Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNJ2BP_1

Gene Name Gene ID Reads Annotation
SYNJ2BP_1 ENSGALG00000009387, ENSGALG00000035537 169 synaptojanin 2 binding protein, transcript variant X2











Genes with expression patterns similar to SYNJ2BP_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNJ2BP_1 ENSGALG00000009387, ENSGALG00000035537 169 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 synaptojanin 2 binding protein, transcript variant X2
2. DCUN1D3 ENSGALG00000002267 6 0.844 - - - - - 0.844 - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
3. GLDC ENSGALG00000015053 103 0.78 - - - - - 0.780 - - - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
4. WASF3 ENSGALG00000017103 50 0.773 - - - - - - - 0.773 - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
5. IMPDH2 ENSGALG00000006910 77 0.773 - - - - - - - 0.773 - - inosine monophosphate dehydrogenase 2 [Source:NCBI gene;Acc:416058]
6. PHOSPHO2 ENSGALG00000020736 92 0.772 - - - - - 0.772 - - - - phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]
7. LOC770492 ENSGALG00000027778 695 0.77 - - - - - 0.770 - - - - ras-related and estrogen-regulated growth inhibitor-like
8. RORALPHA1 RORALPHA1 119 0.766 - - - - - - - 0.766 - -
9. MYBL1 ENSGALG00000033304 29 0.765 - - - - - - - - - 0.765 MYB proto-oncogene like 1 [Source:NCBI gene;Acc:396158]
10. SPERT ENSGALG00000016981 145 0.758 - - - - - 0.758 - - - - spermatid associated [Source:NCBI gene;Acc:418848]
11. MYO1D ENSGALG00000000674 14 0.746 - - - - - 0.746 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
12. RIBC2 ENSGALG00000014232 13 0.746 - - - - - 0.746 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
13. CEP170B ENSGALG00000011639 71 0.742 - - - - - 0.742 - - - - centrosomal protein 170B, transcript variant X13
14. BTC ENSGALG00000028608 10 0.734 - - - - - 0.734 - - - - betacellulin [Source:NCBI gene;Acc:448833]
15. SMG7 ENSGALG00000004667 707 0.732 - - - - - 0.732 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
16. PCYT1A ENSGALG00000007474 17 0.731 - - - - - 0.731 - - - - phosphate cytidylyltransferase 1, choline, alpha [Source:HGNC Symbol;Acc:HGNC:8754]
17. UROC1 ENSGALG00000006306 75 0.731 - - - - - 0.731 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
18. LFABP LFABP 5 0.73 - - - - - 0.730 - - - -
19. ESAM ENSGALG00000032943 1 0.73 - - - - - 0.730 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
20. ENSGALG00000026341 ENSGALG00000026341 1 0.73 - - - - - 0.730 - - - -
21. ENSGALG00000020819 ENSGALG00000020819 2 0.73 - - - - - 0.730 - - - -
22. RASSF6 ENSGALG00000011664 7 0.73 - - - - - 0.730 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
23. ENSGALG00000018528 ENSGALG00000018528 1 0.73 - - - - - 0.730 - - - -
24. KLHL1 ENSGALG00000016907 21 0.73 - - - - - 0.730 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
25. FIP1L1 ENSGALG00000013943 15 0.73 - - - - - 0.730 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
26. Six3os1 Six3os1 1 0.73 - - - - - 0.730 - - - -
27. ENSGALG00000021375 ENSGALG00000021375 1 0.73 - - - - - 0.730 - - - -
28. SLC30A1 ENSGALG00000009858 5 0.73 - - - - - 0.730 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
29. HAPLN4 ENSGALG00000026563 9 0.73 - - - - - 0.730 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
30. EDNRB2 ENSGALG00000007466 1 0.73 - - - - - 0.730 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
31. SYT15 ENSGALG00000002046 3 0.73 - - - - - 0.730 - - - - synaptotagmin 15, transcript variant X1
32. ENSGALG00000023027 ENSGALG00000023027 5 0.73 - - - - - 0.730 - - - -
33. TTC28 ENSGALG00000005676 36 0.73 - - - - - 0.730 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
34. GGT5 ENSGALG00000040504 24 0.73 - - - - - 0.730 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
35. gga-mir-6579-2 ENSGALG00000035346 7 0.73 - - - - - 0.730 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
36. GPR114 GPR114 46 0.73 - - - - - 0.730 - - - -
37. SPTBN5 395 0.73 - - - - - 0.730 - - - - spectrin beta, non-erythrocytic 5
38. FXYD2 ENSGALG00000007320 168 0.73 - - - - - 0.730 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
39. RBM47 ENSGALG00000014267 6 0.73 - - - - - 0.730 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
40. TRAIL-LIKE ENSGALG00000007240 8 0.73 - - - - - 0.730 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
41. NKX2-5 ENSGALG00000002886 81 0.73 - - - - - 0.730 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
42. CNGA3 ENSGALG00000039826 3 0.73 - - - - - 0.730 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
43. LDLRAD3 ENSGALG00000038913 4 0.73 - - - - - 0.730 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
44. PTPN23 ENSGALG00000038522 93 0.73 - - - - - 0.730 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
45. NPR2 ENSGALG00000027630 871 0.724 - - - 0.724 - - - - - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
46. RSF1 ENSGALG00000039068 3438 0.724 - - - - - - 0.724 - - - remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
47. VASN 583 0.724 - - - - - - 0.724 - - - vasorin, transcript variant X1
48. AMPD1 ENSGALG00000002082 228 0.723 - - - - - 0.723 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
49. MLLT3 ENSGALG00000015078 502 0.723 - - - - - - 0.723 - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
50. P2RX5 ENSGALG00000004613 31 0.71 - - - - - - - - - 0.710 purinergic receptor P2X 5 [Source:NCBI gene;Acc:395507]
51. EFCAB12 EFCAB12 15 0.709 - - - - - 0.709 - - - -
52. RECQL5 ENSGALG00000002424 16 0.706 - - - - - 0.706 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
53. CMTR2 ENSGALG00000002356 3 0.706 - - - - - 0.706 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
54. POLR3B ENSGALG00000012655 704 0.703 - - - - - 0.703 - - - - Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
55. ENSGALG00000026058 ENSGALG00000026058 144 0.702 - - - 0.702 - - - - - -
56. RPLP1 ENSGALG00000030878 445592 0.701 - - - 0.701 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA