Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYNGR3

Gene Name Gene ID Reads Annotation
SYNGR3 ENSGALG00000005589 61 synaptogyrin 3 [Source:NCBI gene;Acc:416548]











Genes with expression patterns similar to SYNGR3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNGR3 ENSGALG00000005589 61 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 synaptogyrin 3 [Source:NCBI gene;Acc:416548]
2. PTGS1 ENSGALG00000001314 7 0.929 - - - - - - 0.929 - - - prostaglandin-endoperoxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:9604]
3. NIPAL4 ENSGALG00000039687 29 0.929 - - - - - - 0.929 - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
4. SH3PXD2B ENSGALG00000002831 7 0.929 - - - - - - 0.929 - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
5. KCNS2 ENSGALG00000043764 9 0.929 - - - - - - 0.929 - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
6. IQSEC1 ENSGALG00000005042 24 0.929 - - - - - - 0.929 - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
7. C18orf63 ENSGALG00000044510 3 0.929 - - - - - - 0.929 - - - chromosome 18 open reading frame 63 [Source:HGNC Symbol;Acc:HGNC:40037]
8. ENSGALG00000011926 ENSGALG00000011926 6 0.929 - - - - - - 0.929 - - -
9. TUBGCP3 ENSGALG00000016836 332 0.929 - - - - - - 0.929 - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
10. TNIP2 ENSGALG00000015666 28 0.929 - - - - - - 0.929 - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
11. GGPS1 ENSGALG00000042853 303 0.926 - - - - - - 0.926 - - - geranylgeranyl diphosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:4249]
12. PLXNA1 ENSGALG00000006097 886 0.914 - - - - - - 0.914 - - - plexin A1 [Source:HGNC Symbol;Acc:HGNC:9099]
13. RECQL5 ENSGALG00000002424 16 0.913 - - - - - - 0.913 - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
14. TRAK2 ENSGALG00000008370 46 0.912 - - - - - - 0.912 - - - trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
15. PLEKHA1 ENSGALG00000034548 34 0.908 - - - - - - 0.908 - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
16. DCLRE1C ENSGALG00000013926 34 0.907 - - - - - - 0.907 - - - DNA cross-link repair 1C [Source:NCBI gene;Acc:430764]
17. EHBP1 654 0.903 - - - - - - 0.903 - - - EH domain binding protein 1, transcript variant X17
18. IFITM5 ENSGALG00000004239 56 0.9 - - - - - - 0.900 - - - interferon induced transmembrane protein 5 [Source:NCBI gene;Acc:422992]
19. PLEKHM2 ENSGALG00000003439 44 0.899 - - - - - - 0.899 - - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
20. GALR GALR 17 0.896 - - - - - - 0.896 - - -
21. ENSGALG00000025721 ENSGALG00000025721 33 0.896 - - - - - - 0.896 - - -
22. YAP1 ENSGALG00000038154 24 0.896 - - - - - - 0.896 - - - Yes associated protein 1 [Source:NCBI gene;Acc:396171]
23. Sep-02 Sep-02 206 0.894 - - - - - - 0.894 - - -
24. ENSGALG00000023180 ENSGALG00000023180 83 0.893 - - - - - - 0.893 - - -
25. PLXNA4 ENSGALG00000006473 125 0.89 - - - - - - 0.890 - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
26. ARMC7 ENSGALG00000007961 217 0.883 - - - - - - 0.883 - - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
27. NCAPD3 ENSGALG00000001491 221 0.88 - - - - - - 0.880 - - - non-SMC condensin II complex subunit D3, transcript variant X3
28. SLC44A5 ENSGALG00000011379 41 0.874 - - - - - - 0.874 - - - solute carrier family 44 member 5 [Source:HGNC Symbol;Acc:HGNC:28524]
29. C16orf62 C16orf62 316 0.863 - - - - - - 0.863 - - -
30. GNAQ ENSGALG00000015177 82 0.862 - - - - - - 0.862 - - - G protein subunit alpha q [Source:NCBI gene;Acc:427262]
31. FBXO11 ENSGALG00000008944 95 0.861 - - - - - - 0.861 - - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
32. EVC2 ENSGALG00000015029 51 0.858 - - - - - - 0.858 - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
33. ANKRD34B ENSGALG00000044727 9 0.854 - - - - - - 0.854 - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
34. MPHOSPH9 ENSGALG00000003419 227 0.853 - - - - - - 0.853 - - - M-phase phosphoprotein 9 [Source:HGNC Symbol;Acc:HGNC:7215]
35. PCDH7 ENSGALG00000033883 6 0.84 - - - - - 0.840 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
36. PAFAH2 ENSGALG00000021658 68 0.835 - - - - - - 0.835 - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
37. SPINK5 SPINK5 195 0.829 - - - - - - 0.829 - - -
38. ZBTB34 ENSGALG00000023407 198 0.826 - - - - - - 0.826 - - - zinc finger and BTB domain containing 34 [Source:NCBI gene;Acc:417090]
39. SIN3B ENSGALG00000003771 60 0.825 - - - - - - 0.825 - - - SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
40. ENSGALG00000014539 ENSGALG00000014539 31 0.82 - - - - - - 0.820 - - -
41. RBP4 ENSGALG00000015374 122 0.82 - - - - - - 0.820 - - - retinol binding protein 4 [Source:NCBI gene;Acc:396454]
42. LOC100857745 ENSGALG00000027114 118 0.816 - - - - - - 0.816 - - - collagen alpha-1(I) chain-like
43. SLC9A9 ENSGALG00000002374 179 0.815 - - - - - - 0.815 - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
44. KCTD17 ENSGALG00000042419 90 0.814 - - - - - - 0.814 - - - potassium channel tetramerization domain containing 17 [Source:HGNC Symbol;Acc:HGNC:25705]
45. CHRM2 ENSGALG00000012894 21 0.81 - - - - - - - 0.810 - - cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
46. CCDC147 CCDC147 53 0.81 - - - - - - - 0.810 - -
47. ATF2 ENSGALG00000009287 73 0.805 - - - - - 0.805 - - - - activating transcription factor 2 [Source:NCBI gene;Acc:395727]
48. TRPA1 ENSGALG00000034751 148 0.805 - - - - - - - 0.805 - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
49. NMUR1 ENSGALG00000007714 32 0.8 - - - - - - 0.800 - - - Gallus gallus neuromedin U receptor 1 (NMUR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318436]
50. MTMR7 13 0.798 - - - - - 0.798 - - - - myotubularin related protein 7, transcript variant X1
51. SOHO-1 ENSGALG00000015599 110 0.795 - - - - - - 0.795 - - - sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
52. CTTN ENSGALG00000007700 709 0.792 - - - - - - 0.792 - - - cortactin [Source:NCBI gene;Acc:396455]
53. ENSGALG00000023172 ENSGALG00000023172 61 0.792 - - - - - - 0.792 - - -
54. ADAMTS20 ENSGALG00000009572 67 0.791 - - - - - - 0.791 - - - ADAM metallopeptidase with thrombospondin type 1 motif 20 [Source:HGNC Symbol;Acc:HGNC:17178]
55. SMAD7A SMAD7A 78 0.79 - - - - - - 0.790 - - -
56. DALRD3 ENSGALG00000036976 46 0.789 - - - - - - 0.789 - - - DALR anticodon binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25536]
57. GLA ENSGALG00000004948 97 0.787 - - - - - - 0.787 - - - galactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]
58. PDPR ENSGALG00000002690 45 0.787 - - - - - - - 0.787 - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
59. C9orf152 C9orf152 3 0.786 - - - - - - - 0.786 - -
60. MLNR ENSGALG00000017003 10 0.786 - - - - - - - 0.786 - - motilin receptor [Source:NCBI gene;Acc:428072]
61. FAM101B FAM101B 1468 0.786 - - - - - - 0.786 - - -
62. ATP6V1A ENSGALG00000014800 4 0.786 - - - - - - - 0.786 - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
63. CCDC39 ENSGALG00000021855 23 0.786 - - - - - - - 0.786 - - coiled-coil domain containing 39
64. SYN3 5 0.785 - - - - 0.785 - - - - - synapsin III
65. ADRA2C ENSGALG00000015608 42 0.785 - - - - - - - 0.785 - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
66. SMAD9 ENSGALG00000017050 11 0.785 - - - - - - - 0.785 - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
67. GNPTAB ENSGALG00000012763 435 0.785 - - - - - - 0.785 - - - N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:HGNC Symbol;Acc:HGNC:29670]
68. CHFR ENSGALG00000002180 17 0.785 - - - - - - - 0.785 - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
69. NMRK2 ENSGALG00000025751 57 0.783 - - - - - - - 0.783 - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
70. ASTE1 ENSGALG00000036171 155 0.779 - - - - - - - 0.779 - - asteroid homolog 1 (Drosophila), transcript variant X3
71. MANSC4 32 0.775 - - - - - - 0.775 - - - MANSC domain containing 4, transcript variant X1
72. ENSGALG00000023084 ENSGALG00000023084 10 0.77 - - - - - 0.770 - - - -
73. HERC1 ENSGALG00000003381 672 0.77 - - - - - - 0.770 - - - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
74. CD200R1A CD200R1A 105 0.769 - - - - - 0.769 - - - -
75. KCNMB4 ENSGALG00000010044 377 0.769 - - - - - - - 0.769 - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
76. C9ORF9 C9ORF9 13 0.769 - - - - - - - 0.769 - -
77. ELOVL6 ENSGALG00000012131 256 0.767 - - - - - - 0.767 - - - ELOVL fatty acid elongase 6 [Source:NCBI gene;Acc:428772]
78. TICRR ENSGALG00000006631 495 0.767 - - - - - - - 0.767 - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
79. ABCB11 ENSGALG00000010891 24 0.767 - - - - - - - 0.767 - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
80. SETD5 ENSGALG00000006571 1499 0.766 - - - - - - 0.766 - - - SET domain containing 5 [Source:NCBI gene;Acc:416046]
81. FRRS1 ENSGALG00000005418 332 0.766 - - - - - - 0.766 - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
82. DENND5A ENSGALG00000005840 54 0.766 - - - - - - 0.766 - - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
83. ENSGALG00000005389 ENSGALG00000005389 553 0.764 - - - - - - 0.764 - - -
84. MCF2 ENSGALG00000006562 59 0.762 - - - - - - - 0.762 - - MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]
85. CRAT ENSGALG00000037443 78 0.762 - - - - - - - 0.762 - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
86. UBTD1 ENSGALG00000029166 1237 0.76 - - - - - - - 0.760 - - ubiquitin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25683]
87. KLF11 ENSGALG00000016440 65 0.758 - - - - - - - - - 0.758 Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
88. CASP7 ENSGALG00000008933 506 0.756 - - - - - 0.756 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
89. DMAP1 ENSGALG00000010104 237 0.755 - - - - - - - 0.755 - - DNA methyltransferase 1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18291]
90. RAMP1 ENSGALG00000003821 389 0.754 - - - - - - - 0.754 - - receptor activity modifying protein 1 [Source:HGNC Symbol;Acc:HGNC:9843]
91. EXD3 30 0.754 - - - - - - - - - 0.754 exonuclease 3'-5' domain containing 3, transcript variant X23
92. ENSGALG00000004643 ENSGALG00000004643 2297 0.754 - - - - - 0.754 - - - -
93. ENSGALG00000026584 ENSGALG00000026584 77 0.753 - - - - - - - - - 0.753
94. NKIRAS1 ENSGALG00000011289 311 0.751 - - - - - - 0.751 - - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
95. FHL5 ENSGALG00000015573 321 0.75 - - - - - - 0.750 - - - four and a half LIM domains 5 [Source:NCBI gene;Acc:421803]
96. ATP8B1 ENSGALG00000030834 521 0.749 - - - - - - 0.749 - - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
97. GAD2 ENSGALG00000040436 124 0.749 - - - - - - 0.749 - - - glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
98. SMCHD1 ENSGALG00000014811 730 0.747 - - - - - - 0.747 - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
99. DERL3 ENSGALG00000005994 1499 0.747 - - - - - - 0.747 - - - derlin 3 [Source:NCBI gene;Acc:416934]
100. SPINK2 SPINK2 202 0.746 - - - - - - 0.746 - - -

There are 36 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA