Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SYCP1

Gene Name Gene ID Reads Annotation
SYCP1 ENSGALG00000002511 13 synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]











Genes with expression patterns similar to SYCP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SYCP1 ENSGALG00000002511 13 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
2. EGLN3 ENSGALG00000010001 32 1.741 - - - - 0.867 0.874 - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
3. P2RX3 ENSGALG00000040479 5 1.66 - - - - - 0.837 - 0.823 - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
4. LOC100858814 ENSGALG00000028210 3 1.645 - - - 0.808 - 0.837 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
5. BAP1 ENSGALG00000004366 12 1.624 - - 0.882 0.742 - - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
6. CDCP2 ENSGALG00000010752 4 1.599 - - - 0.808 0.791 - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
7. HBS1L ENSGALG00000013962 181 1.504 - - 0.792 - - - - 0.712 - - HBS1 like translational GTPase [Source:HGNC Symbol;Acc:HGNC:4834]
8. MYLK3 ENSGALG00000004334 13 1.419 - - - 0.702 - - - - - 0.717 myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
9. TDRP ENSGALG00000016356 36 1 - - - - - - - 1.000 - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
10. SNORA28 SNORA28 12 1 - - - - - 1.000 - - - -
11. CYLD ENSGALG00000003753 11 1 - - - 1.000 - - - - - - CYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]
12. SUB1L1 ENSGALG00000027147 73 1 - - - - - 1.000 - - - - SUB1 homolog (S. cerevisiae)-like 1
13. DNAH5 ENSGALG00000012997 28 0.995 - - - - - - - 0.995 - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
14. CNGA2 ENSGALG00000007282 2 0.985 - - 0.985 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
15. LRP3 ENSGALG00000004853 13 0.985 - - 0.985 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
16. ENSGALG00000026347 ENSGALG00000026347 2 0.985 - - 0.985 - - - - - - -
17. FHL2 ENSGALG00000016797 11 0.985 - - 0.985 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
18. TLL2 ENSGALG00000005519 10 0.985 - - 0.985 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
19. GAN ENSGALG00000013437 11 0.985 - - 0.985 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
20. GPD1L2 ENSGALG00000012061 31 0.985 - - 0.985 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
21. TNFAIP3 ENSGALG00000013861 11 0.985 - - 0.985 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
22. LOXHD1 ENSGALG00000037829 3 0.985 - - 0.985 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
23. ENSGALG00000009041 ENSGALG00000009041 27 0.985 - - 0.985 - - - - - - -
24. SNX8 ENSGALG00000004255 4 0.985 - - 0.985 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
25. ZMAT4 ENSGALG00000003470 2 0.985 - - 0.985 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
26. POMGNT2 ENSGALG00000011518 36 0.985 - - 0.985 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
27. CLRN2 ENSGALG00000027453 3 0.985 - - 0.985 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
28. CALR3 ENSGALG00000003914 8 0.984 - - 0.984 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
29. LRRC49 ENSGALG00000004059 29 0.98 - - 0.980 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
30. MOK ENSGALG00000011366 85 0.978 - - - - - - - 0.978 - - MOK protein kinase [Source:HGNC Symbol;Acc:HGNC:9833]
31. SLC17A6 ENSGALG00000039254 16 0.968 - - 0.968 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
32. HOXB13 ENSGALG00000033154 71 0.967 - - 0.967 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
33. U4atac U4atac 23 0.962 - - 0.962 - - - - - - -
34. TMEM63B ENSGALG00000010282 7 0.96 - - 0.960 - - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
35. SERAC1 ENSGALG00000013732 24 0.951 - - 0.951 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
36. SLC35A3 12 0.946 - - 0.946 - - - - - - - solute carrier family 35 member A3, transcript variant X7
37. ENSGALG00000001323 ENSGALG00000001323 3 0.946 - - 0.946 - - - - - - -
38. TRPM1 ENSGALG00000003849 5 0.946 - - 0.946 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
39. B4GALNT3 ENSGALG00000012988 12 0.946 - - 0.946 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
40. ENSGALG00000007050 ENSGALG00000007050 28 0.946 - - - - - 0.946 - - - -
41. TNPO1 ENSGALG00000015014 57 0.943 - - 0.943 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
42. CELF2 ENSGALG00000034590 31 0.942 - - - - - - - 0.942 - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
43. SNX18 ENSGALG00000014914 7 0.939 - - 0.939 - - - - - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
44. GCM2 ENSGALG00000012768 6 0.934 - - 0.934 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
45. PPHLN1 ENSGALG00000009547 30 0.929 - - 0.929 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
46. PLXNB1 23 0.925 - - 0.925 - - - - - - - plexin B1, transcript variant X2
47. DLST ENSGALG00000010286 19 0.92 - - 0.920 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
48. DCUN1D3 ENSGALG00000002267 6 0.918 - - 0.918 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
49. DOCK5 ENSGALG00000000311 51 0.917 - - 0.917 - - - - - - - dedicator of cytokinesis 5, transcript variant X2
50. TSPAN18 ENSGALG00000036901 14 0.914 - - - - - 0.914 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
51. TNNC2 ENSGALG00000006835 2963 0.912 - - - - - 0.912 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
52. TGM4 ENSGALG00000033171 19 0.909 - - 0.909 - - - - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
53. UPF3A ENSGALG00000016815 48 0.909 - - 0.909 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
54. MCT2L ENSGALG00000007596 127 0.906 - - 0.906 - - - - - - - monocarboxylate transporter 2-like, transcript variant X5
55. FEM1B ENSGALG00000028906 4 0.9 - - 0.900 - - - - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
56. HOXB1 ENSGALG00000013454 9 0.892 - - 0.892 - - - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
57. EXOC6 ENSGALG00000006763 119 0.889 - - 0.889 - - - - - - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
58. gga-mir-20b gga-mir-20b 7 0.889 - - 0.889 - - - - - - -
59. CXADR ENSGALG00000015701 96 0.888 - - 0.888 - - - - - - - coxsackie virus and adenovirus receptor, transcript variant X2
60. SLC5A11 ENSGALG00000005933 28 0.885 - - 0.885 - - - - - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
61. RPUSD2 ENSGALG00000041216 9 0.884 - - 0.884 - - - - - - - RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
62. ENC1 ENSGALG00000014930 10 0.881 - - 0.881 - - - - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
63. ADAM17 ENSGALG00000016427 49 0.88 - - 0.880 - - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
64. BDNF ENSGALG00000012163 159 0.879 - - - - - 0.879 - - - - brain derived neurotrophic factor [Source:NCBI gene;Acc:396186]
65. CXorf36 ENSGALG00000016215 108 0.872 - - - - - - - 0.872 - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
66. RPE65 ENSGALG00000011259 51 0.87 - - - - - - - 0.870 - - RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
67. PLTP ENSGALG00000036686 79 0.869 - - 0.869 - - - - - - - phospholipid transfer protein [Source:NCBI gene;Acc:428164]
68. IL22RA1 ENSGALG00000004221 71 0.868 - - 0.868 - - - - - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
69. MAT2A ENSGALG00000015366 17 0.867 - - - - 0.867 - - - - - methionine adenosyltransferase 2A, transcript variant X1
70. ENSGALG00000006897 ENSGALG00000006897 13 0.867 - - - - 0.867 - - - - -
71. CD101 12 0.867 - - - - 0.867 - - - - - CD101 molecule, transcript variant X4
72. CLCA1 ENSGALG00000006322 5 0.867 - - - - 0.867 - - - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
73. UGP2 ENSGALG00000008855 20 0.867 - - - - 0.867 - - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
74. GNB4 ENSGALG00000008983 26 0.867 - - - - 0.867 - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
75. ENSGALG00000016601 ENSGALG00000016601 16 0.867 - - - - 0.867 - - - - -
76. PCDH7 ENSGALG00000033883 6 0.867 - - - - 0.867 - - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
77. ENO4 ENSGALG00000009254 19 0.867 - - - - 0.867 - - - - - enolase 4 [Source:HGNC Symbol;Acc:HGNC:31670]
78. XG ENSGALG00000029002 17 0.867 - - - - 0.867 - - - - - Xg blood group
79. ENSGALG00000023879 ENSGALG00000023879 9 0.864 - - 0.864 - - - - - - -
80. NEK9 ENSGALG00000010314 6 0.864 - - 0.864 - - - - - - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
81. TAL2 ENSGALG00000023114 17 0.863 - - - - - 0.863 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
82. TTLL2 ENSGALG00000011344 14 0.861 - - - - - - - - - 0.861 tubulin tyrosine ligase like 2, transcript variant X1
83. C11H16ORF70 C11H16ORF70 7 0.861 - - 0.861 - - - - - - -
84. PTPN21 ENSGALG00000010616 129 0.859 - - 0.859 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
85. MMP23B ENSGALG00000001392 53 0.858 - - 0.858 - - - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
86. ASIC2 ENSGALG00000000367 72 0.858 - - - - - 0.858 - - - - acid sensing ion channel subunit 2, transcript variant X2
87. gga-mir-1458 ENSGALG00000030959 41 0.856 - - - - - 0.856 - - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
88. RNF6 ENSGALG00000017105 11 0.855 - - - - 0.855 - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
89. CLSTN2 ENSGALG00000037387 23 0.854 - - 0.854 - - - - - - - calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]
90. ENSGALG00000015076 ENSGALG00000015076 9 0.853 - - 0.853 - - - - - - -
91. GIT1 ENSGALG00000023703 174 0.853 - - 0.853 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
92. GUCD1 ENSGALG00000006607 32 0.849 - - - - - - - 0.849 - - guanylyl cyclase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14237]
93. FBP2 ENSGALG00000012612 17 0.846 - - 0.846 - - - - - - - fructose-bisphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3607]
94. TFEC ENSGALG00000040557 34 0.845 - - 0.845 - - - - - - - transcription factor EC [Source:NCBI gene;Acc:417773]
95. ELAVL2 ENSGALG00000015799 585 0.843 - - - - - - - 0.843 - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
96. MEGF6L ENSGALG00000009458 14 0.842 - - - - - 0.842 - - - - multiple EGF-like-domains 6-like, transcript variant X21
97. HMGI-C HMGI-C 34 0.838 - - - - - 0.838 - - - -
98. ATP7B ENSGALG00000017021 7 0.837 - - - - - 0.837 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
99. ENSGALG00000015321 ENSGALG00000015321 18 0.837 - - - - - 0.837 - - - -
100. HMX2 ENSGALG00000030875 10 0.837 - - - - - 0.837 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]

There are 188 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA