Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYCP3

Gene Name Gene ID Reads Annotation
SYCP3 ENSGALG00000012766 70 synaptonemal complex protein 3, transcript variant X2











Genes with expression patterns similar to SYCP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYCP3 ENSGALG00000012766 70 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 synaptonemal complex protein 3, transcript variant X2
2. NRP2 ENSGALG00000008621 29 0.959 - - - - - - - 0.959 - - neuropilin 2 [Source:NCBI gene;Acc:374157]
3. CHRNA5 ENSGALG00000003021 83 0.947 - - - - - - - 0.947 - - cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]
4. EPHB6 ENSGALG00000014749 30 0.917 - - - - - - - 0.917 - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
5. CX3CR1 ENSGALG00000038000 48 0.887 - - - - - - - 0.887 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
6. EP4 EP4 486 0.884 - - - - - - - 0.884 - -
7. GRIK3 ENSGALG00000002098 111 0.879 - - - - - - - 0.879 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
8. DNASE1L3 386 0.867 - - - - - - - 0.867 - - deoxyribonuclease 1 like 3
9. COL12A1 ENSGALG00000015908 1300 0.864 - - - - - - - 0.864 - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
10. KCTD14 ENSGALG00000017266 31 0.854 - - - - - - - 0.854 - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
11. SGK196 SGK196 83 0.849 - - - - - - - 0.849 - -
12. REEP2 ENSGALG00000017365 338 0.846 - - - - - - - 0.846 - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
13. SH3RF3 ENSGALG00000016810 2169 0.845 - - - - - - - 0.845 - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
14. GJC1 ENSGALG00000000997 2279 0.829 - - - - - - - 0.829 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
15. FADD ENSGALG00000007625 142 0.828 - - - - - - 0.828 - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
16. CYP46A1 ENSGALG00000011162 519 0.826 - - - - - - - 0.826 - - cytochrome P450 family 46 subfamily A member 1 [Source:NCBI gene;Acc:423450]
17. KIAA1024L ENSGALG00000027692 20 0.816 - - - - 0.816 - - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
18. TRMT6 ENSGALG00000009169 1431 0.816 - - - - - - - 0.816 - - tRNA methyltransferase 6 [Source:NCBI gene;Acc:421313]
19. METAP1D ENSGALG00000030254 439 0.811 - - - - - - 0.811 - - - methionyl aminopeptidase type 1D, mitochondrial [Source:HGNC Symbol;Acc:HGNC:32583]
20. CACNA2D2 ENSGALG00000038242 2078 0.805 - - - - - - - 0.805 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
21. BEND6 ENSGALG00000016283 319 0.802 - - - - - - - 0.802 - - BEN domain containing 6 [Source:HGNC Symbol;Acc:HGNC:20871]
22. NDUFV1 ENSGALG00000042809 6222 0.794 - - - - - - - 0.794 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
23. DENND5A ENSGALG00000005840 54 0.792 - - - - - - - - - 0.792 DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
24. SEC24D ENSGALG00000011998 68 0.79 - - - - - - - 0.790 - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
25. SFR1 ENSGALG00000008383 241 0.787 - - - - - - - - - 0.787 SWI5 dependent homologous recombination repair protein 1 [Source:NCBI gene;Acc:770846]
26. CHL1 ENSGALG00000037856 1565 0.779 - - - - - - - 0.779 - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
27. RPS6KA3 ENSGALG00000016406 24 0.773 - - - - - - - - - 0.773 ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
28. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.771 - - - - - - 0.771 - - - family with sequence similarity 83, member D
29. PSD3 ENSGALG00000015428 46 0.766 - - - - - - - - - 0.766 pleckstrin and Sec7 domain containing 3, transcript variant X12
30. SLIT3 ENSGALG00000001916 738 0.762 - - - - - - - 0.762 - - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
31. TOR4A ENSGALG00000008623 1364 0.761 - - - - - - - 0.761 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
32. DCAF10 ENSGALG00000005390 214 0.759 - - - - - - - 0.759 - - DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:HGNC:23686]
33. DD1 DD1 4 0.759 - - - - 0.759 - - - - -
34. ENSGALG00000010911 ENSGALG00000010911 469 0.757 - - - - - - - 0.757 - -
35. KRT15 ENSGALG00000019718 64 0.756 - - - - - - - 0.756 - - keratin 15 [Source:NCBI gene;Acc:408040]
36. SLC22A13 ENSGALG00000005934 8 0.754 - - - - - - 0.754 - - - solute carrier family 22 member 13
37. ADPGK ENSGALG00000001788 208 0.752 - - - - - - 0.752 - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
38. gga-mir-454 ENSGALG00000033526 22 0.744 - - - - - - - 0.744 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
39. MASP1 ENSGALG00000007419 141 0.737 - - - - - - - 0.737 - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
40. CNOT6L ENSGALG00000010333 13 0.736 - - - - - - 0.736 - - - CCR4-NOT transcription complex subunit 6 like [Source:HGNC Symbol;Acc:HGNC:18042]
41. ENSGALG00000018499 ENSGALG00000018499 100 0.736 - - - - - - - 0.736 - -
42. DHX58 ENSGALG00000023821 15 0.735 - - - - - - - 0.735 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
43. CPB1 ENSGALG00000006834 25 0.735 - - - - - - - 0.735 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
44. TAGAP ENSGALG00000013747 34 0.735 - - - - - - - 0.735 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
45. UBE3C ENSGALG00000006461 57 0.735 - - - - - - - 0.735 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
46. KLF11 ENSGALG00000016440 65 0.735 - - - - - - - 0.735 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
47. GNG11 ENSGALG00000029899 327 0.734 - - - - - - - 0.734 - - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
48. ENSGALG00000024395 ENSGALG00000024395 1855 0.733 - - - - - - - 0.733 - -
49. DNAH5 ENSGALG00000012997 28 0.732 - - - 0.732 - - - - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
50. IRF-4 IRF-4 19 0.729 - - - - - - - 0.729 - -
51. ATPBD4 ATPBD4 1823 0.726 - - - - - - - 0.726 - -
52. BTK ENSGALG00000004958 272 0.723 - - - - - - - 0.723 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
53. IL6 ENSGALG00000010915 8 0.722 - - - - - - 0.722 - - - interleukin 6 [Source:NCBI gene;Acc:395337]
54. L3MBTL3 ENSGALG00000034030 113 0.722 - - - - - - 0.722 - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
55. SH3GL1 ENSGALG00000001121 159 0.722 - - - - - - - 0.722 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
56. PSTPIP2 ENSGALG00000040136 37 0.72 - - - - - - - 0.720 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
57. ENSGALG00000016269 ENSGALG00000016269 3 0.72 - - - - - - 0.720 - - -
58. ENSGALG00000012674 ENSGALG00000012674 109 0.72 - - - - - - 0.720 - - -
59. RPL3L ENSGALG00000005458 9 0.72 - - - - - - 0.720 - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
60. ENSGALG00000006003 ENSGALG00000006003 11 0.72 - - - - - - 0.720 - - -
61. RNF212 ENSGALG00000040805 3 0.72 - - - - - - 0.720 - - - ring finger protein 212 [Source:HGNC Symbol;Acc:HGNC:27729]
62. ATP10D ENSGALG00000014192 94 0.72 - - - - - - 0.720 - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
63. JADE3 ENSGALG00000016727 55 0.72 - - - - - - 0.720 - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
64. CTH ENSGALG00000011331 2390 0.72 - - - - - - 0.720 - - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
65. PTGES ENSGALG00000038013 77 0.72 - - - - - - 0.720 - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
66. GLP2R ENSGALG00000041800 10 0.72 - - - - - - 0.720 - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
67. PPFIA2 ENSGALG00000010958 27 0.72 - - - - - - 0.720 - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
68. HAGH ENSGALG00000005398 168 0.72 - - - - - - - 0.720 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
69. CFD ENSGALG00000040832 222 0.72 - - - - - - 0.720 - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
70. IFNAR1 ENSGALG00000030363 22 0.72 - - - - - - 0.720 - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
71. STK36 ENSGALG00000011371 6 0.72 - - - - - - 0.720 - - - serine/threonine kinase 36 [Source:HGNC Symbol;Acc:HGNC:17209]
72. gga-mir-30d ENSGALG00000018290 9 0.72 - - - - - - 0.720 - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
73. UNC80 ENSGALG00000041563 15 0.72 - - - - - - 0.720 - - - unc-80 homolog, NALCN activator, transcript variant X3
74. CSGALNACT1 ENSGALG00000010125 5 0.72 - - - - - - 0.720 - - - chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
75. gga-mir-6579-2 ENSGALG00000035346 7 0.72 - - - - - - 0.720 - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
76. gga-mir-301a ENSGALG00000029989 5 0.72 - - - - - - 0.720 - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
77. HMGXB3 ENSGALG00000005770 119 0.719 - - - - - - - 0.719 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
78. PVALB1 PVALB1 267 0.718 - - - - - - - 0.718 - -
79. PPP2CA_1 ENSGALG00000006462 3170 0.717 - - - - - - - 0.717 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
80. SENP7 ENSGALG00000044642 48 0.713 - - - - - - - 0.713 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
81. VIP ENSGALG00000013604 153 0.711 - - - - - - - 0.711 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
82. SEMA4B ENSGALG00000008297 11202 0.71 - - - - - - - 0.710 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
83. ZDHHC20 ENSGALG00000017126 58 0.71 - - - - - - - 0.710 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
84. PCASP2 ENSGALG00000027961 42 0.708 - - - - - - - 0.708 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
85. CYP2J22 ENSGALG00000011394 76 0.705 - - - - - - - 0.705 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
86. TMEM222 ENSGALG00000000955 2260 0.704 - - - - - - - 0.704 - - transmembrane protein 222 [Source:HGNC Symbol;Acc:HGNC:25363]
87. PARM1 ENSGALG00000010268 13 0.704 - - - - - - - 0.704 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
88. MGEA5 116 0.703 - - - - - - - 0.703 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
89. PRCP ENSGALG00000037521 4012 0.701 - - - - - - - 0.701 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA