Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SUMO3

Gene Name Gene ID Reads Annotation
SUMO3 ENSGALG00000032783 47823 small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]











Genes with expression patterns similar to SUMO3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SUMO3 ENSGALG00000032783 47823 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
2. M6PR ENSGALG00000031681 9442 1.549 - - - - 0.819 - 0.730 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
3. CTU2 4818 1.434 - - - - - - 0.731 0.703 - - cytosolic thiouridylase subunit 2, transcript variant X3
4. PURH PURH 28410 0.993 - - - - - - 0.993 - - -
5. XRN2 ENSGALG00000008372 22164 0.899 - - - - 0.899 - - - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
6. EPFIP1L ENSGALG00000007683 18050 0.899 - - - - 0.899 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
7. SMNDC1 ENSGALG00000008561 14415 0.88 - - - - 0.880 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
8. HNRNPA2B1 ENSGALG00000011036 53662 0.879 - - - - 0.879 - - - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
9. ALDH1A2 ENSGALG00000004270 49483 0.876 - - - - - - 0.876 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
10. HOXA4 ENSGALG00000022622 22327 0.875 - - - - 0.875 - - - - - homeobox A4 [Source:NCBI gene;Acc:395307]
11. ZEB1 ENSGALG00000007260 9277 0.875 - - - - 0.875 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
12. RBM26 ENSGALG00000016910 13769 0.874 - - - - 0.874 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
13. PSMA7 ENSGALG00000030411 42436 0.873 - - - - 0.873 - - - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
14. UBE2G2 ENSGALG00000005667 12689 0.872 - - - - 0.872 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
15. EIF3L ENSGALG00000012296 42627 0.872 - - - - 0.872 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
16. CWC22 ENSGALG00000009001 5984 0.871 - - - - 0.871 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
17. PARVB ENSGALG00000014201 27559 0.868 - - - - - - 0.868 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
18. PAX-7 PAX-7 3856 0.868 - - - - 0.868 - - - - -
19. MLF2 ENSGALG00000014468 45953 0.866 - - - - - - 0.866 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
20. SEC63 ENSGALG00000015308 11596 0.865 - - - - 0.865 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
21. PSMD14 ENSGALG00000011128 13335 0.865 - - - - 0.865 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
22. UQCRC2 ENSGALG00000002490 23477 0.863 - - - - 0.863 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
23. ATP5C1 53961 0.863 - - - - 0.863 - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
24. FAM98A ENSGALG00000010428 9585 0.854 - - - - 0.854 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
25. ABCF2 ENSGALG00000034573 15639 0.853 - - - - 0.853 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
26. BRP44L BRP44L 30452 0.849 - - - - 0.849 - - - - -
27. MTF2 ENSGALG00000043087 15225 0.849 - - - - 0.849 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
28. C15H12ORF49 C15H12ORF49 13250 0.847 - - - - 0.847 - - - - -
29. EEF2 ENSGALG00000033884 62036 0.847 - - - - 0.847 - - - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
30. RUNX1T1 ENSGALG00000033091 17529 0.846 - - - - 0.846 - - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
31. SPG21 ENSGALG00000007262 8050 0.846 - - - - 0.846 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
32. RILPL2 ENSGALG00000003321 5632 0.845 - - - - 0.845 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
33. VPS8 ENSGALG00000006704 5419 0.845 - - - - 0.845 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
34. TNPO3 ENSGALG00000039420 5178 0.844 - - - - 0.844 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
35. CDC5L ENSGALG00000016704 22893 0.843 - - - - 0.843 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
36. MARCKSL1 ENSGALG00000032335 88728 0.842 - - - - 0.842 - - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
37. COX5A ENSGALG00000014121 55281 0.839 - - - - 0.839 - - - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
38. CREPT CREPT 17142 0.838 - - - - 0.838 - - - - -
39. MCM4 ENSGALG00000012915 13151 0.837 - - - - 0.837 - - - - - minichromosome maintenance complex component 4
40. RAE1 ENSGALG00000007653 8930 0.835 - - - - 0.835 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
41. INCENP ENSGALG00000007537 16617 0.833 - - - - 0.833 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
42. PUF60 ENSGALG00000039901 26902 0.83 - - - - 0.830 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
43. C4orf27 C4orf27 16724 0.829 - - - - 0.829 - - - - -
44. NUP37 ENSGALG00000012759 9985 0.829 - - - - 0.829 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
45. SMC3 ENSGALG00000008585 16618 0.829 - - - - 0.829 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
46. TM2D2 ENSGALG00000003356 7088 0.828 - - - - 0.828 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
47. TMEM18 ENSGALG00000028744 11779 0.828 - - - - 0.828 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
48. DNAJC2 ENSGALG00000008249 28064 0.828 - - - - 0.828 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
49. NSG1 ENSGALG00000015010 5829 0.827 - - - - 0.827 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
50. NOL6 ENSGALG00000030730 7191 0.827 - - - - 0.827 - - - - - nucleolar protein 6
51. MYEOV2 MYEOV2 5155 0.827 - - - - 0.827 - - - - -
52. MAP1B ENSGALG00000014999 6288 0.827 - - - - 0.827 - - - - - microtubule associated protein 1B
53. SEC61A2 ENSGALG00000036300 4235 0.827 - - - - 0.827 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
54. MRPL22 ENSGALG00000003919 2760 0.826 - - - - 0.826 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
55. CENPE ENSGALG00000013208 12337 0.825 - - - - 0.825 - - - - - centromere protein E, transcript variant X4
56. EPB41L1 ENSGALG00000034171 3616 0.824 - - - - 0.824 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
57. RALB ENSGALG00000026493 14590 0.824 - - - - 0.824 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
58. RNF113A ENSGALG00000000538 3985 0.824 - - - - 0.824 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
59. HOXB3 ENSGALG00000043219 5198 0.824 - - - - 0.824 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
60. USP1 ENSGALG00000010957 8297 0.824 - - - - 0.824 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
61. TBRG4 ENSGALG00000038102 9269 0.824 - - - - 0.824 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
62. MRPS11 ENSGALG00000006777 16009 0.824 - - - - 0.824 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
63. NDST2 ENSGALG00000005107 4224 0.823 - - - - 0.823 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
64. WHSC1L1 4065 0.823 - - - - 0.823 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
65. ETF1 ENSGALG00000002262 14560 0.823 - - - - 0.823 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
66. CCDC59 ENSGALG00000028648 9272 0.823 - - - - 0.823 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
67. ABCC1 ENSGALG00000006646 2596 0.823 - - - - 0.823 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
68. LUC7L2 ENSGALG00000036238 11817 0.823 - - - - 0.823 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
69. MRPL46 ENSGALG00000006782 5033 0.823 - - - - 0.823 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
70. RAB21 ENSGALG00000010183 7718 0.823 - - - - 0.823 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
71. PGAM5 ENSGALG00000002137 7700 0.822 - - - - 0.822 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
72. BCL9 ENSGALG00000037655 4620 0.822 - - - - 0.822 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
73. HMGB3 ENSGALG00000009071 12011 0.822 - - - - 0.822 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
74. THBS1 ENSGALG00000009626 3521 0.821 - - - - 0.821 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
75. IBA57 ENSGALG00000005328 4362 0.821 - - - - 0.821 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
76. TRIM33 ENSGALG00000001976 7404 0.821 - - - - 0.821 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
77. ESRP2 ENSGALG00000003374 4436 0.821 - - - - 0.821 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
78. OPTC ENSGALG00000003554 3698 0.821 - - - - 0.821 - - - - - opticin [Source:NCBI gene;Acc:395130]
79. AGPAT3 ENSGALG00000031932 6903 0.821 - - - - 0.821 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
80. SAMM50 ENSGALG00000014194 20437 0.821 - - - - 0.821 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
81. PHKA1 ENSGALG00000004801 2510 0.821 - - - - 0.821 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
82. TCF7L2 ENSGALG00000008883 13688 0.821 - - - - 0.821 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
83. MED1 ENSGALG00000001708 9556 0.821 - - - - 0.821 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
84. gga-mir-6584 ENSGALG00000028834 1481 0.82 - - - - 0.820 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
85. TBC1D7 ENSGALG00000012731 4891 0.82 - - - - 0.820 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
86. TMEM39B ENSGALG00000003287 4125 0.819 - - - - 0.819 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
87. HTRA3 ENSGALG00000034673 512 0.819 - - - - 0.819 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
88. MORN4 ENSGALG00000006149 7772 0.818 - - - - 0.818 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
89. ENSGALG00000000360 ENSGALG00000000360 15320 0.818 - - - - 0.818 - - - - -
90. RPS6 ENSGALG00000015082 307412 0.817 - - - - 0.817 - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
91. PPAPDC1B PPAPDC1B 6698 0.816 - - - - 0.816 - - - - -
92. HYOU1 ENSGALG00000007659 3555 0.814 - - - - 0.814 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
93. PSMB2 ENSGALG00000026421 51885 0.813 - - - - 0.813 - - - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
94. OAF ENSGALG00000006715 12518 0.813 - - - - 0.813 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
95. H3-IX_1 H3-IX_1 54392 0.813 - - - - 0.813 - - - - -
96. ENSGALG00000026041 ENSGALG00000026041 13390 0.812 - - - - 0.812 - - - - -
97. KCTD9 ENSGALG00000000275 3455 0.811 - - - - 0.811 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
98. POLR2E ENSGALG00000002591 26405 0.81 - - - - - - - 0.810 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
99. EIF3H ENSGALG00000040522 39919 0.809 - - - - 0.809 - - - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
100. MAD2L1BP ENSGALG00000027871 7835 0.806 - - - - - - - 0.806 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA