Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SWIP-1

Gene Name Gene ID Reads Annotation
SWIP-1 SWIP-1 6024











Genes with expression patterns similar to SWIP-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SWIP-1 SWIP-1 6024 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CEP70 ENSGALG00000012087 7992 1.643 - - - - - - - 0.795 0.848 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
3. CDC42BPB ENSGALG00000011432 8220 1.62 - - - - - - 0.870 0.750 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
4. DIAPH1 DIAPH1 357 1.605 - - - - - - - - 0.877 0.728
5. CNOT11 ENSGALG00000039563 11251 1.583 - - - - - - 0.851 0.732 - - CCR4-NOT transcription complex subunit 11
6. ADI1 ENSGALG00000025796 8636 1.578 - - - - - - 0.831 0.747 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
7. LGR4 ENSGALG00000040834 5529 1.574 - - - - - - 0.790 - - 0.784 leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
8. C1GALT1 ENSGALG00000009752 7148 1.561 - - - - - - - 0.765 0.796 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
9. EVL ENSGALG00000011209 5440 1.56 - - - - - - 0.784 0.776 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
10. RIPK1 ENSGALG00000012827 3405 1.556 - - - - - - 0.780 - 0.776 - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
11. ARHGEF3 ENSGALG00000005481 683 1.551 - - - - - - - - 0.806 0.745 Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
12. TM4SF18 4553 1.55 - - - - - - 0.759 0.791 - - transmembrane 4 L six family member 18, transcript variant X2
13. NCAPG ENSGALG00000014425 929 1.542 - - - - - - - - 0.822 0.720 non-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]
14. FKBP7 ENSGALG00000009149 6742 1.536 - - - - - - 0.775 0.761 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
15. PIK3IP1 ENSGALG00000006942 8388 1.522 - - - - - - 0.797 - 0.725 - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
16. RAB5C ENSGALG00000003359 5597 1.519 - - - - - - 0.735 0.784 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
17. R3HDM1 ENSGALG00000012246 6580 1.515 - - - - - - 0.723 0.792 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
18. DCTN4 ENSGALG00000004534 8442 1.514 - - - - - - 0.788 0.726 - - dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518]
19. PAPSS1 ENSGALG00000010542 5631 1.511 - - - - - - 0.769 0.742 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
20. LXR LXR 2599 1.503 - - - - - - 0.715 0.788 - -
21. RAD21 ENSGALG00000029523 25658 1.497 - - - - - - 0.723 - 0.774 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
22. SPCS3 ENSGALG00000010839 19106 1.496 - - - - - - 0.781 - 0.715 - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
23. C11H16ORF80 C11H16ORF80 18673 1.492 - - - - - - 0.730 0.762 - -
24. PSMD13 ENSGALG00000043684 14720 1.485 - - - - - - - 0.754 - 0.731 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
25. CCNDBP1 ENSGALG00000004837 11520 1.479 - - - - - - 0.734 0.745 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
26. NSDHL ENSGALG00000007493 3126 1.476 - - - - - - 0.703 - 0.773 - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
27. PPFIA1 ENSGALG00000035774 5258 1.469 - - - - - - 0.757 0.712 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
28. DCPS ENSGALG00000031143 10191 1.463 - - - - - - 0.746 0.717 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
29. SPCS1 ENSGALG00000001655 7718 1.461 - - - - - - 0.742 0.719 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
30. TAB2 ENSGALG00000012356 3467 1.46 - - - - - - 0.737 - 0.723 - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
31. STRN3 ENSGALG00000040464 9045 1.454 - - - - - - 0.754 0.700 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
32. ALS2 ENSGALG00000008415 2576 1.445 - - - - - - 0.712 - 0.733 - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
33. B4GALT6 ENSGALG00000015151 2770 1.436 - - - - - - 0.711 0.725 - - beta-1,4-galactosyltransferase 6 [Source:NCBI gene;Acc:421092]
34. RPS6KA RPS6KA 6745 1.434 - - - - - - 0.701 - 0.733 -
35. EXOC2 ENSGALG00000012837 4914 1.42 - - - - - - 0.717 0.703 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
36. NUP133 ENSGALG00000011091 3804 1.419 - - - - - - - 0.700 0.719 - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
37. WSB2 ENSGALG00000008151 13246 1.415 - - - - - - 0.711 0.704 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
38. DSP ENSGALG00000012790 17884 0.91 - - - - - - - - 0.910 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
39. SMPDL3B ENSGALG00000000737 223 0.891 - - - - - - - - 0.891 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
40. CDERMO-1 CDERMO-1 279 0.891 - - - - - - - - 0.891 -
41. NUDT6 ENSGALG00000011834 1309 0.882 - - - - - - - - 0.882 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
42. PPIP5K2 ENSGALG00000015264 862 0.866 - - - - - - - - 0.866 - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
43. VPS33A ENSGALG00000004440 2030 0.865 - - - - - - - - 0.865 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
44. GGA.16412 GGA.16412 846 0.864 - - - - - - - - 0.864 -
45. SLC7A6OS ENSGALG00000035575 2878 0.864 - - - - - - - - 0.864 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
46. ILF2 ENSGALG00000011570 23050 0.859 - - - - - - 0.859 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
47. GALT ENSGALG00000026195 2002 0.854 - - - - - - - - 0.854 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
48. FUNDC1 ENSGALG00000028187 10511 0.852 - - - - - - - - 0.852 - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
49. ITGB1BP2 ENSGALG00000005493 628 0.852 - - - - - - - - 0.852 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
50. CARKD CARKD 2914 0.846 - - - - - - - - 0.846 -
51. BSDC1 ENSGALG00000003405 3701 0.845 - - - - - - - - 0.845 - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
52. KLC1 ENSGALG00000011528 1621 0.844 - - - - - - - - 0.844 - kinesin light chain 1, transcript variant X6
53. ENSGALG00000014946 ENSGALG00000014946 40 0.844 - - - - - - - - 0.844 -
54. PCDH20 ENSGALG00000016934 187 0.843 - - - - - - - - 0.843 - protocadherin 20
55. RPS6KA5 ENSGALG00000030580 218 0.841 - - - - - - - - 0.841 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
56. ARL5B ENSGALG00000008557 12887 0.841 - - - - - - - - 0.841 - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
57. RUVBL1 ENSGALG00000005931 9379 0.841 - - - - - - 0.841 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
58. FAM177A1 ENSGALG00000010046 4318 0.84 - - - - - - 0.840 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
59. FAM221A ENSGALG00000010977 695 0.839 - - - - - - - - 0.839 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
60. MPP3 ENSGALG00000042521 1372 0.839 - - - - - - - - 0.839 - membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
61. GPSM1 ENSGALG00000001797 943 0.839 - - - - - - - - 0.839 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
62. MAP3K7 ENSGALG00000015596 15164 0.839 - - - - - - 0.839 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
63. gga-mir-1466 ENSGALG00000025170 487 0.837 - - - - - - - - 0.837 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
64. TDRD7 ENSGALG00000012350 594 0.835 - - - - - - - - 0.835 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
65. ENSGALG00000019710 ENSGALG00000019710 212 0.835 - - - - - - - - 0.835 -
66. DENND6A ENSGALG00000005656 831 0.834 - - - - - - - - 0.834 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
67. PPP1R13B ENSGALG00000011548 88 0.833 - - - - - - - - 0.833 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
68. GSTA GSTA 3130 0.833 - - - - - - - - 0.833 -
69. CPOX ENSGALG00000015240 5292 0.832 - - - - - - - 0.832 - - coproporphyrinogen oxidase
70. NUMB ENSGALG00000009300 4220 0.832 - - - - - - - 0.832 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
71. AHSA2 1504 0.831 - - - - - - - - 0.831 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
72. LSM1 ENSGALG00000003245 4701 0.831 - - - - - - 0.831 - - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
73. UPB1 ENSGALG00000006627 139 0.831 - - - - - - - - 0.831 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
74. CUL2 ENSGALG00000007095 9493 0.83 - - - - - - 0.830 - - - cullin 2 [Source:NCBI gene;Acc:420467]
75. SDC3 ENSGALG00000035184 14096 0.83 - - - - - - - 0.830 - - syndecan 3 [Source:NCBI gene;Acc:396343]
76. HSDL1 ENSGALG00000003273 1108 0.828 - - - - - - - - 0.828 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
77. HSPA4 ENSGALG00000040882 20966 0.828 - - - - - - 0.828 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
78. HEATR5A 1233 0.828 - - - - - - - 0.828 - - HEAT repeat containing 5A, transcript variant X7
79. KIAA1211 ENSGALG00000013771 135 0.828 - - - - - - - - 0.828 - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
80. VTI1A ENSGALG00000008880 279 0.828 - - - - - - - - 0.828 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
81. ACL ACL 1813 0.827 - - - - - - - - 0.827 -
82. AP2A2 ENSGALG00000006799 13874 0.826 - - - - - - 0.826 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
83. NUDT4 ENSGALG00000011285 2998 0.826 - - - - - - 0.826 - - - nudix hydrolase 4, transcript variant X5
84. CLP1 ENSGALG00000007370 2047 0.825 - - - - - - - - 0.825 - cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
85. DTWD2 ENSGALG00000002250 1604 0.825 - - - - - - - - 0.825 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
86. SCML2 ENSGALG00000016537 9348 0.825 - - - - - - 0.825 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
87. ASNS ENSGALG00000009748 11822 0.824 - - - - - - - - 0.824 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
88. SPDL1 ENSGALG00000001942 4403 0.822 - - - - - - - 0.822 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
89. LEMD3 ENSGALG00000009873 347 0.822 - - - - - - - - 0.822 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
90. PPP1R2 ENSGALG00000029789 11594 0.822 - - - - - - 0.822 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
91. SSR3 ENSGALG00000028683 24334 0.821 - - - - - - 0.821 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
92. CCDC104 CCDC104 6584 0.82 - - - - - - - - 0.820 -
93. ASUN ASUN 17129 0.82 - - - - - - 0.820 - - -
94. SH3BGRL ENSGALG00000007128 18708 0.82 - - - - - - - 0.820 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
95. DLG3 ENSGALG00000041900 3016 0.82 - - - - - - - - 0.820 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
96. IPO8 ENSGALG00000012953 499 0.82 - - - - - - - - 0.820 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
97. gga-mir-6681 ENSGALG00000027840 546 0.819 - - - - - - - - 0.819 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
98. FKBP12 FKBP12 64317 0.819 - - - - - - 0.819 - - -
99. CCDC173 358 0.818 - - - - - - - - 0.818 - coiled-coil domain containing 173
100. TMEM177 ENSGALG00000011593 311 0.817 - - - - - - - - 0.817 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]

There are 777 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA