Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SYDE1

Gene Name Gene ID Reads Annotation
SYDE1 ENSDARG00000077440 4 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]










Genes with expression patterns similar to SYDE1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYDE1 ENSDARG00000077440 4 4 - - 1.000 - 1.000 1.000 - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
2. CABZ01033130.1 CABZ01033130.1 5 2 - - - - - 1.000 - - 1.000
3. si:ch211-227e10.2 ENSDARG00000100414 1 2 - - - - 1.000 - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
4. BX927317.2 ENSDARG00000101263 4 1.949 - - - - 1.000 - - - 0.949
5. BX005234.1 ENSDARG00000097761 3 1.858 - - - - 0.858 - - - 1.000
6. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1.826 - - 0.888 - - 0.938 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
7. BX088525.2 ENSDARG00000117222 11 1.767 - - 0.767 - - - - - 1.000
8. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.735 - - - - 0.821 - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
9. ZDHHC1 ENSDARG00000077546 14 1.728 - - - - - 0.861 - - 0.867 zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
10. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
11. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
12. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
13. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
14. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
15. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
16. zgc:194189 ENSDARG00000008010 26 1 - - - - 1.000 - - - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
17. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
18. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - - - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
19. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
20. zgc:172253 ENSDARG00000074191 5 1 - - - - 1.000 - - - - zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
21. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
22. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
23. mir30b 4 1 - - - - 1.000 - - - - microRNA 30b
24. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
25. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
26. ftr43 ENSDARG00000076106 2 1 - - - - 1.000 - - - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
27. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
28. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
29. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
30. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
31. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - - - 1.000 - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
32. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
33. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
34. mhc1uma ENSDARG00000039164 16 1 - - - - - 1.000 - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
35. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
36. DPEP1 ENSDARG00000068181 1 1 - - - - - 1.000 - - - dipeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-388]
37. adkb_1 ENSDARG00000095947 109 1 - - - - 1.000 - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
38. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
39. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
40. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
41. zgc:153441 ENSDARG00000054797 9 1 - - - - 1.000 - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
42. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
43. asah2 ENSDARG00000012829 13 1 - - - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
44. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
45. SP5 SP5 8 1 - - - - - - - - 1.000
46. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
47. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
48. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
49. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
50. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
51. ftr73 ENSDARG00000095298 1 1 - - - - 1.000 - - - - finTRIM family, member 73 [Source:ZFIN;Acc:ZDB-GENE-090508-13]
52. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
53. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
54. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
55. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
56. si:dkey-282h22.5 ENSDARG00000092458 7 1 - - 1.000 - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
57. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
58. GIGYF1_2 GIGYF1_2 22 1 - - - - 1.000 - - - -
59. dkk2 ENSDARG00000076420 553 1 - - - - - 1.000 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
60. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
61. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
62. si:ch211-286b5.2 ENSDARG00000096514 6 1 - - - - 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
63. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
64. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
65. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
66. VASH1 ENSDARG00000092716 33 1 - - - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
67. asip asip 2 1 - - - - 1.000 - - - -
68. rhcga ENSDARG00000003203 7 1 - - - - 1.000 - - - - Rh family, C glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-070424-81]
69. U6_14 U6_14 3 1 - - 1.000 - - - - - -
70. si:ch211-14k19.8 ENSDARG00000088975 7 1 - - 1.000 - - - - - - si:ch211-14k19.8 [Source:ZFIN;Acc:ZDB-GENE-051214-4]
71. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
72. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
73. tmem237a ENSDARG00000041735 13 1 - - - - - 1.000 - - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
74. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
75. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
76. TMC2_1 TMC2_1 0 1 - - - - 1.000 - - - -
77. pofut2 ENSDARG00000045175 6 1 - - - - 1.000 - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
78. cryaa ENSDARG00000053502, ENSDARG00000113469 80 1 - - - - - 1.000 - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
79. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
80. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
81. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
82. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
83. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
84. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
85. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
86. U5_6 U5_6 0 1 - - - - 1.000 - - - -
87. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
88. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
89. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
90. rhd ENSDARG00000002194 269 1 - - - - - 1.000 - - - Rh blood group, D antigen [Source:ZFIN;Acc:ZDB-GENE-051213-1]
91. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - - 1.000 - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
92. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
93. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
94. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
95. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
96. GP9 ENSDARG00000090638 53 1 - - - - - 1.000 - - - glycoprotein IX (platelet) [Source:ZFIN;Acc:ZDB-GENE-090313-5]
97. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
98. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
99. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
100. KCNH2 KCNH2 1 1 - - - - - 1.000 - - -

There are 525 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA