 - - - - - 0.828 - - - - cannabinoid receptor interacting protein 1 [Source:NCBI gene;Acc:421266]
73. ENSGALG00000025733 ENSGALG00000025733 197 0.826 - - - - - 0.826 - - - -
74. CPE ENSGALG00000027788 153 0.825 - - - - - 0.825 - - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
75. NACC2 ENSGALG00000001728 91 0.822 - - - - - 0.822 - - - - NACC family member 2 [Source:NCBI gene;Acc:417128]
76. AGR3 ENSGALG00000019651 2 0.822 - - - - - 0.822 - - - - anterior gradient 3, protein disulphide isomerase family member [Source:NCBI gene;Acc:420597]
77. ATP2A3 ENSGALG00000001564 18 0.821 - - - - - 0.821 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:NCBI gene;Acc:395707]
78. gga-mir-6567 ENSGALG00000028837 210 0.82 - - - - - 0.820 - - - - gga-mir-6567 [Source:miRBase;Acc:MI0022384]
79. GFPT2 ENSGALG00000039705 562 0.812 - - - - - 0.812 - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
80. ENSGALG00000010101 ENSGALG00000010101 601 0.81 - - - - - 0.810 - - - -
81. DSG2 ENSGALG00000015142 67 0.802 - - - - - 0.802 - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
82. NECAB1 ENSGALG00000029509 202 0.799 - - - - - - - - - 0.799 N-terminal EF-hand calcium binding protein 1 [Source:NCBI gene;Acc:420219]
83. VPS72 ENSGALG00000000793 329 0.798 - - - - - 0.798 - - - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
84. ZAR1 ENSGALG00000035565 141 0.794 - - - - - - - - - 0.794 zygote arrest 1 [Source:HGNC Symbol;Acc:HGNC:20436]
85. TADA3 ENSGALG00000006688 27 0.79 - - - - - 0.790 - - - - transcriptional adaptor 3 [Source:HGNC Symbol;Acc:HGNC:19422]
86. GPCPD1 ENSGALG00000009130 24 0.788 - - - - - 0.788 - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
87. ENSGALG00000027487 ENSGALG00000027487 5 0.787 - - - - - 0.787 - - - -
88. SNORD72 SNORD72 107 0.786 - - - - - 0.786 - - - -
89. RUFY3 ENSGALG00000011564 15 0.784 - - - - - 0.784 - - - - RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
90. GJB1 ENSGALG00000005541 261 0.783 - - - - - 0.783 - - - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
91. MAB21L1 ENSGALG00000045052 1677 0.78 - - - - - 0.780 - - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
92. DRAM1 ENSGALG00000012761 53 0.78 - - - - - 0.780 - - - - DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
93. LNPEP ENSGALG00000015301 13 0.78 - - 0.780 - - - - - - - leucyl and cystinyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:6656]
94. JAK2 ENSGALG00000015027 73 0.78 - - - - - 0.780 - - - - Janus kinase 2 [Source:NCBI gene;Acc:374199]
95. MYH7 ENSGALG00000035594 188 0.779 - - - - - - - - - 0.779 myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
96. PPM1K ENSGALG00000011266 111 0.777 - - - - - 0.777 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1K [Source:HGNC Symbol;Acc:HGNC:25415]
97. CDK7 ENSGALG00000014790 148 0.774 - - - - - 0.774 - - - - cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]
98. SMIM5 ENSGALG00000002427 84 0.771 - - - - - 0.771 - - - - small integral membrane protein 5 [Source:NCBI gene;Acc:770371]
99. SPAG17 55 0.771 - - - - - - - - - 0.771 sperm associated antigen 17
100. ERCC6L2 ENSGALG00000012621 77 0.768 - - - - - 0.768 - - - - excision repair cross-complementation group 6 like 2, transcript variant X8

There are 84 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA