Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SUB1

Gene Name Gene ID Reads Annotation
SUB1 ENSGALG00000003248 56412 SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]











Genes with expression patterns similar to SUB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SUB1 ENSGALG00000003248 56412 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
2. PEX2 ENSGALG00000035752 4427 1.698 - - - - 0.840 - - - - 0.858 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
3. PWP1 ENSGALG00000012631 10536 1.693 - - - - 0.854 - - - - 0.839 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
4. COG6 ENSGALG00000017035 2777 1.67 - - - - 0.846 - - - - 0.824 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
5. DAPK3 ENSGALG00000037733 6215 1.658 - - - - 0.851 - 0.807 - - - death-associated protein kinase 3, transcript variant X2
6. NCBP1 ENSGALG00000002087 8907 1.629 - - - - 0.901 - - - - 0.728 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
7. STX2 ENSGALG00000002536 10438 1.618 - - - - 0.809 - - - - 0.809 syntaxin 2 [Source:NCBI gene;Acc:378895]
8. NDUFA4 ENSGALG00000025999 53323 1.615 - - - - 0.867 - - - - 0.748 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
9. SMC6 ENSGALG00000016467 3321 1.615 - - - - 0.829 - - - - 0.786 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
10. CRCP ENSGALG00000002587 8809 1.615 - - - - 0.847 - - - - 0.768 CGRP receptor component [Source:NCBI gene;Acc:396022]
11. MPRIP ENSGALG00000004798 6700 1.612 - - - - 0.856 - - - - 0.756 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
12. ZFR ENSGALG00000003235 8466 1.598 - - - - 0.822 - - - - 0.776 zinc finger RNA binding protein, transcript variant X3
13. ADH5 ENSGALG00000012245 38217 1.594 - - - - 0.827 - - 0.767 - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
14. TXNDC11 ENSGALG00000003154 2224 1.571 - - - - 0.822 - - - - 0.749 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
15. DAP3 ENSGALG00000019796 13278 1.564 - - - - 0.833 - - - - 0.731 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
16. FZD6 ENSGALG00000030626 3336 1.551 - - - - 0.827 - - 0.724 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
17. ERICH1 ENSGALG00000031021 1495 1.549 - - - - 0.827 - - 0.722 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
18. CKAP2 ENSGALG00000017025 25020 1.541 - - - - 0.808 - - - - 0.733 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
19. ZEB1 ENSGALG00000007260 9277 1.54 - - - - - - 0.793 0.747 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
20. SERINC1 ENSGALG00000014868 12484 1.539 - - - - 0.827 - - - - 0.712 serine incorporator 1 [Source:NCBI gene;Acc:421722]
21. RPL14 ENSGALG00000043379 239812 1.527 - - - - - - 0.716 - - 0.811 ribosomal protein L14
22. PPA2 ENSGALG00000010582 22301 1.498 - - - - 0.744 - - - - 0.754 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
23. HEXA ENSGALG00000043828 4789 1.467 - - - - - - - 0.722 - 0.745 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
24. CMPK CMPK 9569 1.439 - - - - - - - 0.739 - 0.700
25. PRPS1 ENSGALG00000004908 27994 0.9 - - - - 0.900 - - - - - phosphoribosyl pyrophosphate synthetase 1
26. CCNB2 ENSGALG00000004161 50324 0.897 - - - - 0.897 - - - - - cyclin B2 [Source:NCBI gene;Acc:415400]
27. ARF6 ENSGALG00000026944 22014 0.893 - - - - 0.893 - - - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
28. EZH2 ENSGALG00000043399 15881 0.885 - - - - 0.885 - - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
29. EXOSC2 ENSGALG00000040373 24275 0.885 - - - - 0.885 - - - - - exosome component 2 [Source:NCBI gene;Acc:417182]
30. METAP2 ENSGALG00000011377 16311 0.882 - - - - 0.882 - - - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
31. RUVBL1 ENSGALG00000005931 9379 0.882 - - - - 0.882 - - - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
32. ITM2A ENSGALG00000004107 29262 0.881 - - - - 0.881 - - - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
33. MSH2 ENSGALG00000008962 9709 0.878 - - - - 0.878 - - - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
34. NDUFB5 ENSGALG00000009076 32963 0.878 - - - - 0.878 - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
35. NDUFA10 ENSGALG00000004302 41948 0.877 - - - - 0.877 - - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
36. UBE2E3 ENSGALG00000020793 9517 0.874 - - - - 0.874 - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
37. CHD4 ENSGALG00000013565 25695 0.874 - - - - 0.874 - - - - - chromodomain helicase DNA binding protein 4
38. SEC22B ENSGALG00000039704 16080 0.874 - - - - 0.874 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
39. TIMM10 ENSGALG00000004845 31395 0.872 - - - - 0.872 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
40. PPP1R7 ENSGALG00000031766 22187 0.872 - - - - 0.872 - - - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
41. ZWILCH ENSGALG00000007736 4939 0.871 - - - - 0.871 - - - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
42. FAM72A ENSGALG00000000791 17723 0.871 - - - - 0.871 - - - - - family with sequence similarity 72 member A, transcript variant X1
43. TBP ENSGALG00000011171 5759 0.868 - - - - 0.868 - - - - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
44. TPMT ENSGALG00000012687 9537 0.868 - - - - 0.868 - - - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
45. CASP3 ENSGALG00000010638 11572 0.868 - - - - 0.868 - - - - - caspase 3 [Source:NCBI gene;Acc:395476]
46. NUPL1 NUPL1 8197 0.867 - - - - 0.867 - - - - -
47. THUMPD3 ENSGALG00000008394 17711 0.865 - - - - 0.865 - - - - - THUMP domain containing 3, transcript variant X2
48. PLS3 ENSGALG00000005930 12625 0.864 - - - - 0.864 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
49. SLC25A24 ENSGALG00000001938 3671 0.863 - - - - 0.863 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
50. GTF2B ENSGALG00000006205 6950 0.863 - - - - 0.863 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
51. TTC37 ENSGALG00000014670 5715 0.863 - - - - 0.863 - - - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
52. CCDC58 ENSGALG00000014413 9022 0.863 - - - - 0.863 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
53. MDFIC ENSGALG00000026838 3881 0.86 - - - - 0.860 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
54. AIMP1 ENSGALG00000010553 17994 0.859 - - - - 0.859 - - - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
55. CCNK ENSGALG00000011138 6416 0.858 - - - - 0.858 - - - - - cyclin K [Source:NCBI gene;Acc:423446]
56. TRAPPC6B ENSGALG00000010157 7567 0.858 - - - - 0.858 - - - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
57. APPBP2 ENSGALG00000005314 6447 0.858 - - - - 0.858 - - - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
58. LARP7 ENSGALG00000012048 8393 0.858 - - - - 0.858 - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
59. ALDH4A1 ENSGALG00000042184 9432 0.858 - - - - 0.858 - - - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
60. FASN ENSGALG00000040896 17372 0.857 - - - - 0.857 - - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
61. TMEM184C ENSGALG00000010019 7856 0.857 - - - - 0.857 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
62. PDHB ENSGALG00000029576 12254 0.857 - - - - 0.857 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
63. MYBBP1A ENSGALG00000001363 10331 0.857 - - - - 0.857 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
64. STOML2 STOML2 15566 0.855 - - - - 0.855 - - - - -
65. ATAD5 ENSGALG00000003294 4830 0.855 - - - - 0.855 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
66. LRWD1 ENSGALG00000001852 13862 0.855 - - - - 0.855 - - - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
67. ENSGALG00000009771 ENSGALG00000009771 10273 0.851 - - - - 0.851 - - - - -
68. GALNTL4 GALNTL4 3548 0.851 - - - - 0.851 - - - - -
69. TAF13 ENSGALG00000015185 11410 0.851 - - - - 0.851 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
70. SFXN3 ENSGALG00000023621 2957 0.85 - - - - 0.850 - - - - - sideroflexin 3 [Source:HGNC Symbol;Acc:HGNC:16087]
71. TCEA2 ENSGALG00000005976 9143 0.85 - - - - 0.850 - - - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
72. ENSGALG00000007509 ENSGALG00000007509 18441 0.849 - - - - 0.849 - - - - -
73. UTP3 ENSGALG00000011553 8814 0.849 - - - - 0.849 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
74. ATP5J 14451 0.849 - - - - 0.849 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
75. EXOSC3 ENSGALG00000002426 7255 0.848 - - - - 0.848 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
76. AP1M1 ENSGALG00000003959 31761 0.848 - - - - 0.848 - - - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
77. NUP188 ENSGALG00000043394 9288 0.848 - - - - 0.848 - - - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
78. MRPL3 ENSGALG00000040873 21053 0.847 - - - - 0.847 - - - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
79. SMARCE1 ENSGALG00000003882 49063 0.847 - - - - - - 0.847 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
80. PHB ENSGALG00000038604 21632 0.847 - - - - 0.847 - - - - - prohibitin [Source:NCBI gene;Acc:419980]
81. MICALL1 ENSGALG00000012265 3753 0.846 - - - - 0.846 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
82. TMX4 ENSGALG00000028587 3513 0.846 - - - - 0.846 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
83. DCAF12 ENSGALG00000005800 6419 0.844 - - - - 0.844 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
84. ANP32E ENSGALG00000039891 35925 0.844 - - - - 0.844 - - - - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
85. BRMS1L ENSGALG00000010093 4964 0.844 - - - - 0.844 - - - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
86. H2AFY_1 ENSGALG00000040141 4895 0.844 - - - - 0.844 - - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
87. PLA2G12A ENSGALG00000012185 5261 0.844 - - - - 0.844 - - - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
88. ARPC3 ENSGALG00000003820 29128 0.843 - - - - 0.843 - - - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
89. ITPA ENSGALG00000003250 7722 0.842 - - - - 0.842 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
90. MAPKAPK2 ENSGALG00000000883 6174 0.842 - - - - 0.842 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
91. PELI1 ENSGALG00000008837 11561 0.842 - - - - 0.842 - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
92. IGF2BP2 ENSGALG00000033195 11421 0.842 - - - - 0.842 - - - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
93. RASA2 ENSGALG00000002850 2231 0.841 - - - - 0.841 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
94. C19orf70 ENSGALG00000026847 19315 0.841 - - - - 0.841 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
95. MKKS ENSGALG00000009013 9301 0.84 - - - - 0.840 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
96. NOLC1 ENSGALG00000041124 12765 0.839 - - - - 0.839 - - - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
97. HMGN1 ENSGALG00000016067 17375 0.839 - - - - 0.839 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
98. SPSB1 ENSGALG00000002506 2205 0.837 - - - - 0.837 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
99. DNAJC25 ENSGALG00000015684 4554 0.837 - - - - 0.837 - - - - - DnaJ heat shock protein family (Hsp40) member C25
100. KIAA1524 ENSGALG00000015360 3527 0.836 - - - - 0.836 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]

There are 469 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA