Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SV2B

Gene Name Gene ID Reads Annotation
SV2B SV2B 208










Genes with expression patterns similar to SV2B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SV2B SV2B 208 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. amph ENSDARG00000007663 599 3.786 0.887 1.000 - - - 0.972 0.927 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
3. snap25a ENSDARG00000020609 4537 3.744 0.908 0.945 - - - 0.943 0.948 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
4. stmn2a ENSDARG00000033234 2272 3.743 0.966 0.900 - - - 0.942 0.935 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
5. stx1b ENSDARG00000000503 2724 3.705 0.904 0.918 - - - 0.921 0.962 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
6. scrt2 ENSDARG00000056175 4331 3.699 0.826 0.976 - - - 0.983 0.914 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
7. TUSC5 TUSC5 1436 3.696 0.946 0.868 - - - 0.945 0.937 - -
8. MAP1A MAP1A 847 3.676 0.836 0.967 - - - 0.944 0.929 - -
9. slc1a2b ENSDARG00000102453 3136 3.635 0.944 0.897 - - - 0.888 0.906 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
10. cadm3 ENSDARG00000057013 1545 3.634 0.916 0.821 - - - 0.929 0.968 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
11. pcsk1nl ENSDARG00000076170 1232 3.515 0.760 0.896 - - - 0.919 0.940 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
12. TUBB8P7_1 TUBB8P7_1 2722 3.508 0.901 0.731 - - - 0.933 0.943 - -
13. TUBB2A TUBB2A 142 3.505 0.858 0.909 - - - 0.930 0.808 - -
14. syt11a ENSDARG00000057913 1145 3.504 0.805 0.936 - - - 0.903 0.860 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
15. scn8aa ENSDARG00000005775 792 3.492 0.880 0.876 - - - 0.861 0.875 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
16. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.488 0.920 0.802 - - - 0.919 0.847 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
17. gap43 ENSDARG00000099744 4114 3.484 0.892 0.815 - - - 0.903 0.874 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
18. adam23a ENSDARG00000062323 580 3.47 0.844 0.861 - - - 0.948 0.817 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
19. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.468 0.886 0.751 - - - 0.928 0.903 - -
20. nptx1l ENSDARG00000074671 569 3.462 0.857 0.882 - - - 0.907 0.816 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
21. atp2b3b ENSDARG00000023445 1424 3.462 0.948 0.802 - - - 0.904 0.808 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
22. slc32a1 ENSDARG00000059775 1092 3.451 0.725 0.861 - - - 0.924 0.941 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
23. nadl1.1 1200 3.441 0.815 0.855 - - - 0.849 0.922 - - neural adhesion molecule L1.1, transcript variant X1
24. lhx1a ENSDARG00000014018 958 3.434 0.711 0.939 - - - 0.820 0.964 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
25. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.428 0.822 0.749 - - - 0.976 0.881 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
26. MAP6 MAP6 643 3.37 0.756 0.936 - - - 0.765 0.913 - -
27. pcdh1gc5 ENSDARG00000104826 10052 3.369 0.763 0.766 - - - 0.951 0.889 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
28. nrxn2a ENSDARG00000061454 291 3.364 0.867 0.791 - - - 0.862 0.844 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
29. zic4 ENSDARG00000031307 1228 3.351 0.873 0.848 - - - 0.882 0.748 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
30. rbfox3 rbfox3 1443 3.34 0.772 0.854 - - - 0.787 0.927 - -
31. calb1 ENSDARG00000031598 252 3.337 0.840 0.909 - - - 0.868 0.720 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
32. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.317 0.739 0.904 - - - 0.928 0.746 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
33. nova2 ENSDARG00000017673 7685 3.316 0.713 0.895 - - - 0.853 0.855 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
34. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.31 0.722 0.910 - - - 0.826 0.852 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
35. rtn1b ENSDARG00000021143 1682 3.299 0.779 0.821 - - - 0.950 0.749 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
36. sox2 ENSDARG00000070913 2763 3.219 0.724 0.887 - - - 0.799 0.809 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
37. CLIP3 ENSDARG00000054456 734 3.214 0.814 0.710 - - - 0.862 0.828 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
38. tnika ENSDARG00000056218 728 3.208 0.855 0.728 - - - 0.866 0.759 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
39. entpd3 ENSDARG00000035309 263 3.202 0.721 0.804 - - - 0.795 0.882 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
40. ksr2 ENSDARG00000094526 134 3.115 0.709 0.806 - - - 0.829 0.771 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
41. lhx5 ENSDARG00000057936 785 2.839 0.920 - - - - 0.935 0.984 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
42. scn2b ENSDARG00000101713 796 2.833 0.895 1.000 - - - - 0.938 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
43. sez6l2 ENSDARG00000076052 360 2.828 - 0.940 - - - 0.946 0.942 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
44. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.798 0.869 - - - - 0.940 0.989 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
45. cdk5r1b ENSDARG00000045087 2075 2.775 0.954 - - - - 0.836 0.985 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
46. lingo1a ENSDARG00000034165 179 2.766 - 0.909 - - - 0.919 0.938 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
47. sv2bb ENSDARG00000060711 196 2.764 0.845 0.985 - - - - 0.934 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
48. sh3gl2 sh3gl2 1305 2.759 0.866 - - - - 0.952 0.941 - -
49. cers6 ENSDARG00000053583 247 2.754 0.874 - - - - 0.968 0.912 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
50. rap2ip rap2ip 681 2.74 - 0.940 - - - 0.935 0.865 - -
51. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.74 0.846 - - - - 0.990 0.904 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
52. stxbp1a ENSDARG00000001994 5154 2.735 - 0.836 - - - 0.964 0.935 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
53. stmn4l ENSDARG00000043932 654 2.727 0.825 - - - - 0.965 0.937 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
54. rab3ab ENSDARG00000043835 1267 2.727 0.824 - - - - 0.948 0.955 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
55. gabra5 ENSDARG00000070730 156 2.724 0.923 - - - - 0.882 0.919 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
56. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.716 0.867 1.000 - - - 0.849 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
57. lrrc4.1 ENSDARG00000069402 323 2.7 - 0.846 - - - 0.914 0.940 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
58. nkx1.2lb ENSDARG00000099427 220 2.696 - 0.791 - - - 0.922 0.983 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
59. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.692 0.832 - - - - 0.897 0.963 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
60. syt4 ENSDARG00000036505 421 2.69 0.955 0.838 - - - - 0.897 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
61. slc17a6b ENSDARG00000041150 823 2.689 - 0.909 - - - 0.930 0.850 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
62. C7H4orf48 C7H4orf48 1455 2.685 0.925 - - - - 0.956 0.804 - -
63. INA INA 950 2.681 0.837 - - - - 0.888 0.956 - -
64. gng3 ENSDARG00000009553 2530 2.68 0.780 0.957 - - - - 0.943 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
65. vsnl1a ENSDARG00000023228 1584 2.679 - 0.849 - - - 0.924 0.906 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
66. tuba1c ENSDARG00000055216 8384 2.678 0.813 - - - - 0.919 0.946 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
67. cacng3b ENSDARG00000076401 91 2.677 0.951 0.909 - - - - 0.817 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
68. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.675 0.805 - - - - 0.944 0.926 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
69. sncgb ENSDARG00000109715 1014 2.67 0.728 - - - - 0.957 0.985 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
70. MAPK8IP1_1 MAPK8IP1_1 186 2.669 0.827 - - - - 0.900 0.942 - -
71. MCTP1 MCTP1 219 2.664 0.754 0.986 - - - 0.924 - - -
72. si:ch73-21g5.7 ENSDARG00000093156 9412 2.664 - 0.875 - - - 0.897 0.892 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
73. dbx2 2971 2.662 0.775 0.925 - - - - 0.962 - - developing brain homeobox 2
74. fam219ab ENSDARG00000013813 591 2.661 - 0.909 - - - 0.902 0.850 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
75. neflb ENSDARG00000012426 298 2.657 - 0.909 - - - 0.800 0.948 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
76. SNAP91 ENSDARG00000098809 556 2.657 - 0.799 - - - 0.888 0.970 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
77. her3 ENSDARG00000076857 131 2.656 - 0.909 - - - 0.865 0.882 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
78. mdkb ENSDARG00000020708 5393 2.655 0.892 - - - - 0.931 0.832 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
79. necap1 ENSDARG00000020798 612 2.649 0.807 - - - - 0.923 0.919 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
80. ppp3ca ENSDARG00000004988 615 2.647 0.879 - - - - 0.881 0.887 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
81. mir10d-1 mir10d-1 860 2.646 - 0.870 - - - 0.862 0.914 - -
82. st18 663 2.642 - 0.859 - - - 0.961 0.822 - - suppression of tumorigenicity 18, zinc finger
83. mapk12b ENSDARG00000006409 2246 2.641 - 0.791 - - - 0.946 0.904 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
84. tuba2 ENSDARG00000045014 1490 2.639 0.832 - - - - 0.918 0.889 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
85. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.639 0.890 - - - - 0.764 0.985 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
86. fez1 ENSDARG00000023174 701 2.636 0.840 - - - - 0.970 0.826 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
87. GLRA3 ENSDARG00000011066 242 2.634 0.779 0.899 - - - - 0.956 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
88. pnoca ENSDARG00000025024 467 2.633 0.838 - - - - 0.834 0.961 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
89. nebl ENSDARG00000021200 40 2.632 0.841 0.909 - - - - 0.882 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
90. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.628 0.888 - - - - 0.829 0.911 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
91. eno2 ENSDARG00000014287 2162 2.628 0.857 - - - - 0.936 0.835 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
92. stmn1b ENSDARG00000033655 9491 2.624 0.788 - - - - 0.941 0.895 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
93. itm2ca ENSDARG00000043448 1265 2.624 - 0.820 - - - 0.855 0.949 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
94. penka ENSDARG00000004869 161 2.62 0.906 0.937 - - - - 0.777 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
95. htr3a ENSDARG00000089212 51 2.619 0.927 0.909 - - - 0.783 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
96. LRRN3 LRRN3 261 2.618 0.791 0.896 - - - - 0.931 - -
97. plp1a ENSDARG00000103732 3544 2.617 0.787 - - - - 0.952 0.878 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
98. mllt11 ENSDARG00000071026 2518 2.615 0.835 - - - - 0.947 0.833 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
99. pax6a ENSDARG00000103379 3061 2.61 - 0.792 - - - 0.865 0.953 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
100. BX957337.1 BX957337.1 1685 2.605 0.704 - - - - 0.957 0.944 - -

There are 2493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA