Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STRN3

Gene Name Gene ID Reads Annotation
STRN3 ENSGALG00000040464 9045 striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]











Genes with expression patterns similar to STRN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STRN3 ENSGALG00000040464 9045 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
2. CAT ENSGALG00000030187 7534 2.301 - - 0.739 - - - 0.829 - 0.733 - catalase [Source:NCBI gene;Acc:423600]
3. KLHL15 ENSGALG00000016345 1638 2.269 - - 0.842 - - - - 0.709 0.718 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
4. RRP1B ENSGALG00000035696 12309 2.24 - - - - - - 0.715 0.797 0.728 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
5. BLMH ENSGALG00000004259 36907 1.696 - - - - - - 0.868 0.828 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
6. TXNDC12 ENSGALG00000010569 13822 1.664 - - 0.828 - - - 0.836 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
7. CASP1 ENSGALG00000001049 1067 1.663 - - 0.886 - - - - 0.777 - - caspase 1, transcript variant X2
8. ATP5F1 80590 1.661 - - 0.919 - - - 0.742 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
9. MBIP ENSGALG00000010096 2476 1.645 - - 0.852 - - - - 0.793 - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
10. AZIN1 ENSGALG00000029295 11085 1.613 - - - - - - 0.750 0.863 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
11. LARS ENSGALG00000007494 13966 1.609 - - 0.849 - - - - 0.760 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
12. FAM18B1 ENSGALG00000001335 5177 1.608 - - - - - - 0.731 0.877 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
13. NUP93 ENSGALG00000003010 16504 1.607 - - 0.849 - - - - 0.758 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
14. AXIN1 ENSGALG00000029402 2802 1.602 - - 0.790 - - - - 0.812 - - axin 1 [Source:NCBI gene;Acc:395786]
15. XBP1 ENSGALG00000005796 14007 1.601 - - - - - - 0.803 0.798 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
16. TM4SF18 4553 1.597 - - - - - - 0.781 0.816 - - transmembrane 4 L six family member 18, transcript variant X2
17. CHRAC1 ENSGALG00000040823 5695 1.597 - - - - - - 0.753 0.844 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
18. DJ-1 DJ-1 13462 1.585 - - - - - - 0.781 0.804 - -
19. MELK ENSGALG00000016438 9237 1.579 - - 0.817 - - - 0.762 - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
20. DCUN1D4 ENSGALG00000014078 2393 1.579 - - 0.833 - - - - 0.746 - - defective in cullin neddylation 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28998]
21. RCN2 ENSGALG00000039284 17848 1.576 - - - - - - 0.749 0.827 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
22. PIH1D3 ENSGALG00000004870 1365 1.569 - - 0.855 - - - - - 0.714 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
23. NUP37 ENSGALG00000012759 9985 1.567 - - - - - - 0.771 0.796 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
24. TANC1 ENSGALG00000012570 4196 1.562 - - 0.821 - - - - 0.741 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
25. ATR ENSGALG00000002663 4626 1.562 - - - - - - 0.721 0.841 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
26. ANAPC16 ENSGALG00000004410 18001 1.56 - - - - - - 0.761 0.799 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
27. CTBP1 ENSGALG00000039942 9383 1.56 - - 0.858 - - - 0.702 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
28. ZC3H13 ENSGALG00000016984 21043 1.559 - - 0.840 - - - 0.719 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
29. MTAP ENSGALG00000008174 10976 1.559 - - - - - - 0.824 0.735 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
30. GARNL3 ENSGALG00000000847 3423 1.556 - - 0.786 - - - - 0.770 - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
31. MSRA ENSGALG00000028032 2607 1.552 - - 0.844 - - - - 0.708 - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
32. C10orf88 ENSGALG00000000011 6026 1.551 - - - - - - 0.715 0.836 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
33. NAF1 ENSGALG00000009496 2003 1.55 - - - - - - - 0.780 0.770 - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
34. NDUFA12 ENSGALG00000011325 19807 1.55 - - - - - - 0.732 0.818 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
35. MIB1 ENSGALG00000014974 3583 1.548 - - - - - - - 0.807 0.741 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
36. C1H11ORF73 C1H11ORF73 10071 1.547 - - - - - - 0.725 0.822 - -
37. EVL ENSGALG00000011209 5440 1.542 - - - - - - 0.776 0.766 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
38. PSMD10 ENSGALG00000008287 11380 1.542 - - - - - - - 0.781 - 0.761 proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
39. RAB10 ENSGALG00000016535 5272 1.541 - - 0.791 - - - 0.750 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
40. SNX7 ENSGALG00000005478 4736 1.541 - - - - - - 0.747 0.794 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
41. ADI1 ENSGALG00000025796 8636 1.538 - - - - - - 0.755 0.783 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
42. CDK2AP1 ENSGALG00000034919 5469 1.538 - - - - - - 0.745 0.793 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
43. PCF11 ENSGALG00000017249 4714 1.536 - - - - - - 0.740 0.796 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
44. METTL11A METTL11A 11876 1.536 - - 0.815 - - - - 0.721 - -
45. COX11 ENSGALG00000027190 4475 1.535 - - - - - - 0.757 0.778 - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
46. KDM3B ENSGALG00000007663 7189 1.535 - - - - - - 0.706 0.829 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
47. CENPK ENSGALG00000014753 12414 1.534 - - - - - - 0.722 0.812 - - centromere protein K [Source:NCBI gene;Acc:427162]
48. DSCR3 3583 1.534 - - 0.815 - - - - 0.719 - - DSCR3 arrestin fold containing, transcript variant X1
49. CDC42BPB ENSGALG00000011432 8220 1.532 - - - - - - 0.726 0.806 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
50. ARFIP1 ENSGALG00000041361 7351 1.529 - - - - - - 0.805 0.724 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
51. DNAJA4 ENSGALG00000036850 6847 1.527 - - - - - - 0.777 0.750 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
52. SETD3 ENSGALG00000034802 4125 1.525 - - 0.733 - - - - 0.792 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
53. NIPSNAP3L ENSGALG00000027334 7514 1.524 - - 0.776 - - - 0.748 - - - nipsnap homolog 3-like
54. RUVBL1 ENSGALG00000005931 9379 1.523 - - - - - - 0.778 - 0.745 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
55. FAM63B 3793 1.519 - - - - - - 0.716 0.803 - - family with sequence similarity 63 member B
56. INCENP ENSGALG00000007537 16617 1.516 - - - - - - 0.758 0.758 - - inner centromere protein [Source:NCBI gene;Acc:396270]
57. RPL22 ENSGALG00000000719 74238 1.513 - - 0.804 - - - 0.709 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
58. TBPL1 ENSGALG00000013981 3710 1.513 - - 0.807 - - - - 0.706 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
59. SAMD13 ENSGALG00000008835 1597 1.513 - - - - - - - 0.779 0.734 - sterile alpha motif domain containing 13 [Source:NCBI gene;Acc:424541]
60. MORF4L1 ENSGALG00000008146 29940 1.511 - - - - 0.741 - 0.770 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
61. C1orf174 ENSGALG00000000975 4947 1.51 - - 0.792 - - - 0.718 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
62. RAB18 ENSGALG00000007435 3589 1.509 - - - - - - 0.729 0.780 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
63. RIT1 ENSGALG00000014647 7174 1.509 - - 0.711 - - - - 0.798 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
64. TMEM14A ENSGALG00000019894 5279 1.506 - - 0.780 - - - - 0.726 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
65. GPBP1L1 ENSGALG00000010276 10253 1.505 - - 0.741 - - - - 0.764 - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
66. WWC3 ENSGALG00000034834 9392 1.501 - - - - - - 0.755 0.746 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
67. C11H16ORF80 C11H16ORF80 18673 1.494 - - - - - - 0.706 0.788 - -
68. GBE1 ENSGALG00000042771 2323 1.49 - - 0.773 - - - - 0.717 - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
69. ATAD5 ENSGALG00000003294 4830 1.489 - - - - - - - 0.713 0.776 - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
70. SLC15A4 ENSGALG00000002695 2729 1.482 - - - - - - 0.753 0.729 - - solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
71. SPCS1 ENSGALG00000001655 7718 1.48 - - - - - - 0.705 0.775 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
72. JMJD6 ENSGALG00000001802 5169 1.478 - - 0.777 - - - 0.701 - - - jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
73. UBFD1 ENSGALG00000006117 5242 1.477 - - - - - - 0.705 0.772 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
74. EXOC2 ENSGALG00000012837 4914 1.477 - - - - - - 0.724 0.753 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
75. CHM ENSGALG00000006906 4953 1.476 - - - - - - 0.713 0.763 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
76. AGPS ENSGALG00000009236 2250 1.474 - - - - - - 0.765 0.709 - - alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
77. ERCC3 ENSGALG00000011515 3133 1.472 - - - - - - 0.706 0.766 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
78. ZADH2 ENSGALG00000022882 11790 1.469 - - - - - - 0.746 0.723 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
79. GNAI2 ENSGALG00000035645 9535 1.468 - - - - - - 0.749 0.719 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
80. RSL1D1 ENSGALG00000033690 13638 1.468 - - 0.740 - - - 0.728 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
81. R3HDM1 ENSGALG00000012246 6580 1.467 - - - - - - 0.726 0.741 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
82. DCPS ENSGALG00000031143 10191 1.465 - - - - - - 0.710 0.755 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
83. TOP2B ENSGALG00000011300 25048 1.465 - - 0.751 - - - 0.714 - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
84. HCCS ENSGALG00000005571 4939 1.46 - - - - - - 0.712 0.748 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
85. GTF2E2 ENSGALG00000010283 3936 1.458 - - - - - - 0.753 0.705 - - general transcription factor IIE subunit 2 [Source:NCBI gene;Acc:771227]
86. PAPSS1 ENSGALG00000010542 5631 1.458 - - - - - - 0.717 0.741 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
87. GXYLT1 ENSGALG00000009532 5682 1.458 - - - - - - 0.718 0.740 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
88. ANAPC1 ENSGALG00000008254 2519 1.456 - - - - - - 0.713 0.743 - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
89. SWIP-1 SWIP-1 6024 1.454 - - - - - - 0.754 0.700 - -
90. MRPL46 ENSGALG00000006782 5033 1.454 - - 0.738 - - - - 0.716 - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
91. IFRD1 ENSGALG00000009448 8865 1.453 - - - - - - 0.727 0.726 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
92. SOX18 ENSGALG00000034118 5453 1.453 - - - - - - 0.727 0.726 - - SRY-box 18 [Source:NCBI gene;Acc:374200]
93. TTC14 ENSGALG00000008889 3828 1.452 - - - - - - 0.719 0.733 - - tetratricopeptide repeat domain 14 [Source:NCBI gene;Acc:424970]
94. GPR107 ENSGALG00000004052 3392 1.447 - - 0.726 - - - - 0.721 - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
95. PCM1 ENSGALG00000013602 6347 1.445 - - - - - - 0.722 0.723 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
96. API5 ENSGALG00000037968 18265 1.445 - - 0.734 - - - 0.711 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
97. MPI ENSGALG00000029296 11781 1.445 - - - - - - 0.736 0.709 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
98. WDR61 ENSGALG00000003221 11352 1.441 - - 0.740 - - - 0.701 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
99. CTDSPL2 ENSGALG00000008199 3534 1.439 - - - - - - 0.713 0.726 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
100. FAM177A1 ENSGALG00000010046 4318 1.433 - - - - - - 0.729 0.704 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]

There are 1176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA