Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNPO

Gene Name Gene ID Reads Annotation
SYNPO ENSGALG00000027330 5 synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]











Genes with expression patterns similar to SYNPO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNPO ENSGALG00000027330 5 3 - - 1.000 - - 1.000 - - - 1.000 synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
2. AIM1 51 1 - - - - - - - - - 1.000 absent in melanoma 1, transcript variant X2
3. HRH1 ENSGALG00000004930 13 1 - - - - - - - - - 1.000 histamine receptor H1 [Source:HGNC Symbol;Acc:HGNC:5182]
4. NOD1 ENSGALG00000036807 10 1 - - - - - - - - - 1.000 Gallus gallus nucleotide binding oligomerization domain containing 1 (NOD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318438]
5. TELO2 ENSGALG00000009297 1 1 - - - - - - - - - 1.000 telomere maintenance 2 [Source:HGNC Symbol;Acc:HGNC:29099]
6. LPAR5 ENSGALG00000014455 10 1 - - - - - - - - - 1.000 lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
7. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - - - - - - 1.000
8. PDGFRL ENSGALG00000013617 11 1 - - - - - - - - - 1.000 platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
9. KCNQ3 ENSGALG00000037626 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
10. FBXO15 ENSGALG00000013720 4 1 - - - - - - - - - 1.000 F-box protein 15 [Source:HGNC Symbol;Acc:HGNC:13617]
11. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - - - 1.000 Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
12. ENSGALG00000026498 ENSGALG00000026498 1 1 - - - - - - - - - 1.000
13. KCNK3 ENSGALG00000025971 2 1 - - - - - - - - - 1.000 potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]
14. B3GALT2 ENSGALG00000002477 13 1 - - - - - - - - - 1.000 beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
15. KIAA1755 3 1 - - - - - - - - - 1.000 KIAA1755 ortholog, transcript variant X2
16. ZNF777 ENSGALG00000038657 3 1 - - - - - - - - - 1.000 zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
17. ENSGALG00000018929 ENSGALG00000018929 1 1 - - - - - - - - - 1.000
18. SPTB ENSGALG00000036805 6 1 - - - - - - - - - 1.000 spectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]
19. CNIH3 ENSGALG00000009308 2 1 - - - - - - - - - 1.000 cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
20. RNGTT ENSGALG00000015787 12 0.969 - - 0.969 - - - - - - - RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:10073]
21. ZDHHC15 ENSGALG00000007800 24 0.968 - - - - - - - - - 0.968 zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
22. FBXL16 ENSGALG00000002443 11 0.96 - - - - - - - - - 0.960 F-box and leucine rich repeat protein 16 [Source:NCBI gene;Acc:416405]
23. DENND4A ENSGALG00000041403 57 0.952 - - - - - 0.952 - - - - DENN domain containing 4A [Source:HGNC Symbol;Acc:HGNC:24321]
24. OSBPL3 ENSGALG00000011007 23 0.928 - - 0.928 - - - - - - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
25. KCNK10 ENSGALG00000010598 7 0.925 - - - - - - - - - 0.925 potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
26. JADE2 ENSGALG00000006424 4 0.915 - - - - - - - - - 0.915 jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]
27. SH3BP5 ENSGALG00000039337 17 0.91 - - - - - 0.910 - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
28. ABCG5 ENSGALG00000009955 4 0.91 - - - - - 0.910 - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
29. ZHX1 ENSGALG00000034999 21 0.91 - - - - - 0.910 - - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
30. PHF21B ENSGALG00000014218 10 0.91 - - - - - 0.910 - - - - PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
31. GRAMD2 GRAMD2 3 0.91 - - - - - 0.910 - - - -
32. CDK19 ENSGALG00000015051 26 0.91 - - - - - 0.910 - - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
33. AOC1 13 0.91 - - - - - 0.910 - - - - amine oxidase, copper containing 1, transcript variant X2
34. PLEKHH1 ENSGALG00000009507 18 0.91 - - - - - 0.910 - - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
35. C18H17ORF67 ENSGALG00000024428 10 0.91 - - - - - 0.910 - - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
36. ENSGALG00000006114 ENSGALG00000006114 1 0.91 - - - - - 0.910 - - - -
37. MYL2 ENSGALG00000004582 2245 0.91 - - - - - 0.910 - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
38. NEK9 ENSGALG00000010314 6 0.91 - - - - - 0.910 - - - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
39. OVST ENSGALG00000011930 2 0.91 - - - - - 0.910 - - - - ovostatin [Source:NCBI gene;Acc:396151]
40. DAPK2 ENSGALG00000003336 3 0.91 - - - - - 0.910 - - - - death associated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:2675]
41. LOC416622 ENSGALG00000007030 30 0.91 - - - - - 0.910 - - - - transmembrane protein 180-like, transcript variant X8
42. YIPF7 ENSGALG00000014221 5 0.91 - - - - - 0.910 - - - - Yip1 domain family member 7 [Source:NCBI gene;Acc:422774]
43. GIPR 1 0.91 - - - - - 0.910 - - - - gastric inhibitory polypeptide receptor
44. TMC6 ENSGALG00000038875 6 0.91 - - - - - 0.910 - - - - transmembrane channel like 6 [Source:HGNC Symbol;Acc:HGNC:18021]
45. KLF15 ENSGALG00000036133 3 0.91 - - - - - 0.910 - - - - Kruppel like factor 15 [Source:HGNC Symbol;Acc:HGNC:14536]
46. SS1R SS1R 3 0.91 - - - - - 0.910 - - - -
47. LPGAT1 ENSGALG00000009848 33 0.91 - - - - - 0.910 - - - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
48. ENSGALG00000015324 ENSGALG00000015324 10 0.91 - - - - - 0.910 - - - -
49. NCEH1 ENSGALG00000009170 8 0.91 - - - - - 0.910 - - - - neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
50. SOWAHB 1 0.91 - - - - - 0.910 - - - - sosondowah ankyrin repeat domain family member B
51. DFNB59 ENSGALG00000023439 4 0.91 - - - - - 0.910 - - - - deafness, autosomal recessive 59, transcript variant X1
52. KLHL33 ENSGALG00000027742 18 0.905 - - 0.905 - - - - - - - kelch like family member 33, transcript variant X2
53. PLA2G4EL6 ENSGALG00000020458 4 0.905 - - 0.905 - - - - - - - phospholipase A2 group IVE-like 6
54. CPSF4L ENSGALG00000004441 4 0.905 - - 0.905 - - - - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
55. ENSGALG00000025997 ENSGALG00000025997 1 0.905 - - 0.905 - - - - - - -
56. LOC771085 ENSGALG00000016802 1 0.905 - - 0.905 - - - - - - - pinopsin-like, transcript variant X1
57. LOC425001 ENSGALG00000009468 7 0.905 - - 0.905 - - - - - - - uncharacterized LOC425001, transcript variant X2
58. ENSGALG00000022206 ENSGALG00000022206 2 0.905 - - 0.905 - - - - - - -
59. ENSGALG00000028102 ENSGALG00000028102 8 0.905 - - 0.905 - - - - - - -
60. ENSGALG00000011273 ENSGALG00000011273 9 0.905 - - 0.905 - - - - - - -
61. GPR143 ENSGALG00000016615 14 0.904 - - - - - 0.904 - - - - G protein-coupled receptor 143 [Source:NCBI gene;Acc:418652]
62. CLSTN2 ENSGALG00000037387 23 0.902 - - - - - 0.902 - - - - calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]
63. ADPRH ENSGALG00000015473 7 0.897 - - - - - 0.897 - - - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
64. KCNJ3 ENSGALG00000012537 6 0.895 - - - - - - - - - 0.895 potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
65. ENSGALG00000021386 ENSGALG00000021386 29 0.893 - - - - - 0.893 - - - -
66. IL22RA1 ENSGALG00000004221 71 0.884 - - - - - 0.884 - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
67. AQP3 ENSGALG00000002452 97 0.883 - - - - - 0.883 - - - - aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
68. LPAR6 ENSGALG00000016998 36 0.883 - - - - - 0.883 - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
69. VWC2 ENSGALG00000013081 492 0.862 - - - - - 0.862 - - - - von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
70. ARAP3 ENSGALG00000002562 3 0.852 - - - - - - - - - 0.852 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:HGNC:24097]
71. SNORD79 SNORD79 12 0.852 - - - - - 0.852 - - - -
72. INADL INADL 51 0.852 - - - - - 0.852 - - - -
73. IL-12B IL-12B 14 0.851 - - - - - 0.851 - - - -
74. SPINK4 ENSGALG00000043964 50 0.851 - - - - - 0.851 - - - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
75. SOCS1 ENSGALG00000007158 14 0.85 - - 0.850 - - - - - - - suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
76. SLC22A18 ENSGALG00000006454 24 0.85 - - 0.850 - - - - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
77. STK32A ENSGALG00000029195 27 0.848 - - - - - 0.848 - - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
78. GIT1 ENSGALG00000023703 174 0.842 - - - - - 0.842 - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
79. ENSGALG00000024441 ENSGALG00000024441 66 0.837 - - 0.837 - - - - - - -
80. CXorf36 ENSGALG00000016215 108 0.836 - - - - - 0.836 - - - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
81. ST6GALNAC1 ENSGALG00000001862 133 0.834 - - - - - 0.834 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396168]
82. TMTC1 ENSGALG00000012956 160 0.834 - - - - - 0.834 - - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
83. NUDT19 ENSGALG00000029498 90 0.828 - - - - - - - - - 0.828 nudix hydrolase 19 [Source:NCBI gene;Acc:427548]
84. MCM9 ENSGALG00000014883 8 0.825 - - 0.825 - - - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
85. MFSD9 ENSGALG00000016792 40 0.823 - - - - - 0.823 - - - - major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
86. LPL ENSGALG00000015425 15 0.819 - - 0.819 - - - - - - - lipoprotein lipase [Source:NCBI gene;Acc:396219]
87. SNORA74 SNORA74 8 0.817 - - 0.817 - - - - - - -
88. ENSGALG00000015857 ENSGALG00000015857 238 0.803 - - - - - 0.803 - - - -
89. PPP1R16B ENSGALG00000003568 25 0.802 - - - - - - - - - 0.802 protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
90. RAD54L ENSGALG00000010356 7 0.802 - - - - - - - - - 0.802 RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
91. SNORA56 SNORA56 7 0.802 - - - - - - - - - 0.802
92. TMPRSS7 ENSGALG00000015389 12 0.799 - - - - - 0.799 - - - - transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
93. AGTPBP1 ENSGALG00000012595 324 0.797 - - - - - 0.797 - - - - ATP/GTP binding protein 1 [Source:NCBI gene;Acc:427460]
94. CD200R1A CD200R1A 105 0.797 - - - - - - - - - 0.797
95. ENSGALG00000028962 ENSGALG00000028962 7 0.797 - - 0.797 - - - - - - -
96. TRIM29 ENSGALG00000042360 34 0.796 - - - - - - - - - 0.796 tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
97. ZC2HC1A ENSGALG00000035932 17 0.796 - - - - - - - - - 0.796 zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
98. NIT2 ENSGALG00000015275 278 0.791 - - - - - 0.791 - - - - nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]
99. D1A D1A 1026 0.789 - - 0.789 - - - - - - -
100. DCHS1 ENSGALG00000017334 12 0.784 - - 0.784 - - - - - - - dachsous cadherin-related 1, transcript variant X1

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA