Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNM

Gene Name Gene ID Reads Annotation
SYNM ENSGALG00000007048 705 synemin [Source:NCBI gene;Acc:395599]











Genes with expression patterns similar to SYNM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNM ENSGALG00000007048 705 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synemin [Source:NCBI gene;Acc:395599]
2. FAXDC2 ENSGALG00000003972 172 1 - - - - - - - 1.000 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
3. ENSGALG00000006278 ENSGALG00000006278 202 1 - - - - - - - 1.000 - -
4. ARHGEF18 ENSGALG00000003572 224 1 - - - - - - - 1.000 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
5. TNNI1 ENSGALG00000000313 4069 0.999 - - - - - - - 0.999 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
6. KIF1A ENSGALG00000006221 1989 0.999 - - - - - - - 0.999 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
7. EFR3B ENSGALG00000016605 234 0.999 - - - - - - - 0.999 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
8. CCDC15 1759 0.999 - - - - - - - 0.999 - - coiled-coil domain containing 15
9. CNPY3 ENSGALG00000028471 1413 0.998 - - - - - - - 0.998 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
10. KCNK2 ENSGALG00000009687 1552 0.998 - - - - - - - 0.998 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
11. ADAMTS6 ENSGALG00000014751 1293 0.997 - - - - - - - 0.997 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
12. MIEN1 ENSGALG00000026328 3396 0.997 - - - - - - - 0.997 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
13. RAC2 ENSGALG00000012456 987 0.997 - - - - - - - 0.997 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
14. FSBP 3152 0.997 - - - - - - - 0.997 - - fibrinogen silencer binding protein
15. TMEM200C ENSGALG00000030210 1434 0.997 - - - - - - - 0.997 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
16. NEO1 ENSGALG00000001774 10165 0.996 - - - - - - - 0.996 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
17. DIMT1 ENSGALG00000020569 5150 0.995 - - - - - - - 0.995 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
18. ENSGALG00000002852 ENSGALG00000002852 2687 0.995 - - - - - - - 0.995 - -
19. RAD52 ENSGALG00000039171 6989 0.995 - - - - - - - 0.995 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
20. PRDM6 ENSGALG00000005351 2078 0.994 - - - - - - - 0.994 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
21. RAB20 ENSGALG00000016844 3250 0.994 - - - - - - - 0.994 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
22. PIGB ENSGALG00000037734 2193 0.993 - - - - - - - 0.993 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
23. SFXN1 ENSGALG00000033956 2713 0.991 - - - - - - - 0.991 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
24. SIRT6 ENSGALG00000001245 3716 0.989 - - - - - - - 0.989 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
25. TEX10 ENSGALG00000013438 3121 0.989 - - - - - - - 0.989 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
26. TMEM26 ENSGALG00000025862 2222 0.988 - - - - - - - 0.988 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
27. SULF1 ENSGALG00000039553 5115 0.987 - - - - - - - 0.987 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
28. DEPDC1B ENSGALG00000014729 5334 0.986 - - - - - - - 0.986 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
29. ATP11B ENSGALG00000008839 3455 0.986 - - - - - - - 0.986 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
30. ZCCHC10 ENSGALG00000036666 5148 0.983 - - - - - - - 0.983 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
31. MRPL32 ENSGALG00000037258 6861 0.983 - - - - - - - 0.983 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
32. MTFR2 ENSGALG00000019967 4436 0.982 - - - - - - - 0.982 - - mitochondrial fission regulator 2, transcript variant X1
33. IVD ENSGALG00000040267 5820 0.981 - - - - - - - 0.981 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
34. DCK ENSGALG00000028501 8675 0.981 - - - - - - - 0.981 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
35. DAB2 ENSGALG00000003803 6143 0.981 - - - - - - - 0.981 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
36. NKIRAS2 ENSGALG00000028971 3414 0.981 - - - - - - - 0.981 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
37. HPS4 ENSGALG00000005595 2217 0.981 - - - - - - - 0.981 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
38. AVENAII AVENAII 4552 0.979 - - - - - - - 0.979 - -
39. TMEM60 ENSGALG00000008330 6303 0.979 - - - - - - - 0.979 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
40. BLCAP ENSGALG00000027126 12200 0.978 - - - - - - - 0.978 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
41. CDKAL1 ENSGALG00000012677 4733 0.976 - - - - - - - 0.976 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
42. BEND5 ENSGALG00000010505 3298 0.975 - - - - - - - 0.975 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
43. ACVR2B ENSGALG00000006158 8692 0.974 - - - - - - - 0.974 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
44. MYO9A ENSGALG00000033618 4505 0.973 - - - - - - - 0.973 - - myosin IXA, transcript variant X10
45. LRRC59 ENSGALG00000007673 2081 0.969 - - - - - - - 0.969 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
46. COPS8 ENSGALG00000033385 10166 0.969 - - - - - - - 0.969 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
47. SPR ENSGALG00000000067 3456 0.969 - - - - - - - 0.969 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
48. TTC37 ENSGALG00000014670 5715 0.963 - - - - - - - 0.963 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
49. YIPF1 5945 0.96 - - - - - - - 0.960 - - Yip1 domain family member 1, transcript variant 4
50. KLHL18 ENSGALG00000005582 3053 0.958 - - - - - - - 0.958 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
51. GNL2 ENSGALG00000001973 10148 0.957 - - - - - - - 0.957 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
52. PREP ENSGALG00000015405 17050 0.956 - - - - - - - 0.956 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
53. SNRPA1 ENSGALG00000007170 17764 0.949 - - - - - - - 0.949 - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
54. EVPL ENSGALG00000002108 591 0.946 - - - - - - - 0.946 - - envoplakin
55. GATC ENSGALG00000007195 8610 0.945 - - - - - - - 0.945 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
56. CCDC104 CCDC104 6584 0.941 - - - - - - - 0.941 - -
57. AP5Z1 ENSGALG00000040528 4302 0.94 - - - - - - - 0.940 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
58. NDUFB4 ENSGALG00000027688 8951 0.939 - - - - - - - 0.939 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
59. CCDC58 ENSGALG00000014413 9022 0.938 - - - - - - - 0.938 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
60. STX2 ENSGALG00000002536 10438 0.936 - - - - - - - 0.936 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
61. TM9SF2L ENSGALG00000006487 5566 0.93 - - - - - - - 0.930 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
62. C17H9ORF16 C17H9ORF16 7908 0.919 - - - - - - - 0.919 - -
63. MAGT1 ENSGALG00000007861 9105 0.915 - - - - - - - 0.915 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
64. MRPL37 ENSGALG00000010761 10596 0.904 - - - - - - - 0.904 - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
65. SNORA72 SNORA72 27695 0.9 - - - - - - - 0.900 - -
66. PDCD10 ENSGALG00000009477 7061 0.898 - - - - - - - 0.898 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
67. MRPL42 ENSGALG00000011293 15145 0.894 - - - - - - - 0.894 - - mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
68. GGT1 ENSGALG00000006565 690 0.891 - - - - - - - 0.891 - - gamma-glutamyltransferase 1, transcript variant X11
69. ACVR1 ENSGALG00000037301 6448 0.889 - - - - - - - 0.889 - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
70. RAB11A ENSGALG00000007615 9154 0.88 - - - - - - - 0.880 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
71. GRPEL1 ENSGALG00000015549 11246 0.872 - - - - - - - 0.872 - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
72. RBM15B 5416 0.871 - - - - - - - 0.871 - - RNA binding motif protein 15B
73. RNF220 ENSGALG00000010109 3114 0.862 - - - - - - - 0.862 - - ring finger protein 220 [Source:NCBI gene;Acc:424580]
74. PRRC2C 3925 0.862 - - - - - - - 0.862 - - proline rich coiled-coil 2C, transcript variant X17
75. KIF3A ENSGALG00000006860 6209 0.861 - - - - - - - 0.861 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
76. CORO1C ENSGALG00000004901 7055 0.861 - - - - - - - 0.861 - - coronin 1C [Source:NCBI gene;Acc:416893]
77. ZNHIT3 ENSGALG00000026031 8652 0.858 - - - - - - - 0.858 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
78. MCFD2 ENSGALG00000010017 8905 0.858 - - - - - - - 0.858 - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
79. EIF3I ENSGALG00000003337 28832 0.857 - - - - - - - 0.857 - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
80. CDK9 ENSGALG00000035576 3659 0.856 - - - - - - - 0.856 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
81. SPEN ENSGALG00000036932 9688 0.851 - - - - - - - 0.851 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
82. FBXW11 ENSGALG00000002229 5805 0.85 - - - - - - - 0.850 - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
83. TP53BP2 ENSGALG00000042816 12368 0.847 - - - - - - - 0.847 - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
84. PSMC5 ENSGALG00000000349 21346 0.843 - - - - - - - 0.843 - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
85. YIPF3 ENSGALG00000041037 6126 0.841 - - - - - - - 0.841 - - Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
86. ACBD3 ENSGALG00000009246 8405 0.841 - - - - - - - 0.841 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
87. C C 7669 0.84 - - - - - - - 0.840 - -
88. EDF1 ENSGALG00000038003 6757 0.832 - - - - - - - 0.832 - - endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
89. BMP7 ENSGALG00000007668 6645 0.825 - - - - - - - 0.825 - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
90. DCLK3 ENSGALG00000034493 50 0.823 - - - - - - - - - 0.823 doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
91. DNAJC9 ENSGALG00000002701 19249 0.823 - - - - - - - 0.823 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
92. TSPAN13 ENSGALG00000027240 8999 0.813 - - - - - - - 0.813 - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
93. RPA2 39663 0.812 - - - - - - - 0.812 - - replication protein A2
94. INTU ENSGALG00000010170 78 0.81 - - - - - - 0.810 - - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
95. TMEM167A ENSGALG00000027332 13862 0.809 - - - - - - - 0.809 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
96. TSHZ3 ENSGALG00000004528 3964 0.806 - - - - - - - 0.806 - - teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
97. KIAA0020 KIAA0020 14353 0.806 - - - - - - - 0.806 - -
98. CSE1L ENSGALG00000004707 20653 0.805 - - - - - - - 0.805 - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
99. C10orf71 ENSGALG00000027353 19 0.805 - - - - - - 0.805 - - - chromosome 10 open reading frame 71 [Source:HGNC Symbol;Acc:HGNC:26973]
100. WDR33 ENSGALG00000002043 6340 0.798 - - - - - - - 0.798 - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]

There are 36 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA