Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYNC

Gene Name Gene ID Reads Annotation
SYNC ENSGALG00000003529 389 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]











Genes with expression patterns similar to SYNC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYNC ENSGALG00000003529 389 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
2. TTC28 ENSGALG00000005676 36 1.685 - - - - - 0.780 - - - 0.905 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
3. TMEM27 ENSGALG00000029168 36 1.523 - - 0.744 - - - 0.779 - - - transmembrane protein 27, transcript variant X3
4. RXFP1 ENSGALG00000009429 10 0.93 - - - - - - - - - 0.930 relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
5. ENSGALG00000007997 ENSGALG00000007997 721 0.915 - - - - - - - - - 0.915
6. RAP2C ENSGALG00000006061 11 0.914 - - - - - - - - - 0.914 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
7. PITPNM2 ENSGALG00000003645 17 0.914 - - - - - - - - - 0.914 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
8. SLC39A8 ENSGALG00000012298 9 0.914 - - - - - - - - - 0.914 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
9. ENSGALG00000000188 ENSGALG00000000188 11 0.914 - - - - - - - - - 0.914
10. LOC420160 ENSGALG00000004252 188 0.914 - - - - - - - - - 0.914 cathepsin L1-like, transcript variant X3
11. PCNXL4 PCNXL4 58 0.912 - - - - - - - - - 0.912
12. RANBP3L 19 0.911 - - - - - - - - - 0.911 RAN binding protein 3 like, transcript variant X2
13. CPN2 ENSGALG00000045776 18 0.908 - - - - - - - - - 0.908 carboxypeptidase N subunit 2
14. LRRC1 ENSGALG00000016304 21 0.906 - - - - - - - - - 0.906 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
15. KIAA1045 KIAA1045 23 0.906 - - - - - - - - - 0.906
16. SRGAP2 ENSGALG00000000816 97 0.906 - - - - - - - - - 0.906 SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
17. FAM105A ENSGALG00000012965 6 0.904 - - - - - - - - - 0.904 family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
18. LOC421584 ENSGALG00000011579 8 0.898 - - - - - - - - - 0.898 solute carrier family 22 member 2-like
19. PLCXD1 ENSGALG00000016721 289 0.894 - - - - - - - - - 0.894 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
20. TBC1D24 ENSGALG00000009217 43 0.892 - - - - - - - - - 0.892 TBC1 domain family member 24 [Source:NCBI gene;Acc:100859828]
21. LRRC2 ENSGALG00000013634 69 0.889 - - - - - - - - - 0.889 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
22. CORO7 ENSGALG00000038325 580 0.887 - - - - - - - - - 0.887 coronin 7 [Source:NCBI gene;Acc:416670]
23. PPP2R3C ENSGALG00000010052 637 0.881 - - - - - - - - - 0.881 protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
24. SHCBP1 ENSGALG00000004444 59 0.881 - - - - - - - - - 0.881 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
25. ZNF814 ZNF814 13 0.881 - - - - - - - - - 0.881
26. PPP1R15B ENSGALG00000000611 412 0.878 - - - - - - - - - 0.878 protein phosphatase 1 regulatory subunit 15B [Source:HGNC Symbol;Acc:HGNC:14951]
27. NUDT15 ENSGALG00000016994 210 0.877 - - - - - - - - - 0.877 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
28. YTHDF1 ENSGALG00000005745 135 0.877 - - - - - - - - - 0.877 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
29. SLC6A13 ENSGALG00000012985 194 0.874 - - - - - - - - - 0.874 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
30. SLC37A2 ENSGALG00000035842 1183 0.87 - - - - - - - - - 0.870 solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
31. ICMT ENSGALG00000024053 10 0.867 - - 0.867 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
32. CENPA ENSGALG00000037735 171 0.863 - - - - - - - - - 0.863 centromere protein A [Source:NCBI gene;Acc:100113359]
33. CYP3A4 ENSGALG00000004436 75 0.862 - - - - - - - - - 0.862 Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
34. DNAJC16 ENSGALG00000032832 750 0.861 - - - - - - - - - 0.861 DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
35. CHIC1 ENSGALG00000040956 1177 0.859 - - - - - - - - - 0.859 cysteine rich hydrophobic domain 1 [Source:NCBI gene;Acc:422318]
36. CENPQ ENSGALG00000016692 293 0.858 - - 0.858 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
37. FADD ENSGALG00000007625 142 0.857 - - 0.857 - - - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
38. BRD8 ENSGALG00000037646 100 0.856 - - - - - - - - 0.856 - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
39. CACNA1D ENSGALG00000005332 34 0.856 - - 0.856 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
40. GALT ENSGALG00000026195 2002 0.855 - - - - - - - - - 0.855 galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
41. ANKRD28 ENSGALG00000011226 160 0.854 - - - - - - - - - 0.854 ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
42. URAH ENSGALG00000000549 484 0.853 - - - - - - - - - 0.853 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
43. OIT3 ENSGALG00000004345 4886 0.852 - - - - - - - - - 0.852 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
44. FHOD1 ENSGALG00000002198 426 0.848 - - - - - - - - - 0.848 formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
45. VWA1 ENSGALG00000001527 79 0.847 - - - - - - - - - 0.847 von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
46. UIMC1 ENSGALG00000001158 22 0.844 - - 0.844 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
47. CAPN6 ENSGALG00000008006 16 0.843 - - 0.843 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
48. TPTE2 ENSGALG00000017031 29 0.843 - - 0.843 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
49. ZP2 ENSGALG00000002428 10 0.842 - - 0.842 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
50. GATA4 ENSGALG00000016662 6 0.841 - - 0.841 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
51. VEPH1 ENSGALG00000009682 51 0.841 - - 0.841 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
52. DENND6B ENSGALG00000043771 22 0.841 - - 0.841 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
53. SLC9A9 ENSGALG00000002374 179 0.84 - - - - - - - - - 0.840 solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
54. SP2 ENSGALG00000000233 43 0.838 - - 0.838 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
55. CABP2 ENSGALG00000037497 329 0.838 - - - - - - - - - 0.838 calcium binding protein 2 [Source:NCBI gene;Acc:429967]
56. PHF10 ENSGALG00000011192 361 0.837 - - - - - - - - - 0.837 PHD finger protein 10 [Source:HGNC Symbol;Acc:HGNC:18250]
57. ENSGALG00000000789 ENSGALG00000000789 24 0.836 - - - - - - - - - 0.836
58. LY86 ENSGALG00000012801 865 0.836 - - - - - - - - - 0.836 lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
59. SPTY2D1 ENSGALG00000006355 994 0.834 - - - - - - - - - 0.834 SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
60. EX-FABP EX-FABP 516 0.833 - - - - - - - - 0.833 -
61. ARHGEF18 ENSGALG00000003572 224 0.833 - - 0.833 - - - - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
62. KIAA1024L ENSGALG00000027692 20 0.831 - - - - - - - - - 0.831 KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
63. DLEC1 ENSGALG00000005826 23 0.83 - - 0.830 - - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
64. PLA1A ENSGALG00000014997 152 0.829 - - 0.829 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
65. MXD4 ENSGALG00000015688 1472 0.829 - - 0.829 - - - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
66. TRAF3IP3 ENSGALG00000001373 11 0.829 - - 0.829 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
67. EIF4G1 ENSGALG00000008520 1241 0.826 - - - - - - - - - 0.826 eukaryotic translation initiation factor 4 gamma 1 [Source:HGNC Symbol;Acc:HGNC:3296]
68. TRPC6 ENSGALG00000029416 281 0.826 - - - - - - - - - 0.826 transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
69. C1orf168 C1orf168 98 0.825 - - 0.825 - - - - - - -
70. CARD8 ENSGALG00000007698 45 0.825 - - - - - - - - - 0.825 caspase recruitment domain family, member 8
71. STX19 ENSGALG00000015413 28 0.824 - - 0.824 - - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
72. SCN4B ENSGALG00000007409 22 0.824 - - 0.824 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
73. PLEKHA1 ENSGALG00000034548 34 0.824 - - 0.824 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
74. VPS13C ENSGALG00000003705 1331 0.823 - - - - - - - - 0.823 - vacuolar protein sorting 13 homolog C [Source:HGNC Symbol;Acc:HGNC:23594]
75. FUK ENSGALG00000002648 9 0.823 - - 0.823 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
76. MKNK1 ENSGALG00000010440 196 0.823 - - - - - - - - - 0.823 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
77. ENSGALG00000014291 ENSGALG00000014291 29 0.822 - - - - - - - - - 0.822
78. PTPRQ ENSGALG00000010935 626 0.822 - - - - - - - - - 0.822 protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
79. U2_1 U2_1 13 0.82 - - - - - - - - - 0.820
80. KNDC1 ENSGALG00000007007 31 0.82 - - 0.820 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
81. KCTD18 ENSGALG00000008155 26 0.819 - - - - - - - - - 0.819 potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:HGNC:26446]
82. PHLPP1 ENSGALG00000012888 398 0.819 - - - - - - - - 0.819 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
83. SLC4A4 ENSGALG00000031105 534 0.818 - - - - - - - - 0.818 - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
84. PRKAA1 ENSGALG00000014832 547 0.817 - - - - - - - - - 0.817 protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
85. RHOBTB1 ENSGALG00000003073 56 0.817 - - - - - - - - - 0.817 Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
86. FAM107B ENSGALG00000033226 1539 0.816 - - 0.816 - - - - - - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
87. MAP1LC3A ENSGALG00000038721 2230 0.816 - - - - - - - - - 0.816 microtubule associated protein 1 light chain 3 alpha
88. LIMS2 ENSGALG00000001995 41 0.812 - - - - - - 0.812 - - - LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
89. PPM1K ENSGALG00000011266 111 0.812 - - - - - - - - - 0.812 protein phosphatase, Mg2+/Mn2+ dependent 1K [Source:HGNC Symbol;Acc:HGNC:25415]
90. ENSGALG00000021386 ENSGALG00000021386 29 0.81 - - 0.810 - - - - - - -
91. SELM SELM 6366 0.81 - - - - - - - - - 0.810
92. FLT1 ENSGALG00000017091 198 0.809 - - - - - - - - - 0.809 fms related tyrosine kinase 1 [Source:NCBI gene;Acc:374100]
93. RELT 1138 0.808 - - - - - - - - - 0.808 RELT tumor necrosis factor receptor, transcript variant X4
94. ST6GALNAC4 ENSGALG00000005063 1056 0.806 - - - - - - - - - 0.806 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
95. TIRAP ENSGALG00000040224 2578 0.806 - - - - - - - - - 0.806 TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
96. LRIG1 ENSGALG00000007483 19 0.806 - - 0.806 - - - - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
97. ABCC13 ENSGALG00000015675 66 0.805 - - 0.805 - - - - - - - ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
98. CDCP1 ENSGALG00000040447 47 0.805 - - 0.805 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
99. SPSB4 ENSGALG00000032053 11 0.803 - - 0.803 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 4
100. ENSGALG00000008543 ENSGALG00000008543 491 0.801 - - - - - - - - - 0.801

There are 244 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA