Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNE2

Gene Name Gene ID Reads Annotation
SYNE2 ENSGALG00000011811 5542 spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]











Genes with expression patterns similar to SYNE2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNE2 ENSGALG00000011811 5542 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
2. TTC39A ENSGALG00000010540 1025 1.762 - - 0.769 - - - - 0.993 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
3. UBQLN1 ENSGALG00000012585 5158 1.749 - - 0.756 - - - - 0.993 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
4. NABP1 ENSGALG00000025884 4195 1.732 - - - - - - 0.737 0.995 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
5. NDUFAF2 ENSGALG00000027564 7302 1.728 - - 0.739 - - - - 0.989 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
6. MICU3 ENSGALG00000013661 1466 1.699 - - - - - - 0.726 0.973 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
7. HAPLN1 ENSGALG00000015627 14942 1.698 - - - - - - 0.714 0.984 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
8. CCT8 ENSGALG00000015821 12161 1.588 - - 0.871 - - - - - - 0.717 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
9. RB1CC1 ENSGALG00000015259 4211 1.57 - - 0.864 - - - 0.706 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
10. ZNF395 ENSGALG00000034140 1868 1.565 - - 0.831 - - - - - - 0.734 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
11. FRMD3 ENSGALG00000012577 999 1.559 - - 0.827 - - - - - - 0.732 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
12. USP15 ENSGALG00000030024 2761 1.555 - - 0.847 - - - 0.708 - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
13. GPR107 ENSGALG00000004052 3392 1.551 - - 0.801 - - - 0.750 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
14. KIAA1551 ENSGALG00000045168 3435 1.527 - - 0.777 - - - - - - 0.750 KIAA1551, transcript variant X1
15. CIB1 ENSGALG00000008302 13946 1.523 - - - - - - 0.701 0.822 - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
16. HDHD1 HDHD1 2928 1.503 - - - - - - - 0.732 - 0.771
17. TMEM237 ENSGALG00000008381 1317 1.495 - - - - - - - - 0.783 0.712 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
18. TMEM128 ENSGALG00000014992 6567 1.495 - - 0.784 - - - - - - 0.711 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
19. FUBP1 ENSGALG00000008939 2850 1.49 - - 0.769 - - - - - - 0.721 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
20. CWC27 ENSGALG00000014747 8389 1.479 - - 0.775 - - - 0.704 - - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
21. ENSGALG00000009044 ENSGALG00000009044 14492 1.458 - - - - - - - 0.709 - 0.749
22. YIPF3 ENSGALG00000041037 6126 1.456 - - - - - - 0.707 - - 0.749 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
23. BRD1 ENSGALG00000029379 6047 1.437 - - 0.715 - - - - - - 0.722 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
24. HOTAIRM1 HOTAIRM1 4335 1.427 - - - - - - 0.721 - - 0.706
25. ANKHD1 ENSGALG00000001099 10103 1.415 - - - - - - 0.708 - - 0.707 ankyrin repeat and KH domain containing 1 [Source:NCBI gene;Acc:416143]
26. COX7A2 ENSGALG00000015906 62347 1.414 - - - - - - - 0.714 - 0.700 cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
27. PI4KA ENSGALG00000040756 3973 0.996 - - - - - - - 0.996 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
28. MFN1 ENSGALG00000041873 4170 0.995 - - - - - - - 0.995 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
29. HCFC2 ENSGALG00000029616 4525 0.994 - - - - - - - 0.994 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
30. LONP1 ENSGALG00000040492 7133 0.994 - - - - - - - 0.994 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
31. PYURF ENSGALG00000039869 5657 0.994 - - - - - - - 0.994 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
32. HIC2 ENSGALG00000033416 4051 0.993 - - - - - - - 0.993 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
33. DARS ENSGALG00000012355 2887 0.993 - - - - - - - 0.993 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
34. TRNT1 ENSGALG00000017368 11932 0.993 - - - - - - - 0.993 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
35. CDC123 ENSGALG00000014038 1418 0.993 - - - - - - - 0.993 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
36. DACH1 ENSGALG00000037015 5648 0.993 - - - - - - - 0.993 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
37. ENSGALG00000004643 ENSGALG00000004643 2297 0.992 - - - - - - - 0.992 - -
38. WDR47 ENSGALG00000002129 2624 0.992 - - - - - - - 0.992 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
39. SDAD1 ENSGALG00000011543 5191 0.992 - - - - - - - 0.992 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
40. SOCS5 ENSGALG00000010016 1134 0.992 - - - - - - - 0.992 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
41. RFWD3 2315 0.992 - - - - - - - 0.992 - - ring finger and WD repeat domain 3
42. NUDCD1 ENSGALG00000040879 2965 0.992 - - - - - - - 0.992 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
43. RRAGD ENSGALG00000026971 2429 0.992 - - - - - - - 0.992 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
44. C3H6ORF120 C3H6ORF120 2712 0.992 - - - - - - - 0.992 - -
45. ACTR10 ENSGALG00000012041 2752 0.992 - - - - - - - 0.992 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
46. TMEFF1 ENSGALG00000013212 4222 0.992 - - - - - - - 0.992 - - transmembrane protein with EGF-like and two follistatin-like domains 1
47. PHF12 ENSGALG00000031368 1960 0.991 - - - - - - - 0.991 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
48. DERL3 ENSGALG00000005994 1499 0.991 - - - - - - - 0.991 - - derlin 3 [Source:NCBI gene;Acc:416934]
49. USP3 ENSGALG00000003427 1236 0.991 - - - - - - - 0.991 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
50. TOLLIP ENSGALG00000006697 917 0.991 - - - - - - - 0.991 - - toll interacting protein [Source:NCBI gene;Acc:423099]
51. RP2 ENSGALG00000016728 3291 0.991 - - - - - - - 0.991 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
52. C10orf76 C10orf76 2424 0.99 - - - - - - - 0.990 - -
53. OLFM1 ENSGALG00000002515 1841 0.99 - - - - - - - 0.990 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
54. FAM114A1 ENSGALG00000013583 736 0.99 - - - - - - - 0.990 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
55. PDZD11 ENSGALG00000004198 11484 0.99 - - - - - - - 0.990 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
56. SLC43A3 ENSGALG00000020479 1332 0.99 - - - - - - - 0.990 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
57. DCAF7 ENSGALG00000000510 8681 0.99 - - - - - - - 0.990 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
58. DIP2C ENSGALG00000006652 1858 0.99 - - - - - - - 0.990 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
59. SNAI1 ENSGALG00000008018 3930 0.99 - - - - - - - 0.990 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
60. RGMA ENSGALG00000039173 12874 0.99 - - - - - - - 0.990 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
61. CUTC ENSGALG00000037283 2530 0.99 - - - - - - - 0.990 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
62. LYPLA2 ENSGALG00000004002 3939 0.99 - - - - - - - 0.990 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
63. ACL ACL 1813 0.99 - - - - - - - 0.990 - -
64. DTD2 ENSGALG00000009978 4322 0.988 - - - - - - - 0.988 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
65. ST5 6869 0.988 - - - - - - - 0.988 - - suppression of tumorigenicity 5, transcript variant X1
66. USP9X ENSGALG00000016236 9419 0.987 - - - - - - - 0.987 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
67. ZNF639 ENSGALG00000005944 6387 0.987 - - - - - - - 0.987 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
68. ABL ABL 9532 0.987 - - - - - - - 0.987 - -
69. ZC3H6 ENSGALG00000008269 10353 0.986 - - - - - - - 0.986 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
70. TP53INP1 ENSGALG00000041353 6890 0.986 - - - - - - - 0.986 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
71. DYRK2 ENSGALG00000009901 3141 0.985 - - - - - - - 0.985 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
72. PPP3CB ENSGALG00000005243 8794 0.985 - - - - - - - 0.985 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
73. COMMD7 ENSGALG00000006630 11491 0.983 - - - - - - - 0.983 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
74. PITX3 ENSGALG00000005613 1518 0.981 - - - - - - - 0.981 - - paired like homeodomain 3
75. DHFR ENSGALG00000026757 18478 0.981 - - - - - - - 0.981 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
76. GALNT1 ENSGALG00000013135 13583 0.978 - - - - - - - 0.978 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
77. TFIP11 ENSGALG00000005623 7784 0.963 - - - - - - - 0.963 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
78. RGL1 ENSGALG00000004728 3004 0.96 - - - - - - - 0.960 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
79. SAMHD1 ENSGALG00000001231 5218 0.959 - - - - - - - 0.959 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
80. GPS1 ENSGALG00000002827 8433 0.952 - - - - - - - 0.952 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
81. APAF1 ENSGALG00000011531 3102 0.952 - - - - - - - 0.952 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
82. TMEM120B ENSGALG00000004254 2819 0.951 - - - - - - - 0.951 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
83. PPP2R5C ENSGALG00000029996 5759 0.948 - - - - - - - 0.948 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
84. GPATCH1 ENSGALG00000004839 6455 0.942 - - - - - - - 0.942 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
85. RPF1 ENSGALG00000008796 9809 0.937 - - - - - - - 0.937 - - ribosome production factor 1 homolog
86. PKP2 ENSGALG00000012913 2547 0.935 - - - - - - - 0.935 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
87. CIAPIN1 ENSGALG00000029268 23036 0.935 - - - - - - - 0.935 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
88. COG7 ENSGALG00000006156 4072 0.934 - - - - - - - 0.934 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
89. PIH1D3 ENSGALG00000004870 1365 0.928 - - 0.928 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
90. PTPLB PTPLB 13107 0.92 - - - - - - - 0.920 - -
91. MT-ND4L MT-ND4L 12537 0.912 - - - - - - - 0.912 - -
92. PHF2 ENSGALG00000039208 2003 0.904 - - 0.904 - - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
93. EPB41 ENSGALG00000001329 787 0.904 - - 0.904 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
94. MED9 ENSGALG00000031214 10779 0.899 - - - - - - - 0.899 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
95. BCCIP ENSGALG00000006617 13291 0.898 - - 0.898 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
96. BMP2 ENSGALG00000029301 379 0.897 - - 0.897 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
97. C8H1ORF52 C8H1ORF52 118 0.895 - - 0.895 - - - - - - -
98. ZEB2 ENSGALG00000040465 315 0.894 - - 0.894 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
99. DAPK3 ENSGALG00000037733 6215 0.892 - - 0.892 - - - - - - - death-associated protein kinase 3, transcript variant X2
100. GBAS 18453 0.892 - - 0.892 - - - - - - - glioblastoma amplified sequence

There are 641 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA