Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNPO2

Gene Name Gene ID Reads Annotation
SYNPO2 ENSGALG00000011994 34 synaptopodin 2 [Source:HGNC Symbol;Acc:HGNC:17732]











Genes with expression patterns similar to SYNPO2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNPO2 ENSGALG00000011994 34 5 - - 1.000 1.000 1.000 1.000 - - - 1.000 synaptopodin 2 [Source:HGNC Symbol;Acc:HGNC:17732]
2. TMEM161B ENSGALG00000010896 36 1.559 - - 0.772 - - - - - - 0.787 transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
3. MGAT3 ENSGALG00000036743 5 1.559 - - - 0.838 - 0.721 - - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
4. SLC7A10 ENSGALG00000004729 13 1.519 - - - 0.798 - 0.721 - - - - solute carrier family 7 member 10 [Source:HGNC Symbol;Acc:HGNC:11058]
5. EPHA1 ENSGALG00000014687 174 1.466 - - - - - 0.704 - - - 0.762 EPH receptor A1 [Source:NCBI gene;Acc:378782]
6. SLC25A29 ENSGALG00000011220 17 1.45 - - 0.749 - - - - - - 0.701 solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
7. PDE1C ENSGALG00000039935 16 1.435 - - 0.714 - - 0.721 - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
8. ZNF516 ENSGALG00000013660 34 1 - - - - 1.000 - - - - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
9. MOG ENSGALG00000022875 9 0.922 - - - - - - - - - 0.922 myelin oligodendrocyte glycoprotein, transcript variant X50
10. LOC418667 ENSGALG00000019147 4 0.9 - - - 0.900 - - - - - - granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
11. NIT2 ENSGALG00000015275 278 0.89 - - - - 0.890 - - - - - nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]
12. SH3PXD2B ENSGALG00000002831 7 0.879 - - - 0.879 - - - - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
13. ENSGALG00000011273 ENSGALG00000011273 9 0.879 - - - 0.879 - - - - - -
14. ENSGALG00000021824 ENSGALG00000021824 6 0.879 - - - 0.879 - - - - - -
15. LPGAT1 ENSGALG00000009848 33 0.879 - - - 0.879 - - - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
16. RHOJ ENSGALG00000011855 17 0.879 - - - 0.879 - - - - - - ras homolog family member J [Source:NCBI gene;Acc:423513]
17. TRHDE ENSGALG00000010200 4 0.879 - - - 0.879 - - - - - - thyrotropin releasing hormone degrading enzyme [Source:HGNC Symbol;Acc:HGNC:30748]
18. MRC2 ENSGALG00000000461 48 0.879 - - - 0.879 - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
19. IL10R1 IL10R1 9 0.879 - - - 0.879 - - - - - -
20. RNaseP RNaseP 30 0.879 - - - 0.879 - - - - - -
21. SOWAHA ENSGALG00000040802 2 0.879 - - - 0.879 - - - - - - sosondowah ankyrin repeat domain family member A [Source:HGNC Symbol;Acc:HGNC:27033]
22. CROCC 5 0.879 - - - 0.879 - - - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
23. RFX8 ENSGALG00000045388 17 0.859 - - - 0.859 - - - - - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
24. ADAMTS15 ENSGALG00000001407 11 0.855 - - 0.855 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
25. DNAH7 ENSGALG00000007841 32 0.851 - - - - 0.851 - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
26. AKAP6 ENSGALG00000009995 77 0.845 - - 0.845 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
27. HMGCLL1 ENSGALG00000016294 33 0.843 - - - - - - - - - 0.843 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
28. TM4SF19 ENSGALG00000006375 9 0.837 - - - - - - - - - 0.837 transmembrane 4 L six family member 19 [Source:NCBI gene;Acc:424855]
29. BLVRA ENSGALG00000031786 23 0.836 - - 0.836 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
30. LRRC43 LRRC43 16 0.83 - - 0.830 - - - - - - -
31. SLC6A11 ENSGALG00000004879 16 0.829 - - - 0.829 - - - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
32. TEKT3 ENSGALG00000001348 13 0.827 - - - - - 0.827 - - - - tektin 3 [Source:HGNC Symbol;Acc:HGNC:14293]
33. SH2D4B ENSGALG00000002370 10 0.824 - - - - - - - - - 0.824 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
34. SMAD9 ENSGALG00000017050 11 0.823 - - - 0.823 - - - - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
35. GPCPD1 ENSGALG00000009130 24 0.82 - - 0.820 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
36. ELF2 ENSGALG00000009774 83 0.818 - - 0.818 - - - - - - - E74 like ETS transcription factor 2, transcript variant X5
37. CCDC122 ENSGALG00000016968 5 0.817 - - - 0.817 - - - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
38. COL8A2 ENSGALG00000002298 27 0.814 - - - - - 0.814 - - - - collagen type VIII alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2216]
39. TTC29 ENSGALG00000010009 4 0.808 - - - - - - - - - 0.808 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
40. EXOC6B ENSGALG00000016098 3 0.808 - - - - - - - - - 0.808 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
41. CAMTA1 ENSGALG00000039525 1 0.808 - - - - - - - - - 0.808 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
42. RUFY4 2 0.808 - - - - - - - - - 0.808 RUN and FYVE domain containing 4, transcript variant X5
43. C8B ENSGALG00000010853 21 0.808 - - - - - - - - - 0.808 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
44. RS1 ENSGALG00000016523 11 0.808 - - - - - - - - - 0.808 retinoschisin 1 [Source:NCBI gene;Acc:772315]
45. ACOT1L ENSGALG00000008752 6 0.808 - - - - - - - - - 0.808 acyl-CoA thioesterase 1-like
46. ESR2 ENSGALG00000011801 7 0.808 - - - - - - - - - 0.808 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
47. TRIM36 ENSGALG00000008188 1 0.808 - - - - - - - - - 0.808 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
48. ENSGALG00000004619 ENSGALG00000004619 3 0.808 - - - - - - - - - 0.808
49. FOSL2 ENSGALG00000010036 3 0.808 - - - - - - - - - 0.808 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
50. ENSGALG00000024286 ENSGALG00000024286 2 0.808 - - - - - - - - - 0.808
51. C6orf58 ENSGALG00000045522 2 0.808 - - - - - - - - - 0.808 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
52. ENSGALG00000009487 ENSGALG00000009487 1 0.808 - - - - - - - - - 0.808
53. NUDT3 ENSGALG00000002830 7 0.808 - - - - - - - - - 0.808 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
54. SNORA77 SNORA77 5 0.808 - - - - - - - - - 0.808
55. MST MST 9 0.808 - - - - - - - - - 0.808
56. WNT7A ENSGALG00000005123 2 0.808 - - - - - - - - - 0.808 Wnt family member 7A [Source:NCBI gene;Acc:374168]
57. RAB9B ENSGALG00000004918 2 0.808 - - - - - - - - - 0.808 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
58. LRRN3 ENSGALG00000009488 1 0.808 - - - - - - - - - 0.808 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
59. DAPK1 ENSGALG00000012608 17 0.808 - - - - - - - - - 0.808 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
60. NT5E ENSGALG00000015833 5 0.808 - - - - - - - - - 0.808 5'-nucleotidase ecto
61. RBL2 ENSGALG00000003663 10 0.808 - - - - - - - - - 0.808 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
62. ENSGALG00000026496 ENSGALG00000026496 9 0.808 - - - - - - - - - 0.808
63. POLR3G ENSGALG00000014650 7 0.808 - - - - - - - - - 0.808 RNA polymerase III subunit G, transcript variant X2
64. IFN-GAMMA IFN-GAMMA 1 0.808 - - - - - - - - - 0.808
65. SNX13 ENSGALG00000010840 13 0.808 - - - - - - - - - 0.808 sorting nexin 13 [Source:NCBI gene;Acc:420598]
66. gga-mir-22 ENSGALG00000024507 2 0.808 - - - - - - - - - 0.808 gga-mir-22 [Source:miRBase;Acc:MI0006982]
67. GRAMD2 GRAMD2 3 0.808 - - - - - - - - - 0.808
68. PARP12 ENSGALG00000046187 10 0.805 - - - - - - - - - 0.805 poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
69. U12 U12 3 0.805 - - - - - - - - - 0.805
70. TRAF3IP3 ENSGALG00000001373 11 0.803 - - - 0.803 - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
71. NETO1 ENSGALG00000041184 3 0.803 - - - 0.803 - - - - - - neuropilin and tolloid like 1 [Source:HGNC Symbol;Acc:HGNC:13823]
72. KAL1 KAL1 48 0.802 - - 0.802 - - - - - - -
73. GBP1 ENSGALG00000000720 55 0.799 - - 0.799 - - - - - - - guanylate binding protein 1
74. CDH6 ENSGALG00000012917 17 0.794 - - - - - - - - - 0.794 cadherin 6 [Source:NCBI gene;Acc:414842]
75. THAP1 ENSGALG00000015385 15 0.794 - - - 0.794 - - - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
76. ZAR1 ENSGALG00000035565 141 0.792 - - 0.792 - - - - - - - zygote arrest 1 [Source:HGNC Symbol;Acc:HGNC:20436]
77. TBC1D2B ENSGALG00000003322 54 0.792 - - - - - - - - - 0.792 TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
78. VCAM1 ENSGALG00000005257 102 0.791 - - - 0.791 - - - - - - vascular cell adhesion molecule 1, transcript variant X1
79. HIAT1 HIAT1 447 0.788 - - - - - - - - - 0.788
80. SLITRK2 ENSGALG00000009192 51 0.781 - - 0.781 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
81. SNORA40 SNORA40 12 0.781 - - - - - - - - - 0.781
82. NMRAL1 ENSGALG00000029820 29 0.78 - - 0.780 - - - - - - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
83. TMEM14A ENSGALG00000019894 5279 0.78 - - - - - 0.780 - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
84. SLAMF8 ENSGALG00000027712 39 0.776 - - - 0.776 - - - - - - SLAM family member 8 [Source:NCBI gene;Acc:768588]
85. U11 U11 11 0.776 - - 0.776 - - - - - - -
86. NIPSNAP3L ENSGALG00000027334 7514 0.771 - - - - - 0.771 - - - - nipsnap homolog 3-like
87. LPP ENSGALG00000007337 18 0.77 - - - 0.770 - - - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
88. C7H2ORF69 ENSGALG00000008136 89 0.77 - - 0.770 - - - - - - - chromosome 7 open reading frame, human C2orf69 [Source:NCBI gene;Acc:424064]
89. ABCB11 ENSGALG00000010891 24 0.769 - - - 0.769 - - - - - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
90. NFXL1 ENSGALG00000014138 36 0.767 - - 0.767 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
91. KLF13 ENSGALG00000026590 13 0.766 - - - - - - - - - 0.766 Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
92. EZR ENSGALG00000013742 68 0.764 - - 0.764 - - - - - - - ezrin [Source:NCBI gene;Acc:395701]
93. SMYD3 ENSGALG00000010653 14 0.762 - - - - - - - - - 0.762 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
94. SMYD5 ENSGALG00000022920 12 0.761 - - - 0.761 - - - - - - SMYD family member 5 [Source:NCBI gene;Acc:422951]
95. PPP4R1 ENSGALG00000032092 1135 0.759 - - - - - 0.759 - - - - protein phosphatase 4 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:9320]
96. ENSGALG00000026461 ENSGALG00000026461 61 0.758 - - 0.758 - - - - - - -
97. EPHA10 ENSGALG00000001912 5 0.757 - - 0.757 - - - - - - - EPH receptor A10, transcript variant X1
98. SLC6A18 ENSGALG00000013180 6 0.757 - - 0.757 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
99. ENSGALG00000020389 ENSGALG00000020389 5 0.757 - - 0.757 - - - - - - -
100. SLC27A6 ENSGALG00000000184 98 0.756 - - - - - - - - - 0.756 solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA