Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYNPO

Gene Name Gene ID Reads Annotation
SYNPO 2 synaptopodin, transcript variant X2










Genes with expression patterns similar to SYNPO

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYNPO 2 4 - - 1.000 - 1.000 - - 1.000 1.000 synaptopodin, transcript variant X2
2. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
3. ldlrap1b ENSDARG00000039750 2 2 - - 1.000 - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
4. si:dkey-9i5.1 si:dkey-9i5.1 36 2 - - - - 1.000 - - - 1.000
5. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
6. si:ch1073-351l9.1 si:ch1073-351l9.1 1 2 - - - - 1.000 - - - 1.000
7. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
8. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
9. ATP9A ENSDARG00000115869 9 1.757 - - - - 0.908 - - 0.849 - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
10. si:ch211-215m21.29 si:ch211-215m21.29 5 1.731 - - - - - - - 0.731 1.000
11. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
12. CR391967.1 CR391967.1 135 1.706 - - 0.899 - - - - - 0.807
13. pomcb ENSDARG00000069307 72 1.673 - - 0.739 - - - - - 0.934 proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
14. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
15. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
16. F13A1 F13A1 1 1 - - - - 1.000 - - - -
17. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
18. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
19. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
20. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
21. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
22. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
23. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
24. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
25. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
26. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
27. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
28. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
29. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
30. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
31. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
32. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
33. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
34. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
35. ODF2 ODF2 6 1 - - - - 1.000 - - - -
36. UNC5CL UNC5CL 4 1 - - - - - - - 1.000 -
37. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
38. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
39. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
40. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
41. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
42. si:ch211-260g14.10 si:ch211-260g14.10 14 1 - - - - - - - 1.000 -
43. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
44. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
45. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
46. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
47. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
48. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
49. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
50. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
51. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
52. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
53. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
54. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
55. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
56. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
57. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
58. wibg wibg 2 1 - - - - 1.000 - - - -
59. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
60. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
61. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
62. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
63. BX511066.3 BX511066.3 1 1 - - - - - - - 1.000 -
64. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
65. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
66. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
67. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
68. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
69. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
70. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
71. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
72. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
73. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
74. ZNF512B ENSDARG00000071055 7 1 - - - - - - - 1.000 - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
75. LRCH4 ENSDARG00000068258 22 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
76. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
77. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
78. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
79. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
80. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
81. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
82. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
83. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
84. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
85. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
86. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
87. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
88. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
89. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
90. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
91. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
92. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
93. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
94. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
95. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
96. MEI1 MEI1 2 1 - - - - - - - - 1.000
97. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
98. htr5al htr5al 6 1 - - - - - - - - 1.000
99. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
100. psme2 ENSDARG00000033144 3 1 - - - - - - - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]

There are 442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA