Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNPO

Gene Name Gene ID Reads Annotation
SYNPO 2 synaptopodin, transcript variant X2










Genes with expression patterns similar to SYNPO

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYNPO 2 4 - - 1.000 - 1.000 - - 1.000 1.000 synaptopodin, transcript variant X2
2. si:dkey-9i5.1 si:dkey-9i5.1 36 2 - - - - 1.000 - - - 1.000
3. si:dkey-276l13.5 si:dkey-276l13.5 3 2 - - - - 1.000 - - - 1.000
4. ldlrap1b ENSDARG00000039750 2 2 - - 1.000 - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
5. wdr27 ENSDARG00000053386 2 2 - - - - 1.000 - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
6. SSTR2 SSTR2 12 2 - - - - 1.000 - - - 1.000
7. si:ch1073-351l9.1 si:ch1073-351l9.1 1 2 - - - - 1.000 - - - 1.000
8. GPT GPT 2 1.877 - - - - 0.877 - - - 1.000
9. ATP9A ENSDARG00000115869 9 1.757 - - - - 0.908 - - 0.849 - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
10. si:ch211-215m21.29 si:ch211-215m21.29 5 1.731 - - - - - - - 0.731 1.000
11. CR318624.1 ENSDARG00000094618 5 1.728 - - - - 0.728 - - - 1.000
12. CR391967.1 CR391967.1 135 1.706 - - 0.899 - - - - - 0.807
13. pomcb ENSDARG00000069307 72 1.673 - - 0.739 - - - - - 0.934 proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
14. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
15. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
16. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
17. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
18. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
19. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
20. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
21. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
22. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
23. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
24. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
25. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
26. si:ch211-260g14.10 si:ch211-260g14.10 14 1 - - - - - - - 1.000 -
27. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
28. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
29. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
30. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
31. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
32. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
33. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
34. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
35. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
36. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
37. BX511066.3 BX511066.3 1 1 - - - - - - - 1.000 -
38. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
39. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
40. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
41. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
42. wibg wibg 2 1 - - - - 1.000 - - - -
43. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
44. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
45. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
46. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
47. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
48. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
49. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
50. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
51. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
52. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
53. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
54. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
55. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
56. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
57. F13A1 F13A1 1 1 - - - - 1.000 - - - -
58. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
59. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
60. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
61. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
62. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
63. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
64. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
65. UNC5CL UNC5CL 4 1 - - - - - - - 1.000 -
66. ODF2 ODF2 6 1 - - - - 1.000 - - - -
67. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
68. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
69. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
70. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
71. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
72. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
73. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
74. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
75. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
76. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
77. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
78. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
79. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
80. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
81. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
82. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
83. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
84. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
85. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
86. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - 1.000 - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
87. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
88. hesx1 ENSDARG00000060734 2 1 - - - - 1.000 - - - - HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]
89. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
90. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
91. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
92. CABZ01102230.1 CABZ01102230.1 1 1 - - - - 1.000 - - - -
93. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
94. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
95. CR848836.1 ENSDARG00000097508 1 1 - - - - 1.000 - - - -
96. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
97. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
98. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
99. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
100. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]

There are 442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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