Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYNDIG1

Gene Name Gene ID Reads Annotation
SYNDIG1 ENSDARG00000100751 165 synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]










Genes with expression patterns similar to SYNDIG1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYNDIG1 ENSDARG00000100751 165 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
2. slc1a3b ENSDARG00000043148 431 2.918 - 1.000 - - - 0.935 - 0.983 - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
3. tbr1a ENSDARG00000076259 341 2.435 0.831 0.712 - - - - - 0.892 - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
4. PPP2R5B ENSDARG00000054931 213 1.949 - 1.000 - - - 0.949 - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
5. GRIN3A ENSDARG00000075802 27 1.935 - 1.000 - - - 0.935 - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
6. DBNDD1 DBNDD1 43 1.925 0.925 1.000 - - - - - - -
7. sult4a1 ENSDARG00000101967 205 1.923 - - - - - 0.925 - 0.998 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
8. cadpsb ENSDARG00000070567 458 1.9 - - - - - 0.913 - 0.987 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
9. APEX2 ENSDARG00000008472 7 1.88 0.880 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
10. cspg5b ENSDARG00000099793 67 1.851 - 1.000 - - - 0.851 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
11. atp6v0a1b ENSDARG00000015174 1052 1.85 - - - - - 0.902 - 0.948 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
12. ELFN1 ELFN1 59 1.844 0.952 - - - - 0.892 - - -
13. pcdh8 ENSDARG00000006467 317 1.835 - 1.000 - - - 0.835 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
14. zgc:193690 34 1.834 0.834 1.000 - - - - - - - zgc:193690
15. lhx1a ENSDARG00000014018 958 1.833 - - - - - 0.848 - 0.985 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
16. b3gat2 ENSDARG00000030733 348 1.819 - 1.000 - - - 0.819 - - - beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
17. gria4a ENSDARG00000037496 88 1.807 - 1.000 - - - 0.807 - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
18. celf4 ENSDARG00000070045 1537 1.794 - 0.866 - - - 0.928 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
19. SLC28A2 SLC28A2 21 1.79 0.880 0.910 - - - - - - -
20. rbm4.1 ENSDARG00000036386 625 1.789 - - - - - 0.800 - 0.989 - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
21. si:dkey-77f17.1 si:dkey-77f17.1 83 1.788 - 1.000 - - - 0.788 - - -
22. BX571853.2 ENSDARG00000110441 21 1.788 - 1.000 - - - 0.788 - - -
23. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1.783 - 1.000 - - - 0.783 - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
24. si:ch211-195i24.1 si:ch211-195i24.1 10 1.772 - 1.000 - - - 0.772 - - -
25. si:dkeyp-82a1.2 ENSDARG00000094192 2 1.772 - 1.000 - - - 0.772 - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
26. SPOCK1 ENSDARG00000074644 794 1.768 - 0.850 - - - 0.918 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
27. vgf ENSDARG00000105529 247 1.756 - 0.906 - - - 0.850 - - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
28. CABZ01112331.1 CABZ01112331.1 9 1.753 - 1.000 - - 0.753 - - - -
29. CR749741.2 CR749741.2 15 1.753 0.880 - - - - 0.873 - - -
30. olfm1b ENSDARG00000014053 1392 1.745 - - - - - 0.766 - 0.979 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
31. PEG3_19 PEG3_19 29 1.744 0.744 1.000 - - - - - - -
32. DNER ENSDARG00000061031 123 1.731 - 1.000 - - - 0.731 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
33. ek1 ENSDARG00000020080 742 1.73 - 0.738 - - - - - 0.992 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
34. ncam2 ENSDARG00000017466 175 1.726 - 1.000 - - - 0.726 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
35. CACNA1H CACNA1H 34 1.724 0.900 - - - 0.824 - - - -
36. si:ch211-254n4.1 si:ch211-254n4.1 36 1.717 - - 0.846 - - 0.871 - - -
37. si:ch1073-185p12.2 ENSDARG00000100199 7 1.704 0.704 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
38. lrrtm1 ENSDARG00000052713 1041 1.701 - - - - - 0.727 - 0.974 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
39. znf804a ENSDARG00000027079 121 1.692 - - - - - 0.946 0.746 - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
40. SNORA42 SNORA42 24 1.691 0.900 - - - - 0.791 - - -
41. fermt3b ENSDARG00000030938 17 1.685 0.880 0.805 - - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
42. nr1d4a ENSDARG00000031161 24 1.68 - - - - 0.908 0.772 - - - nuclear receptor subfamily 1, group D, member 4a [Source:ZFIN;Acc:ZDB-GENE-080403-5]
43. kcnk9 ENSDARG00000104563 92 1.67 - - - - - 0.823 0.847 - - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
44. tmeff1b ENSDARG00000056740 11253 1.669 - - - - - 0.887 - 0.782 - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
45. pax6a ENSDARG00000103379 3061 1.654 - - - - 0.763 0.891 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
46. si:dkey-284p5.3 ENSDARG00000095638 4 1.652 0.880 - - - - 0.772 - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
47. dync1i1 ENSDARG00000060948 554 1.637 - 0.720 - - - 0.917 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
48. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.625 - - - - - 0.799 - 0.826 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
49. BX511266.1 BX511266.1 21 1.622 - - - - 0.850 0.772 - - -
50. crygm2d14 ENSDARG00000087301 66 1.611 - - - - 0.839 0.772 - - - crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
51. kirrel3l ENSDARG00000104665 499 1.601 0.825 - - - - 0.776 - - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
52. wdr47b ENSDARG00000099757 93 1.595 - - 0.740 - - 0.855 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
53. si:ch73-338a16.3 ENSDARG00000101159 18 1.591 0.757 0.834 - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
54. CBFA2T3 ENSDARG00000079012 6799 1.589 - - - - - 0.864 - 0.725 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
55. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.582 - - - - - 0.767 - 0.815 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
56. nsmfa ENSDARG00000060025 70 1.581 - - - - - 0.865 0.716 - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
57. zgc:162184 ENSDARG00000077217 47 1.578 - 0.729 0.849 - - - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
58. EML5 ENSDARG00000053517 74 1.577 - 0.807 - - - 0.770 - - - echinoderm microtubule associated protein like 5 [Source:HGNC Symbol;Acc:HGNC:18197]
59. insm1b ENSDARG00000053301 2032 1.575 - - - - - 0.769 - 0.806 - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
60. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.573 - - 0.730 - - 0.843 - - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
61. st6galnac5a ENSDARG00000039220 76 1.57 - - 0.822 - - - 0.748 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
62. CDH12 CDH12 44 1.565 - 0.747 - - - 0.818 - - -
63. ubxn10 ENSDARG00000052535 24 1.563 - 0.747 0.816 - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
64. rab42a ENSDARG00000034215 692 1.563 - 0.712 - - - 0.851 - - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
65. atp2b1b ENSDARG00000007788 56 1.559 - - 0.825 - 0.734 - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
66. CABZ01029822.1 ENSDARG00000086931 1654 1.54 - - - - - 0.808 0.732 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
67. EOGT ENSDARG00000022853 366 1.536 - - - - - 0.778 0.758 - - EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [Source:ZFIN;Acc:ZDB-GENE-120813-8]
68. ebf1a 733 1.535 0.761 - - - - 0.774 - - - early B-cell factor 1a, transcript variant X4
69. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1.533 - - 0.745 - - 0.788 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
70. zgc:77112 ENSDARG00000015657 24 1.532 - - 0.760 - - 0.772 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
71. hoxc4a ENSDARG00000070338 1382 1.53 - - - - - 0.760 - 0.770 - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
72. FBLN7 ENSDARG00000089519 4 1.525 - - - - - 0.772 0.753 - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
73. wu:fe11b02_1 wu:fe11b02_1 7 1.525 - - - - 0.753 0.772 - - -
74. C13H20orf194 C13H20orf194 580 1.522 0.764 - - - - 0.758 - - -
75. rasgrp3 ENSDARG00000077864, ENSDARG00000109559, ENSDARG00000116768 111 1.514 - 0.805 0.709 - - - - - - RAS guanyl releasing protein 3 (calcium and DAG-regulated) [Source:ZFIN;Acc:ZDB-GENE-070424-82]
76. purg ENSDARG00000099187, ENSDARG00000114450 33 1.501 - 0.729 - - - 0.772 - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
77. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.5 - - - - 0.735 0.765 - - -
78. CASKIN1 ENSDARG00000046107 201 1.497 - - 0.730 - - 0.767 - - - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
79. si:ch211-274p24.3 si:ch211-274p24.3 72 1.495 - - - - 0.723 0.772 - - -
80. CR678040.1 CR678040.1 117 1.493 - 0.721 - - - 0.772 - - -
81. si:ch211-152c2.3 ENSDARG00000045898 3448 1.488 - 0.751 - - 0.737 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
82. anapc2 ENSDARG00000105035 239 1.481 - - 0.766 - - - 0.715 - - anaphase promoting complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-081104-256]
83. map7d2a ENSDARG00000068480 513 1.468 - 0.729 - - - 0.739 - - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
84. GABRG1 ENSDARG00000101995 201 1.455 - 0.712 - - - 0.743 - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
85. UNC13A UNC13A 36 1.446 - 0.721 - - 0.725 - - - -
86. FP236162.1 FP236162.1 2 1 - 1.000 - - - - - - -
87. ZNF337_23 ZNF337_23 39 1 - 1.000 - - - - - - -
88. GPR82 GPR82 127 1 - 1.000 - - - - - - -
89. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
90. CCNO 21 1 - 1.000 - - - - - - - cyclin O
91. CR753817.1 ENSDARG00000110927 26 1 - 1.000 - - - - - - -
92. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
93. BIN3 ENSDARG00000099651 5 1 - 1.000 - - - - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
94. CU928220.1 CU928220.1 146 1 - 1.000 - - - - - - -
95. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
96. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
97. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
98. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
99. polg ENSDARG00000060951 33 1 - 1.000 - - - - - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
100. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -

There are 1887 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA