Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STXBP3

Gene Name Gene ID Reads Annotation
STXBP3 ENSGALG00000002001 1740 syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]











Genes with expression patterns similar to STXBP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STXBP3 ENSGALG00000002001 1740 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
2. CCDC135 CCDC135 220 1.51 - - 0.714 - - - - - - 0.796
3. GTF2H1 ENSGALG00000042340 1553 0.999 - - - - - - - 0.999 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
4. ERICH1 ENSGALG00000031021 1495 0.999 - - - - - - - 0.999 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
5. XPOT ENSGALG00000009835 2953 0.998 - - - - - - - 0.998 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
6. ANKS1B ENSGALG00000011549 440 0.998 - - - - - - - 0.998 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
7. UQCC UQCC 5913 0.998 - - - - - - - 0.998 - -
8. ADAMTSL1 1479 0.998 - - - - - - - 0.998 - - ADAMTS like 1, transcript variant X3
9. NEK1 ENSGALG00000009683 4305 0.998 - - - - - - - 0.998 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
10. ERAL1 ENSGALG00000003995 1114 0.998 - - - - - - - 0.998 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
11. CHEK2 ENSGALG00000005695 1558 0.998 - - - - - - - 0.998 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
12. PIK3C2B ENSGALG00000037043 4522 0.998 - - - - - - - 0.998 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
13. FPGS ENSGALG00000042460 1749 0.998 - - - - - - - 0.998 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
14. MAP9 ENSGALG00000020253 785 0.998 - - - - - - - 0.998 - - microtubule associated protein 9, transcript variant X7
15. PDE4B ENSGALG00000011094 1871 0.998 - - - - - - - 0.998 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
16. HEXA ENSGALG00000043828 4789 0.998 - - - - - - - 0.998 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
17. CRADD ENSGALG00000011297 1653 0.998 - - - - - - - 0.998 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
18. C12orf45 C12orf45 2445 0.998 - - - - - - - 0.998 - -
19. PDIA3 ENSGALG00000008348 4982 0.997 - - - - - - - 0.997 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
20. EFNB1 ENSGALG00000036539 2706 0.997 - - - - - - - 0.997 - - ephrin B1 [Source:NCBI gene;Acc:395896]
21. FAM69B ENSGALG00000002437 1253 0.997 - - - - - - - 0.997 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
22. ATOX1 ENSGALG00000004176 16486 0.997 - - - - - - - 0.997 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
23. MED1 ENSGALG00000001708 9556 0.997 - - - - - - - 0.997 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
24. DUSP3 ENSGALG00000035369 1790 0.997 - - - - - - - 0.997 - - dual specificity phosphatase 3
25. C20ORF7 C20ORF7 2383 0.997 - - - - - - - 0.997 - -
26. ELP3 ENSGALG00000016624 4483 0.996 - - - - - - - 0.996 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
27. VPS39 ENSGALG00000008991 4018 0.996 - - - - - - - 0.996 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
28. ANKRD49 ENSGALG00000017210 3247 0.995 - - - - - - - 0.995 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
29. ARPC5L ENSGALG00000001014 5642 0.995 - - - - - - - 0.995 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
30. WDR92 ENSGALG00000008760 3934 0.995 - - - - - - - 0.995 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
31. IFT81 ENSGALG00000003854 2534 0.995 - - - - - - - 0.995 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
32. PDS5B ENSGALG00000017070 3998 0.994 - - - - - - - 0.994 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
33. DCTN6 ENSGALG00000010298 7507 0.994 - - - - - - - 0.994 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
34. FZD6 ENSGALG00000030626 3336 0.994 - - - - - - - 0.994 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
35. BCL2L1 ENSGALG00000006211 2490 0.993 - - - - - - - 0.993 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
36. FABP3 ENSGALG00000037050 873 0.992 - - - - - - - 0.992 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
37. SOX9 ENSGALG00000004386 14802 0.991 - - - - - - - 0.991 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
38. TBC1D1 ENSGALG00000039380 4423 0.991 - - - - - - - 0.991 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
39. EIF1AY ENSGALG00000016410 6431 0.99 - - - - - - - 0.990 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
40. PES1 ENSGALG00000007778 12248 0.989 - - - - - - - 0.989 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
41. C4orf46 ENSGALG00000009432 3255 0.988 - - - - - - - 0.988 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
42. SDHA ENSGALG00000013167 6509 0.986 - - - - - - - 0.986 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
43. EMC7 ENSGALG00000009637 4969 0.986 - - - - - - - 0.986 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
44. CABIN1 ENSGALG00000006363 4415 0.984 - - - - - - - 0.984 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
45. ZEB1 ENSGALG00000007260 9277 0.984 - - - - - - - 0.984 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
46. UBE2B ENSGALG00000032664 6069 0.981 - - - - - - - 0.981 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
47. TAB2 ENSGALG00000012356 3467 0.975 - - - - - - - 0.975 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
48. SURF6 ENSGALG00000038413 11178 0.972 - - - - - - - 0.972 - - surfeit 6 [Source:NCBI gene;Acc:417160]
49. CMPK CMPK 9569 0.968 - - - - - - - 0.968 - -
50. POLR2H ENSGALG00000008534 21521 0.967 - - - - - - - 0.967 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
51. ACTR3 ENSGALG00000012159 16020 0.963 - - - - - - - 0.963 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
52. DEK ENSGALG00000012684 14179 0.963 - - - - - - - 0.963 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
53. LUC7L2 ENSGALG00000036238 11817 0.963 - - - - - - - 0.963 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
54. PPP2R5D ENSGALG00000040005 6804 0.959 - - - - - - - 0.959 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
55. DYNC1LI1 ENSGALG00000011491 11011 0.956 - - - - - - - 0.956 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
56. SUCLG1 ENSGALG00000015961 14323 0.955 - - - - - - - 0.955 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
57. WDR61 ENSGALG00000003221 11352 0.945 - - - - - - - 0.945 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
58. PDLIM1 ENSGALG00000005422 3385 0.944 - - - - - - - 0.944 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
59. POC1A ENSGALG00000034572 1572 0.943 - - - - - - - 0.943 - - POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488]
60. ARHGAP18 ENSGALG00000031843 2117 0.943 - - - - - - - 0.943 - - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
61. PCMTD2 ENSGALG00000005901 1833 0.942 - - - - - - - 0.942 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
62. EHMT1 ENSGALG00000033678 5720 0.941 - - - - - - - 0.941 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
63. MIPEP ENSGALG00000017118 8666 0.939 - - - - - - - 0.939 - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
64. C28H19ORF10 C28H19ORF10 16529 0.934 - - - - - - - 0.934 - -
65. PUM2 ENSGALG00000016481 23625 0.931 - - - - - - - 0.931 - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
66. XPR1 ENSGALG00000003893 5642 0.93 - - - - - - - 0.930 - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
67. SHISA5 ENSGALG00000004661 8573 0.929 - - - - - - - 0.929 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
68. SPINT1 ENSGALG00000008469 5735 0.929 - - - - - - - 0.929 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
69. FDX1 ENSGALG00000026507 2573 0.927 - - - - - - - 0.927 - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
70. PFDN2 ENSGALG00000026374 22020 0.926 - - - - - - - 0.926 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
71. ACADS ENSGALG00000007072 2737 0.925 - - - - - - - 0.925 - - acyl-CoA dehydrogenase short chain [Source:NCBI gene;Acc:416969]
72. CASK ENSGALG00000042400 8485 0.925 - - - - - - - 0.925 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
73. GATA6 ENSGALG00000014976 3256 0.923 - - - - - - - 0.923 - - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
74. TLE4 TLE4 7278 0.92 - - - - - - - 0.920 - -
75. MAP3K8 ENSGALG00000007356 188 0.914 - - 0.914 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
76. TET1 ENSGALG00000031604 13002 0.912 - - - - - - - 0.912 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
77. MICAL1 ENSGALG00000032190 134 0.91 - - 0.910 - - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]
78. RAB14 ENSGALG00000001474 12617 0.909 - - - - - - - 0.909 - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
79. FOXK2 ENSGALG00000001577 6346 0.908 - - - - - - - 0.908 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
80. ASF1A ENSGALG00000014887 11319 0.894 - - - - - - - 0.894 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
81. CHP1 ENSGALG00000008569 6876 0.894 - - - - - - - 0.894 - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
82. SSX2IP ENSGALG00000008763 354 0.89 - - 0.890 - - - - - - - SSX family member 2 interacting protein [Source:NCBI gene;Acc:424532]
83. BASP1 ENSGALG00000012952 19549 0.889 - - - - - - - 0.889 - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
84. ENSGALG00000011942 ENSGALG00000011942 175 0.889 - - 0.889 - - - - - - -
85. NAA15 ENSGALG00000009782 18563 0.888 - - - - - - - 0.888 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
86. C1H11ORF70 ENSGALG00000017189 395 0.888 - - 0.888 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
87. HLX ENSGALG00000037257 5834 0.886 - - - - - - - 0.886 - - H2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]
88. KIF2A ENSGALG00000014737 16391 0.885 - - - - - - - 0.885 - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
89. TBCA ENSGALG00000004353 18510 0.885 - - - - - - - 0.885 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
90. ACTN1 ENSGALG00000042458 10477 0.884 - - - - - - - 0.884 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
91. SMNDC1 ENSGALG00000008561 14415 0.871 - - - - - - - 0.871 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
92. FAM168B ENSGALG00000002172 12162 0.865 - - - - - - - 0.865 - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
93. CDC40 ENSGALG00000015061 6118 0.853 - - - - - - - 0.853 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
94. RBM38 ENSGALG00000026081 7115 0.849 - - - - - - - 0.849 - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
95. TMEM136 ENSGALG00000026316 668 0.845 - - 0.845 - - - - - - - transmembrane protein 136 [Source:NCBI gene;Acc:100857845]
96. E2F6 ENSGALG00000016454 4747 0.845 - - - - - - - 0.845 - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
97. FGFR1OP2 ENSGALG00000014084 1881 0.844 - - 0.844 - - - - - - - FGFR1 oncogene partner 2 [Source:NCBI gene;Acc:418214]
98. HIRA ENSGALG00000033598 296 0.841 - - 0.841 - - - - - - - histone cell cycle regulator [Source:NCBI gene;Acc:374074]
99. DKC1 ENSGALG00000005054 30350 0.835 - - - - - - - 0.835 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
100. POLR2D ENSGALG00000002057 14548 0.834 - - - - - - - 0.834 - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA