Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SVIP

Gene Name Gene ID Reads Annotation
SVIP ENSGALG00000003648 3894 small VCP interacting protein [Source:NCBI gene;Acc:771022]











Genes with expression patterns similar to SVIP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SVIP ENSGALG00000003648 3894 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small VCP interacting protein [Source:NCBI gene;Acc:771022]
2. CALML4 ENSGALG00000007979 6395 1.497 - - - - - - 0.701 0.796 - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
3. COG1 ENSGALG00000029893 4309 0.832 - - - - - - - 0.832 - - component of oligomeric golgi complex 1 [Source:NCBI gene;Acc:417449]
4. BTG2 ENSGALG00000026858 6716 0.831 - - - - - - - 0.831 - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
5. IFI35 ENSGALG00000002832 1467 0.818 - - - - - - - 0.818 - - interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]
6. SERPINF2 ENSGALG00000002987 236 0.817 - - - - - - - 0.817 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
7. GLB1L2 ENSGALG00000001604 4057 0.812 - - - - - - - 0.812 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
8. CDX1 ENSGALG00000005679 461 0.808 - - - - - - - 0.808 - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
9. LOC770996 ENSGALG00000016570 635 0.801 - - - - - - - 0.801 - - L-gulonolactone oxidase-like
10. PTPRJ ENSGALG00000006382 891 0.798 - - - - - - - 0.798 - - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
11. C1orf159 ENSGALG00000027363 1672 0.797 - - - - - - - 0.797 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
12. STK17A ENSGALG00000031117 454 0.795 - - - - - - - 0.795 - - serine/threonine kinase 17a [Source:NCBI gene;Acc:420775]
13. GPX8 ENSGALG00000026704 4497 0.794 - - - - - - - 0.794 - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
14. CLN8 ENSGALG00000039606 4209 0.794 - - - - - - - 0.794 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
15. TSPAN8 ENSGALG00000010152 2666 0.793 - - - - - - - 0.793 - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
16. VDAC1 ENSGALG00000006503 864 0.79 - - - - - - - 0.790 - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
17. CL2 ENSGALG00000011455 87 0.786 - - - - - - - 0.786 - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
18. ETFA ENSGALG00000002925 24053 0.779 - - - - - - - 0.779 - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
19. HSPB8 ENSGALG00000007383 5333 0.772 - - - - - - - 0.772 - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
20. ACSS1 ENSGALG00000008632 397 0.772 - - - - - - - 0.772 - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
21. PITHD1 ENSGALG00000003986 11470 0.771 - - - - - - - 0.771 - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
22. GPALPP1 ENSGALG00000031567 4221 0.77 - - - - - - 0.770 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
23. PTPN6 ENSGALG00000014561 1399 0.77 - - - - - - - 0.770 - - protein tyrosine phosphatase, non-receptor type 6 [Source:NCBI gene;Acc:427947]
24. KIAA1671 ENSGALG00000005512 2540 0.766 - - - - - - - 0.766 - - KIAA1671 [Source:NCBI gene;Acc:768701]
25. ACADL ENSGALG00000002891 8058 0.764 - - - - - - - 0.764 - - acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
26. GUK1 ENSGALG00000005336 5134 0.763 - - - - - - - 0.763 - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
27. BLM ENSGALG00000008256 6160 0.76 - - - - - - - 0.760 - - Bloom syndrome RecQ like helicase [Source:NCBI gene;Acc:415577]
28. KLF8 ENSGALG00000007570 1651 0.758 - - - - - - - 0.758 - - Kruppel-like factor 8, transcript variant X6
29. EIF2B1 ENSGALG00000003259 9491 0.756 - - - - - - 0.756 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
30. ENSGALG00000001886 ENSGALG00000001886 1024 0.756 - - - - - - - 0.756 - -
31. JAZF1 ENSGALG00000030455 1425 0.755 - - - - - - - 0.755 - - JAZF zinc finger 1 [Source:NCBI gene;Acc:420633]
32. MRPL16 ENSGALG00000029419 8033 0.751 - - - - - - - 0.751 - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
33. ZNF335 ENSGALG00000041370 4740 0.749 - - - - - - - 0.749 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
34. C13H5ORF41 C13H5ORF41 1051 0.748 - - - - - - - 0.748 - -
35. SLC6A13 ENSGALG00000012985 194 0.747 - - - - - - - 0.747 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
36. ELL ENSGALG00000033513 6536 0.746 - - - - - - 0.746 - - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
37. ENSGALG00000026802 ENSGALG00000026802 14688 0.746 - - - - - - - 0.746 - -
38. ZFC3H1 ENSGALG00000010177 1326 0.744 - - 0.744 - - - - - - - zinc finger C3H1-type containing [Source:HGNC Symbol;Acc:HGNC:28328]
39. BAAT ENSGALG00000040619 579 0.743 - - - - - - - 0.743 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
40. GRHPR ENSGALG00000005423 1567 0.743 - - - - - - - 0.743 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
41. GSN ENSGALG00000001446 5605 0.742 - - - - - - - 0.742 - - gelsolin [Source:NCBI gene;Acc:395774]
42. FKBP10 ENSGALG00000025764 7668 0.742 - - - - - - - 0.742 - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
43. NOTCH2 ENSGALG00000002922 3272 0.741 - - - - - - - 0.741 - - notch 2 [Source:NCBI gene;Acc:374031]
44. TNKS1BP1 5193 0.74 - - - - - - - 0.740 - - tankyrase 1 binding protein 1, transcript variant X7
45. AVENAII AVENAII 4552 0.74 - - - - - - 0.740 - - -
46. SGK3 ENSGALG00000043570 2045 0.738 - - - - - - - 0.738 - - serum/glucocorticoid regulated kinase family member 3 [Source:NCBI gene;Acc:420167]
47. CARS ENSGALG00000006427 7660 0.737 - - - - - - 0.737 - - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
48. RAB30 ENSGALG00000017248 359 0.736 - - - - - - - 0.736 - - RAB30, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9770]
49. FTD FTD 3041 0.736 - - - - - - - 0.736 - -
50. GOLGA4 ENSGALG00000041114 1490 0.736 - - 0.736 - - - - - - - golgin A4 [Source:HGNC Symbol;Acc:HGNC:4427]
51. CARS2 ENSGALG00000016847 3814 0.735 - - - - - - 0.735 - - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
52. MCL1 ENSGALG00000044383 6874 0.735 - - - - - - - 0.735 - - Gallus gallus BCL2 family apoptosis regulator (MCL1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001319309]
53. GJB1 ENSGALG00000005541 261 0.734 - - - - - - - 0.734 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
54. MAN2A1 ENSGALG00000000255 4543 0.732 - - - - - - 0.732 - - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
55. SEC24A ENSGALG00000006417 1805 0.731 - - - - - - 0.731 - - - Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. [Source:RefSeq mRNA;Acc:NM_001321593]
56. NDUFAF7 ENSGALG00000010609 2765 0.73 - - - - - - - 0.730 - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]
57. NAGA ENSGALG00000011900 2798 0.73 - - - - - - - 0.730 - - alpha-N-acetylgalactosaminidase [Source:NCBI gene;Acc:396547]
58. VDAC2 ENSGALG00000005002 12592 0.73 - - - - - - 0.730 - - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
59. UGT8L ENSGALG00000005599 93 0.727 - - - - - - - 0.727 - - UDP glycosyltransferase 8-like
60. THOC1 ENSGALG00000014915 5846 0.726 - - - - - - - 0.726 - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
61. NUDT13 ENSGALG00000004319 341 0.726 - - - - - - - 0.726 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
62. SLC2A9 ENSGALG00000014971 751 0.725 - - - - - - - 0.725 - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
63. IGF2BP1 ENSGALG00000041204 6420 0.725 - - - - - - 0.725 - - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
64. NTNG2 ENSGALG00000003677 73 0.725 - - - - - - - 0.725 - - netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
65. SEL1L3 ENSGALG00000039549 1400 0.722 - - - - - - - 0.722 - - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
66. MBNL3 ENSGALG00000032045 10980 0.721 - - - - - - 0.721 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
67. ENSGALG00000001398 ENSGALG00000001398 3248 0.72 - - - - 0.720 - - - - -
68. LANCL1 ENSGALG00000002921 571 0.72 - - - - - - - 0.720 - - LanC like 1 [Source:NCBI gene;Acc:424006]
69. CSMD2 ENSGALG00000030229 716 0.72 - - - - - - - 0.720 - - CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
70. ASCC1 ENSGALG00000026019 3583 0.72 - - 0.720 - - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
71. ZNF341 ENSGALG00000002968 1028 0.72 - - - - - - - 0.720 - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
72. E4F1 ENSGALG00000005900 1814 0.719 - - - - - - 0.719 - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
73. ZFAND2B ENSGALG00000029226 4107 0.719 - - - - - - - 0.719 - - zinc finger AN1-type containing 2B [Source:HGNC Symbol;Acc:HGNC:25206]
74. TSPAN1 106 0.719 - - - - - - - 0.719 - - tetraspanin 1
75. CCDC137 ENSGALG00000004505 2205 0.719 - - - - - - - 0.719 - - coiled-coil domain containing 137 [Source:HGNC Symbol;Acc:HGNC:33451]
76. FBXO32 ENSGALG00000041202 1066 0.719 - - - - - - - 0.719 - - F-box protein 32 [Source:NCBI gene;Acc:420343]
77. ZC3HC1 ENSGALG00000008003 2750 0.717 - - - - - - 0.717 - - - zinc finger C3HC-type containing 1 [Source:NCBI gene;Acc:416679]
78. UGGT1 ENSGALG00000002141 563 0.717 - - - - - - - 0.717 - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15663]
79. CCDC102A ENSGALG00000029999 324 0.717 - - - - - - - 0.717 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
80. ORC6 ENSGALG00000004342 454 0.716 - - - - - - - 0.716 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
81. BUB1B ENSGALG00000036892 2988 0.715 - - 0.715 - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase B [Source:NCBI gene;Acc:378922]
82. EMP2 ENSGALG00000027058 3925 0.714 - - - - - - - 0.714 - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
83. COX17 ENSGALG00000014981 5646 0.714 - - - - - - - 0.714 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
84. FECH ENSGALG00000038461 3491 0.714 - - - - - - 0.714 - - - ferrochelatase [Source:NCBI gene;Acc:374020]
85. TADA2B ENSGALG00000015547 55 0.713 - - 0.713 - - - - - - - transcriptional adaptor 2B [Source:HGNC Symbol;Acc:HGNC:30781]
86. BET1 ENSGALG00000024485 2451 0.713 - - - - - - 0.713 - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
87. MRPL9 ENSGALG00000042941 3370 0.713 - - - - - - - 0.713 - - mitochondrial ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:14277]
88. CHN1 ENSGALG00000009293 6415 0.713 - - - - - - 0.713 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
89. NKAIN2 ENSGALG00000039756 755 0.711 - - 0.711 - - - - - - - sodium/potassium transporting ATPase interacting 2 [Source:NCBI gene;Acc:421720]
90. MIA2 ENSGALG00000010189 1223 0.711 - - - - - - 0.711 - - - melanoma inhibitory activity 2, transcript variant X5
91. CYP20A1 ENSGALG00000008730 930 0.711 - - - - - - - 0.711 - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
92. KATNA1 ENSGALG00000012378 1745 0.711 - - - - - - - 0.711 - - katanin catalytic subunit A1 [Source:NCBI gene;Acc:421626]
93. PRKCDBP PRKCDBP 2249 0.71 - - - - - - - 0.710 - -
94. TAB1 ENSGALG00000012150 4864 0.709 - - - - - - - 0.709 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [Source:NCBI gene;Acc:418014]
95. UBOX5 ENSGALG00000035134 1705 0.709 - - - - - - - 0.709 - - U-box domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17777]
96. LOC771069 ENSGALG00000023936 4093 0.708 - - - - - - - 0.708 - - C-factor-like, transcript variant X2
97. PC7 PC7 1105 0.707 - - - - - - - 0.707 - -
98. SURF2 ENSGALG00000003181 3500 0.706 - - - - - - 0.706 - - - surfeit 2 [Source:NCBI gene;Acc:417156]
99. ENSGALG00000024035 ENSGALG00000024035 544 0.706 - - - - - - - 0.706 - -
100. GLOD5 ENSGALG00000025991 17 0.706 - - - - - - - 0.706 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA