Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYDE2

Gene Name Gene ID Reads Annotation
SYDE2 ENSGALG00000038776 192 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]











Genes with expression patterns similar to SYDE2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYDE2 ENSGALG00000038776 192 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
2. SERPINB14 SERPINB14 196 0.929 - - - - - - - - - 0.929
3. COL23A1 ENSGALG00000006708 181 0.928 - - - - - - - - - 0.928 collagen type XXIII alpha 1 chain, transcript variant X1
4. UTS2RL ENSGALG00000012419 118 0.923 - - - - - - - - - 0.923 urotensin-2 receptor-like
5. ENTPD5 ENSGALG00000010202 69 0.923 - - - - - - - - - 0.923 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
6. LYG2 ENSGALG00000016761 7 0.917 - - - - - - - - - 0.917 lysozyme g2 [Source:NCBI gene;Acc:395708]
7. COL25A1 ENSGALG00000039411 5 0.917 - - - - - - - - - 0.917 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
8. BF1 ENSGALG00000033932 18 0.917 - - - - - - - - - 0.917 MHC BF1 class I [Source:NCBI gene;Acc:693260]
9. ENSGALG00000026222 ENSGALG00000026222 3 0.917 - - - - - - - - - 0.917
10. VIPR1 ENSGALG00000005259 3 0.917 - - - - - - - - - 0.917 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
11. CUBN ENSGALG00000008704 21 0.917 - - - - - - - - - 0.917 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
12. XKRX ENSGALG00000006637 13 0.917 - - - - - - - - - 0.917 XK related, X-linked, transcript variant X4
13. SNORA53 SNORA53 6 0.917 - - - - - - - - - 0.917
14. CKV6.3 CKV6.3 13 0.917 - - - - - - - - - 0.917
15. SORL1 ENSGALG00000006598 39 0.914 - - - - - - - - - 0.914 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
16. PIK3C2G ENSGALG00000013117 53 0.908 - - - - - - - - - 0.908 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
17. MANSC4 32 0.906 - - - - - - - - - 0.906 MANSC domain containing 4, transcript variant X1
18. FAM126B ENSGALG00000020869 19 0.901 - - - - - - - - - 0.901 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
19. TC2N ENSGALG00000010738 92 0.895 - - - - - - - - - 0.895 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
20. ARHGAP15 ENSGALG00000012421 58 0.887 - - - - - - - - - 0.887 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
21. GABRB4 GABRB4 12 0.881 - - - - - - - - - 0.881
22. MYH1G ENSGALG00000028612 7 0.88 - - - - - - - - - 0.880 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
23. AREG ENSGALG00000010866 16 0.879 - - - - - - - - - 0.879 amphiregulin [Source:NCBI gene;Acc:428752]
24. KIAA1549L ENSGALG00000012020 33 0.876 - - - - - - - - - 0.876 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
25. IKZF1 ENSGALG00000013086 58 0.873 - - - - - - - - - 0.873 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
26. PEAK1 ENSGALG00000002759 39 0.87 - - - - - - - - - 0.870 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
27. ZFAT ENSGALG00000037698 34 0.868 - - - - - - - - - 0.868 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
28. SIM1 ENSGALG00000015466 111 0.865 - - - - - - - - - 0.865 SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
29. EPG5 ENSGALG00000036259 71 0.863 - - - - - - - - - 0.863 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
30. FMN1 ENSGALG00000009723 100 0.863 - - - - - - - - - 0.863 formin 1 [Source:NCBI gene;Acc:386747]
31. CCNI2 ENSGALG00000023812 21 0.856 - - - - - - - - - 0.856 cyclin I family member 2, transcript variant X2
32. IL34 ENSGALG00000028466 270 0.853 - - - - - - - - - 0.853 interleukin 34
33. TMTC1 ENSGALG00000012956 160 0.843 - - - - - - - - - 0.843 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
34. CHSY3 ENSGALG00000026899 80 0.839 - - - - - - - - - 0.839 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
35. MUC5B MUC5B 62 0.839 - - - - - - - - - 0.839
36. CDKL5 ENSGALG00000016529 26 0.839 - - - - - - - - - 0.839 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
37. CCDC147 CCDC147 53 0.838 - - - - - - - - - 0.838
38. ENSGALG00000001734 ENSGALG00000001734 408 0.835 - - - - - - - - - 0.835
39. FRRS1 ENSGALG00000005418 332 0.835 - - - - - - - - - 0.835 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
40. B3GNTL1 ENSGALG00000001433 22 0.835 - - 0.835 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
41. CFAP99 ENSGALG00000015685 32 0.829 - - - - - - - - - 0.829 cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
42. NDST4 ENSGALG00000012015 43 0.824 - - - - - - - - - 0.824 N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
43. LSM14B ENSGALG00000005125 31 0.823 - - - - - - - - - 0.823 LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
44. RAB11FIP1 41 0.822 - - - - - - - - - 0.822 RAB11 family interacting protein 1, transcript variant X2
45. RAPSN ENSGALG00000008100 53 0.821 - - - - - - - - - 0.821 receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
46. CCDC3 ENSGALG00000030140 258 0.821 - - - - - - - - - 0.821 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
47. SNORA17 SNORA17 39 0.821 - - - - - - - - - 0.821
48. ZBTB6 ENSGALG00000021570 15 0.82 - - - - - - - - - 0.820 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
49. FGF7 ENSGALG00000028158 189 0.819 - - - - - - - - - 0.819 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
50. GABRG4 GABRG4 16 0.817 - - - - - - - - - 0.817
51. GABRD ENSGALG00000001282 8 0.815 - - - - - - - - - 0.815 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
52. DNAH7 ENSGALG00000007841 32 0.814 - - 0.814 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
53. SUSD4 ENSGALG00000009388 48 0.812 - - 0.812 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
54. CEP44 ENSGALG00000020201 1060 0.81 - - 0.810 - - - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
55. WFIKKN1 ENSGALG00000000044 19 0.809 - - - - - - - - - 0.809 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30912]
56. LRRC56 ENSGALG00000041955 16 0.809 - - 0.809 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
57. LRBA ENSGALG00000010061 67 0.808 - - - - - - - - - 0.808 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
58. SKTMOD SKTMOD 207 0.807 - - - - - - - - - 0.807
59. ENSGALG00000000407 ENSGALG00000000407 32 0.807 - - 0.807 - - - - - - -
60. FAM171A1 ENSGALG00000008764 349 0.806 - - 0.806 - - - - - - - family with sequence similarity 171 member A1 [Source:HGNC Symbol;Acc:HGNC:23522]
61. RNF19B ENSGALG00000039716 662 0.805 - - - - - - - - - 0.805 ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
62. ROPN1L ENSGALG00000013006 97 0.805 - - 0.805 - - - - - - - rhophilin associated tail protein 1 like [Source:HGNC Symbol;Acc:HGNC:24060]
63. ANKRD42 8 0.804 - - 0.804 - - - - - - - ankyrin repeat domain 42
64. SPTSSBL ENSGALG00000026131 70 0.804 - - 0.804 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
65. LHX6 ENSGALG00000001347 7 0.804 - - 0.804 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
66. AQP3 ENSGALG00000002452 97 0.801 - - - - - - - - - 0.801 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
67. IKBIP ENSGALG00000026284 31 0.799 - - 0.799 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
68. E2F3 ENSGALG00000012680 21 0.799 - - - - - - - - - 0.799 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
69. ENSGALG00000005076 ENSGALG00000005076 286 0.799 - - 0.799 - - - - - - -
70. PLAG1 ENSGALG00000015407 17 0.799 - - 0.799 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
71. ENSGALG00000026975 ENSGALG00000026975 8 0.798 - - 0.798 - - - - - - -
72. PSMD4 ENSGALG00000028505 16 0.798 - - 0.798 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
73. TMEM230 ENSGALG00000036876 55 0.796 - - 0.796 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
74. IL4RA IL4RA 1237 0.796 - - 0.796 - - - - - - -
75. HOXA9 ENSGALG00000028983 9298 0.794 - - 0.794 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
76. BRINP3 ENSGALG00000033407 40 0.793 - - - - - - - - - 0.793 BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
77. CCDC39 ENSGALG00000021855 23 0.793 - - - - - - - - - 0.793 coiled-coil domain containing 39
78. CEP250 ENSGALG00000026151 163 0.792 - - - - - - - - - 0.792 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
79. ARHGEF4 ENSGALG00000002193 558 0.792 - - 0.792 - - - - - - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
80. CARD9 ENSGALG00000001889 83 0.792 - - - - - - - - - 0.792 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
81. FAF1 ENSGALG00000010536 1522 0.792 - - 0.792 - - - - - - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
82. ENSGALG00000006278 ENSGALG00000006278 202 0.791 - - 0.791 - - - - - - -
83. SATB2 ENSGALG00000008135 347 0.791 - - 0.791 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
84. KLHL30 ENSGALG00000006260 32 0.791 - - - - - - - - - 0.791 kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
85. TPST2 ENSGALG00000005626 945 0.79 - - 0.790 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
86. C1orf74 ENSGALG00000001378 39 0.79 - - - - - - - - - 0.790 chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
87. DGKE ENSGALG00000003131 17 0.789 - - - - - - - - - 0.789 diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
88. NT5DC1 ENSGALG00000014964 1540 0.786 - - - - - - - - - 0.786 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21556]
89. CEP250_1 ENSGALG00000026151 23 0.785 - - - - - - - - - 0.785 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
90. FNDC7 ENSGALG00000001983 24 0.785 - - 0.785 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
91. REEP2 ENSGALG00000017365 338 0.784 - - 0.784 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
92. YDJC ENSGALG00000029198 14 0.784 - - 0.784 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
93. IQGAP1 ENSGALG00000030162 1047 0.783 - - 0.783 - - - - - - - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
94. ITGB2 ENSGALG00000007511 46 0.782 - - 0.782 - - - - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
95. DSEL ENSGALG00000042505 92 0.781 - - 0.781 - - - - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
96. NTF3 ENSGALG00000027299 72 0.781 - - - - - - - - - 0.781 neurotrophin 3 [Source:NCBI gene;Acc:428099]
97. LOC417937 ENSGALG00000011717 31 0.78 - - - - - - - - - 0.780 solute carrier family 23 member 1-like, transcript variant X1
98. ENSGALG00000029120 ENSGALG00000029120 73 0.778 - - 0.778 - - - - - - -
99. CLK3 ENSGALG00000001362 2171 0.776 - - 0.776 - - - - - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
100. CYP3A4 ENSGALG00000004436 75 0.773 - - 0.773 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA