Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SURF1

Gene Name Gene ID Reads Annotation
SURF1 ENSGALG00000033754 2130 SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]











Genes with expression patterns similar to SURF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SURF1 ENSGALG00000033754 2130 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
2. MCAT ENSGALG00000034275 4598 1.702 - - - - - - 0.716 0.986 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
3. CARS ENSGALG00000006427 7660 1.429 - - - - - - 0.708 - 0.721 - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
4. PARPBP ENSGALG00000012756 1895 0.987 - - - - - - - 0.987 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
5. CLCN7 ENSGALG00000030826 3173 0.986 - - - - - - - 0.986 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
6. NF1 ENSGALG00000005660 1610 0.986 - - - - - - - 0.986 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
7. TRAFD1 ENSGALG00000043208 1009 0.985 - - - - - - - 0.985 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
8. CHTF18 ENSGALG00000040157 2140 0.985 - - - - - - - 0.985 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
9. MICU1 ENSGALG00000004372 1978 0.984 - - - - - - - 0.984 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
10. MST4 MST4 1931 0.984 - - - - - - - 0.984 - -
11. ABCE1 ENSGALG00000009961 958 0.983 - - - - - - - 0.983 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
12. NUDT4 ENSGALG00000011285 2998 0.983 - - - - - - - 0.983 - - nudix hydrolase 4, transcript variant X5
13. SUV420H1 SUV420H1 2361 0.983 - - - - - - - 0.983 - -
14. ARHGAP12 ENSGALG00000007254 479 0.982 - - - - - - - 0.982 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
15. DCUN1D2 ENSGALG00000029145 2414 0.982 - - - - - - - 0.982 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
16. PIBPPDD4L ENSGALG00000003345 1689 0.982 - - - - - - - 0.982 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
17. ZNF652 ENSGALG00000001279 1188 0.982 - - - - - - - 0.982 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
18. STAU2 ENSGALG00000031390 2008 0.982 - - - - - - - 0.982 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
19. ZNF142 ENSGALG00000011393 2078 0.982 - - - - - - - 0.982 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
20. KIAA1239 KIAA1239 263 0.981 - - - - - - - 0.981 - -
21. MACF1 ENSGALG00000003693 1043 0.981 - - - - - - - 0.981 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
22. DAB1 ENSGALG00000010857 1085 0.981 - - - - - - - 0.981 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
23. FER1L6 ENSGALG00000033783 196 0.98 - - - - - - - 0.980 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
24. LGALS1_1 ENSGALG00000012420 1560 0.98 - - - - - - - 0.980 - - galectin 1 [Source:NCBI gene;Acc:396491]
25. OFD1 ENSGALG00000016576 1916 0.98 - - - - - - - 0.980 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
26. SLC16A9 ENSGALG00000003172 266 0.98 - - - - - - - 0.980 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
27. FAM92A1 FAM92A1 511 0.98 - - - - - - - 0.980 - -
28. CLUAP1 ENSGALG00000030877 4269 0.979 - - - - - - - 0.979 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
29. FAF1 ENSGALG00000010536 1522 0.979 - - - - - - - 0.979 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
30. ATG2B ENSGALG00000042088 918 0.979 - - - - - - - 0.979 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
31. SMPDL3B ENSGALG00000000737 223 0.979 - - - - - - - 0.979 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
32. ENSGALG00000003847 ENSGALG00000003847 1220 0.979 - - - - - - - 0.979 - -
33. KAT6B ENSGALG00000005035 301 0.979 - - - - - - - 0.979 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
34. SNTB1 ENSGALG00000034528 3907 0.978 - - - - - - - 0.978 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
35. CMTM7 ENSGALG00000011488 1406 0.978 - - - - - - - 0.978 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
36. ENSGALG00000017324 ENSGALG00000017324 8235 0.978 - - - - - - - 0.978 - -
37. SMPD2 ENSGALG00000033245 462 0.977 - - - - - - - 0.977 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
38. WDYHV1 ENSGALG00000030059 2961 0.977 - - - - - - - 0.977 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
39. ZBTB24 ENSGALG00000015231 1384 0.977 - - - - - - - 0.977 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
40. MED12L ENSGALG00000010370 765 0.975 - - - - - - - 0.975 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
41. POLD3 ENSGALG00000017307 2136 0.974 - - - - - - - 0.974 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
42. NAPEPLD ENSGALG00000008285 1295 0.973 - - - - - - - 0.973 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
43. HNMT ENSGALG00000012377 227 0.973 - - - - - - - 0.973 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
44. KIF25 ENSGALG00000011299 2601 0.973 - - - - - - - 0.973 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
45. TAF1B ENSGALG00000016437 2318 0.972 - - - - - - - 0.972 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
46. STX16 ENSGALG00000007541 6458 0.972 - - - - - - - 0.972 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
47. LSMD1 LSMD1 2562 0.969 - - - - - - - 0.969 - -
48. CUL5 ENSGALG00000017165 2480 0.968 - - - - - - - 0.968 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
49. PRKAB2 ENSGALG00000001678 1999 0.967 - - - - - - - 0.967 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
50. RPS6KA RPS6KA 6745 0.967 - - - - - - - 0.967 - -
51. ANO6 ENSGALG00000009638 470 0.967 - - - - - - - 0.967 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
52. OSR1 ENSGALG00000016473 1202 0.966 - - - - - - - 0.966 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
53. ENSGALG00000009863 ENSGALG00000009863 7375 0.966 - - - - - - - 0.966 - -
54. TMEM33 ENSGALG00000014248 6069 0.966 - - - - - - - 0.966 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
55. SUN1 ENSGALG00000003781 3442 0.965 - - - - - - - 0.965 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
56. PPM1B ENSGALG00000030691 4513 0.965 - - - - - - - 0.965 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
57. DMTF1 ENSGALG00000030844 3584 0.965 - - - - - - - 0.965 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
58. GNPAT ENSGALG00000011163 4286 0.964 - - - - - - - 0.964 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
59. MKP3 MKP3 4418 0.964 - - - - - - - 0.964 - -
60. GTF2H4 GTF2H4 5227 0.964 - - - - - - - 0.964 - -
61. TRIP11 ENSGALG00000010763 3146 0.963 - - - - - - - 0.963 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
62. C1orf50 ENSGALG00000004800 4894 0.959 - - - - - - - 0.959 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
63. VWF ENSGALG00000017272 1012 0.955 - - - - - - - 0.955 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
64. PLA2G12A ENSGALG00000012185 5261 0.953 - - - - - - - 0.953 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
65. MPP5 ENSGALG00000009581 724 0.951 - - - - - - - 0.951 - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
66. USP12P1 USP12P1 4193 0.949 - - - - - - - 0.949 - -
67. ZMYM3 ENSGALG00000005533 2927 0.948 - - - - - - - 0.948 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
68. PRRG1 ENSGALG00000016266 3473 0.941 - - - - - - - 0.941 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
69. ESRRG ENSGALG00000009645 2783 0.941 - - - - - - - 0.941 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
70. FBXW5 ENSGALG00000030831 5927 0.941 - - - - - - - 0.941 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
71. CENPI ENSGALG00000005038 2608 0.94 - - - - - - - 0.940 - - centromere protein I [Source:NCBI gene;Acc:395207]
72. OSBPL1A ENSGALG00000015086 2702 0.939 - - - - - - - 0.939 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
73. MAP3K4 ENSGALG00000020003 6378 0.935 - - - - - - - 0.935 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
74. SIPA1L2 ENSGALG00000037506 3651 0.935 - - - - - - - 0.935 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
75. PDGF-A PDGF-A 5166 0.933 - - - - - - - 0.933 - -
76. TMEM185A ENSGALG00000009139 4424 0.932 - - - - - - - 0.932 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
77. LAMB1 ENSGALG00000007905 7737 0.929 - - - - - - - 0.929 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
78. XRCC3 ENSGALG00000011533 3768 0.928 - - - - - - - 0.928 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
79. gga-mir-1737 ENSGALG00000025206 3910 0.925 - - - - - - - 0.925 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
80. SEMA6D ENSGALG00000030542 3780 0.923 - - - - - - - 0.923 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
81. TNNC1 ENSGALG00000001459 7110 0.921 - - - - - - - 0.921 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
82. TTPAL ENSGALG00000004244 2734 0.916 - - - - - - - 0.916 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
83. SMARCD2 ENSGALG00000029304 11867 0.91 - - - - - - - 0.910 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
84. DNA2 ENSGALG00000004037 5426 0.909 - - - - - - - 0.909 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
85. SERINC1 ENSGALG00000014868 12484 0.909 - - - - - - - 0.909 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
86. CHMP2B ENSGALG00000015496 3973 0.906 - - - - - - - 0.906 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
87. COG5 ENSGALG00000042764 4205 0.9 - - - - - - - 0.900 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
88. C10ORF58 C10ORF58 5045 0.899 - - - - - - - 0.899 - -
89. TST ENSGALG00000012488 5314 0.898 - - - - - - - 0.898 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
90. RGN ENSGALG00000016724 3184 0.894 - - - - - - - 0.894 - - regucalcin [Source:NCBI gene;Acc:395480]
91. ATAD2 ENSGALG00000034348 4440 0.893 - - - - - - - 0.893 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
92. RHPN2 ENSGALG00000004814 1865 0.893 - - - - - - - 0.893 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
93. AP3D1 ENSGALG00000000996 16143 0.893 - - - - - - - 0.893 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
94. gga-mir-6596 ENSGALG00000026117 2893 0.893 - - - - - - - 0.893 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
95. POLR1C ENSGALG00000010349 7059 0.891 - - - - - - - 0.891 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
96. ZBED4 ENSGALG00000032659 5313 0.891 - - - - - - - 0.891 - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
97. CNEP1R1 ENSGALG00000029793 6536 0.885 - - - - - - - 0.885 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
98. UHMK1 ENSGALG00000002734 2308 0.883 - - - - - - - 0.883 - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
99. HAUS6 ENSGALG00000015091 9671 0.88 - - - - - - - 0.880 - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
100. GTPBP2 ENSGALG00000010315 1170 0.877 - - - - - - - 0.877 - - GTP binding protein 2

There are 131 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA