Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYDE1

Gene Name Gene ID Reads Annotation
SYDE1 ENSDARG00000077440 4 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]










Genes with expression patterns similar to SYDE1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYDE1 ENSDARG00000077440 4 4 - - 1.000 - 1.000 1.000 - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
2. si:ch211-227e10.2 ENSDARG00000100414 1 2 - - - - 1.000 - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
3. CABZ01033130.1 CABZ01033130.1 5 2 - - - - - 1.000 - - 1.000
4. BX927317.2 ENSDARG00000101263 4 1.949 - - - - 1.000 - - - 0.949
5. BX005234.1 ENSDARG00000097761 3 1.858 - - - - 0.858 - - - 1.000
6. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1.826 - - 0.888 - - 0.938 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
7. BX088525.2 ENSDARG00000117222 11 1.767 - - 0.767 - - - - - 1.000
8. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.735 - - - - 0.821 - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
9. ZDHHC1 ENSDARG00000077546 14 1.728 - - - - - 0.861 - - 0.867 zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
10. U6_14 U6_14 3 1 - - 1.000 - - - - - -
11. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
12. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
13. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
14. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
15. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
16. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
17. si:dkey-49n23.1 ENSDARG00000040920 3 1 - - - - 1.000 - - - - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
18. dkk2 ENSDARG00000076420 553 1 - - - - - 1.000 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
19. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
20. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
21. PATL2 PATL2 10 1 - - - - - 1.000 - - -
22. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
23. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
24. notchl ENSDARG00000088308 28 1 - - - - - 1.000 - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
25. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
26. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
27. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
28. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
29. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - - 1.000
30. zgc:171318 zgc:171318 42 1 - - - - 1.000 - - - -
31. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
32. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1 - - - - - 1.000 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
33. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
34. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
35. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
36. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
37. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
38. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
39. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
40. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
41. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
42. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
43. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
44. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
45. ovca2 ENSDARG00000103748 38 1 - - - - - 1.000 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
46. si:ch211-253b18.3 si:ch211-253b18.3 4 1 - - - - 1.000 - - - -
47. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
48. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1 - - - - - 1.000 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
49. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
50. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
51. U1_21 U1_21 0 1 - - - - 1.000 - - - -
52. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
53. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
54. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
55. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
56. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
57. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1 - - - - - 1.000 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
58. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
59. LEPROT 0 1 - - - - 1.000 - - - - leptin receptor overlapping transcript
60. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
61. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
62. KCNH2 KCNH2 1 1 - - - - - 1.000 - - -
63. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
64. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
65. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
66. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
67. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
68. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
69. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
70. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
71. HMHA1 HMHA1 2 1 - - - - 1.000 - - - -
72. pofut2 ENSDARG00000045175 6 1 - - - - 1.000 - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
73. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
74. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
75. ZC3H7B_1 ZC3H7B_1 0 1 - - - - 1.000 - - - -
76. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
77. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
78. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
79. syngr1b ENSDARG00000103577 3 1 - - - - 1.000 - - - - synaptogyrin 1b [Source:ZFIN;Acc:ZDB-GENE-090624-2]
80. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
81. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
82. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
83. CABZ01016332.1 CABZ01016332.1 5 1 - - - - - 1.000 - - -
84. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
85. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
86. U5_6 U5_6 0 1 - - - - 1.000 - - - -
87. CR847893.4 CR847893.4 2 1 - - - - - 1.000 - - -
88. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
89. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
90. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
91. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
92. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
93. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
94. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
95. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
96. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
97. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
98. U4_1 U4_1 2 1 - - - - 1.000 - - - -
99. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
100. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]

There are 525 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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