Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYDE1

Gene Name Gene ID Reads Annotation
SYDE1 ENSDARG00000077440 4 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]










Genes with expression patterns similar to SYDE1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SYDE1 ENSDARG00000077440 4 4 - - 1.000 - 1.000 1.000 - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
2. si:ch211-227e10.2 ENSDARG00000100414 1 2 - - - - 1.000 - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
3. CABZ01033130.1 CABZ01033130.1 5 2 - - - - - 1.000 - - 1.000
4. BX927317.2 ENSDARG00000101263 4 1.949 - - - - 1.000 - - - 0.949
5. BX005234.1 ENSDARG00000097761 3 1.858 - - - - 0.858 - - - 1.000
6. atad5b ENSDARG00000101126, ENSDARG00000111647, ENSDARG00000116936 16 1.826 - - 0.888 - - 0.938 - - - ATPase family, AAA domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-030131-338]
7. BX088525.2 ENSDARG00000117222 11 1.767 - - 0.767 - - - - - 1.000
8. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.735 - - - - 0.821 - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
9. ZDHHC1 ENSDARG00000077546 14 1.728 - - - - - 0.861 - - 0.867 zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
10. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
11. rest ENSDARG00000103046 51 1 - - - - - 1.000 - - - RE1-silencing transcription factor [Source:ZFIN;Acc:ZDB-GENE-080415-1]
12. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
13. si:dkey-261j4.4 ENSDARG00000035150 32 1 - - - - - 1.000 - - - si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
14. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
15. si:dkey-56m15.1 si:dkey-56m15.1 1 1 - - - - - 1.000 - - -
16. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
17. si:dkey-282h22.5 ENSDARG00000092458 7 1 - - 1.000 - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
18. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
19. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
20. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
21. NUGGC NUGGC 9 1 - - - - - - - - 1.000
22. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
23. CR854855.2 CR854855.2 1 1 - - - - - 1.000 - - -
24. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
25. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
26. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
27. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
28. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 1 - - - - - 1.000 - - - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
29. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
30. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
31. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
32. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
33. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
34. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
35. CR394546.2 ENSDARG00000090061 3 1 - - - - - 1.000 - - -
36. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
37. CT030048.2 CT030048.2 3 1 - - - - 1.000 - - - -
38. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
39. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
40. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
41. DHDH DHDH 15 1 - - - - 1.000 - - - -
42. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
43. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
44. zgc:153654 ENSDARG00000060322 9 1 - - - - 1.000 - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
45. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
46. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
47. ftr26_1 ENSDARG00000092961 1 1 - - - - - 1.000 - - - finTRIM family, member 26 [Source:ZFIN;Acc:ZDB-GENE-070912-316]
48. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
49. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
50. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
51. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
52. CU302316.1 ENSDARG00000109600 2 1 - - - - - 1.000 - - -
53. U4_1 U4_1 2 1 - - - - 1.000 - - - -
54. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
55. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
56. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
57. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
58. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
59. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
60. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
61. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
62. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
63. CT027705.3 CT027705.3 9 1 - - - - 1.000 - - - -
64. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
65. asip asip 2 1 - - - - 1.000 - - - -
66. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
67. si:ch211-14k19.8 ENSDARG00000088975 7 1 - - 1.000 - - - - - - si:ch211-14k19.8 [Source:ZFIN;Acc:ZDB-GENE-051214-4]
68. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
69. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
70. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
71. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
72. BX005256.5 BX005256.5 25 1 - - - - 1.000 - - - -
73. ovca2 ENSDARG00000103748 38 1 - - - - - 1.000 - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
74. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
75. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
76. APOBEC2 APOBEC2 9 1 - - 1.000 - - - - - -
77. CABZ01016332.1 CABZ01016332.1 5 1 - - - - - 1.000 - - -
78. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
79. htr2a htr2a 1 1 - - - - - - - - 1.000
80. viml ENSDARG00000044501 5 1 - - - - - 1.000 - - - vimentin like [Source:ZFIN;Acc:ZDB-GENE-040426-1743]
81. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
82. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
83. cdc25d ENSDARG00000075599 7 1 - - - - - 1.000 - - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
84. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
85. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
86. GPX2 ENSDARG00000089149 10 1 - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
87. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
88. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
89. si:ch211-214c20.1 ENSDARG00000088082, ENSDARG00000091381 1 1 - - - - - 1.000 - - - si:ch211-214c20.1 [Source:ZFIN;Acc:ZDB-GENE-081103-49]
90. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
91. U6_7 U6_7 0 1 - - - - 1.000 - - - -
92. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
93. l3mbtl1a ENSDARG00000014828 119 1 - - 1.000 - - - - - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
94. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
95. C11H3orf83 C11H3orf83 30 1 - - - - - 1.000 - - -
96. VSIG10L ENSDARG00000089237 12 1 - - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
97. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 - - - - - 1.000 - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
98. si:dkey-155d18.1 1 1 - - - - 1.000 - - - - si:dkey-155d18.1
99. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
100. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000

There are 525 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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