Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for STRADB

Gene Name Gene ID Reads Annotation
STRADB STRADB 403










Genes with expression patterns similar to STRADB

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. STRADB STRADB 403 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. sacs ENSDARG00000091042 314 1.628 - 0.846 - - - 0.782 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
3. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.564 0.790 - - - - 0.774 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
4. HECTD4 ENSDARG00000101079 952 1.532 0.790 0.742 - - - - - - - HECT domain E3 ubiquitin protein ligase 4 [Source:HGNC Symbol;Acc:HGNC:26611]
5. morc3a ENSDARG00000056679 648 1.472 0.744 - - - - 0.728 - - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
6. zgc:171727 ENSDARG00000105781 350 1.462 - 0.710 - - - - 0.752 - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
7. phc2b_1 ENSDARG00000013224 1316 1.419 - 0.710 - - - 0.709 - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
8. si:ch211-283g2.1 ENSDARG00000046091 123 0.929 0.929 - - - - - - - - si:ch211-283g2.1 [Source:ZFIN;Acc:ZDB-GENE-060531-57]
9. mettl5 ENSDARG00000068893 159 0.929 0.929 - - - - - - - - methyltransferase like 5 [Source:ZFIN;Acc:ZDB-GENE-041010-21]
10. narf_1 ENSDARG00000024184, ENSDARG00000110086 127 0.921 0.921 - - - - - - - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
11. RNF223 93 0.921 0.921 - - - - - - - - ring finger protein 223
12. zgc:63568 ENSDARG00000087262 76 0.908 0.908 - - - - - - - - zgc:63568 [Source:ZFIN;Acc:ZDB-GENE-040426-1165]
13. zgc:110130 ENSDARG00000039203 352 0.9 0.900 - - - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
14. wu:fc28f08 wu:fc28f08 188 0.9 0.900 - - - - - - - -
15. ANKLE1 ANKLE1 346 0.891 0.891 - - - - - - - -
16. ttc33 ENSDARG00000035406, ENSDARG00000111770 82 0.888 0.888 - - - - - - - - tetratricopeptide repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040718-480]
17. HTR7 17 0.887 0.887 - - - - - - - - 5-hydroxytryptamine receptor 7
18. CR925758.1 CR925758.1 83 0.881 0.881 - - - - - - - -
19. wdr54 ENSDARG00000010248 245 0.88 0.880 - - - - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
20. lrmp ENSDARG00000045574 26 0.877 0.877 - - - - - - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
21. ZP2_2 ZP2_2 28 0.877 0.877 - - - - - - - -
22. as3mt ENSDARG00000027572 187 0.877 0.877 - - - - - - - - arsenite methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060312-15]
23. CU104716.2 CU104716.2 10 0.877 0.877 - - - - - - - -
24. socs7_2 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 66 0.877 0.877 - - - - - - - - suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
25. dvl3a ENSDARG00000015707 1132 0.871 - 0.871 - - - - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
26. TNFRSF14 TNFRSF14 330 0.871 0.871 - - - - - - - -
27. rdh8b ENSDARG00000105060 183 0.868 0.868 - - - - - - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
28. sema6dl ENSDARG00000011533 319 0.868 0.868 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like [Source:ZFIN;Acc:ZDB-GENE-050417-171]
29. cept1b ENSDARG00000021177 675 0.868 - 0.868 - - - - - - - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
30. si:ch211-222k6.3 ENSDARG00000071578 127 0.868 0.868 - - - - - - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
31. smu1 smu1 982 0.867 0.867 - - - - - - - -
32. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 0.866 - 0.866 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
33. TMEM116 TMEM116 96 0.866 0.866 - - - - - - - -
34. dscc1 ENSDARG00000019907 720 0.865 0.865 - - - - - - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
35. NUDT8 ENSDARG00000007722 329 0.865 0.865 - - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
36. me2 ENSDARG00000100718, ENSDARG00000114435 138 0.865 - - - - - - 0.865 - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
37. si:dkey-231k6.4 si:dkey-231k6.4 72 0.86 0.860 - - - - - - - -
38. trappc9 ENSDARG00000103106 460 0.86 0.860 - - - - - - - - trafficking protein particle complex 9 [Source:ZFIN;Acc:ZDB-GENE-070705-261]
39. atad1a ENSDARG00000023267 155 0.86 0.860 - - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
40. smad6a ENSDARG00000053209, ENSDARG00000110519 779 0.859 0.859 - - - - - - - - SMAD family member 6a [Source:ZFIN;Acc:ZDB-GENE-011015-1]
41. CR762484.2 CR762484.2 42 0.858 0.858 - - - - - - - -
42. pot1 ENSDARG00000079915 42 0.857 0.857 - - - - - - - - protection of telomeres 1 homolog [Source:ZFIN;Acc:ZDB-GENE-110324-1]
43. dnph1 ENSDARG00000075730 403 0.856 0.856 - - - - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
44. grk5l ENSDARG00000078815 222 0.856 - 0.856 - - - - - - - G protein-coupled receptor kinase 5 like [Source:ZFIN;Acc:ZDB-GENE-081105-95]
45. ENSDARG00000088164 ENSDARG00000088164 59 0.855 0.855 - - - - - - - -
46. CU138503.3 CU138503.3 31 0.853 0.853 - - - - - - - -
47. C16H8orf76 C16H8orf76 329 0.852 - 0.852 - - - - - - -
48. nkain4 ENSDARG00000062699 377 0.85 0.850 - - - - - - - - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
49. slc6a6a ENSDARG00000012534 183 0.85 0.850 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
50. DUSP18 DUSP18 117 0.849 0.849 - - - - - - - -
51. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.849 0.849 - - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
52. si:dkey-20i10.7 ENSDARG00000075269 133 0.848 0.848 - - - - - - - - si:dkey-20i10.7 [Source:ZFIN;Acc:ZDB-GENE-090313-232]
53. fancc ENSDARG00000055232, ENSDARG00000116499 50 0.848 0.848 - - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
54. fybb ENSDARG00000044694 136 0.848 0.848 - - - - - - - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
55. cldn17 ENSDARG00000099950 14 0.848 0.848 - - - - - - - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
56. CCHCR1 CCHCR1 238 0.848 0.848 - - - - - - - -
57. ca9 ENSDARG00000102300 193 0.848 0.848 - - - - - - - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
58. six4.3 six4.3 492 0.848 0.848 - - - - - - - -
59. TMEM98 ENSDARG00000059743 214 0.847 0.847 - - - - - - - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
60. EGR4_1 EGR4_1 14 0.847 0.847 - - - - - - - -
61. mfsd4a mfsd4a 179 0.847 0.847 - - - - - - - -
62. myhb ENSDARG00000001993 11 0.847 0.847 - - - - - - - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
63. mirlet7a-6 15 0.847 0.847 - - - - - - - - microRNA let7a-6
64. ctslb_1 ENSDARG00000039173, ENSDARG00000074306 486 0.847 0.847 - - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
65. comtd1 ENSDARG00000078918 238 0.847 0.847 - - - - - - - - catechol-O-methyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1072]
66. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.847 0.847 - - - - - - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
67. zgc:136791 97 0.847 0.847 - - - - - - - - zgc:136791, transcript variant X3
68. ENSDARG00000039608 ENSDARG00000039608 23 0.847 0.847 - - - - - - - -
69. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 0.847 0.847 - - - - - - - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
70. CABZ01099881.1 CABZ01099881.1 4 0.847 0.847 - - - - - - - -
71. AC024175.9 AC024175.9 56 0.847 0.847 - - - - - - - -
72. CR762484.3 CR762484.3 395 0.847 0.847 - - - - - - - -
73. lipea ENSDARG00000063037 157 0.846 0.846 - - - - - - - - lipase, hormone-sensitive a [Source:ZFIN;Acc:ZDB-GENE-060503-734]
74. CINP ENSDARG00000073910, ENSDARG00000111466 452 0.846 0.846 - - - - - - - - cyclin-dependent kinase 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050506-72]
75. CCDC132 CCDC132 267 0.846 0.846 - - - - - - - -
76. BX649494.1 BX649494.1 195 0.845 0.845 - - - - - - - -
77. GRAMD2 GRAMD2 300 0.844 - - - - - 0.844 - - -
78. si:dkey-9i23.15 ENSDARG00000093997 544 0.842 0.842 - - - - - - - - si:dkey-9i23.15 [Source:ZFIN;Acc:ZDB-GENE-090313-361]
79. col6a2 ENSDARG00000061436 5063 0.842 0.842 - - - - - - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
80. zgc:173548 ENSDARG00000070048 558 0.839 0.839 - - - - - - - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
81. tbrg1 ENSDARG00000074996 733 0.839 0.839 - - - - - - - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
82. DOCK1 ENSDARG00000099093 21 0.838 0.838 - - - - - - - - dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5]
83. pex6 ENSDARG00000070958 323 0.837 0.837 - - - - - - - - peroxisomal biogenesis factor 6 [Source:ZFIN;Acc:ZDB-GENE-081104-252]
84. trim37 ENSDARG00000076473 115 0.836 0.836 - - - - - - - - tripartite motif containing 37 [Source:ZFIN;Acc:ZDB-GENE-030131-2957]
85. dis3l ENSDARG00000053200, ENSDARG00000112358 267 0.835 - 0.835 - - - - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
86. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.834 0.834 - - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
87. C5H9orf78 C5H9orf78 1550 0.834 0.834 - - - - - - - -
88. SRR SRR 544 0.834 0.834 - - - - - - - -
89. stx8 ENSDARG00000103173 180 0.834 0.834 - - - - - - - - syntaxin 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1360]
90. papolg ENSDARG00000012141 1445 0.832 - 0.832 - - - - - - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
91. si:ch211-224l10.4 ENSDARG00000088762 36 0.832 0.832 - - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
92. ZBTB22 ZBTB22 1053 0.828 0.828 - - - - - - - -
93. fgfr1op2 ENSDARG00000009657 904 0.827 - - - - - 0.827 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
94. STON1 368 0.827 0.827 - - - - - - - - stonin 1
95. BX511227.1 ENSDARG00000102499 111 0.827 0.827 - - - - - - - -
96. hmga1b ENSDARG00000070951 377 0.827 0.827 - - - - - - - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
97. zgc:111868 ENSDARG00000099060 68 0.826 0.826 - - - - - - - - zgc:111868 [Source:ZFIN;Acc:ZDB-GENE-050809-138]
98. ARHGAP32 ARHGAP32 670 0.826 - - - - - 0.826 - - -
99. C12H17orf89 C12H17orf89 474 0.826 - 0.826 - - - - - - -
100. OMA1 ENSDARG00000090503 19 0.826 0.826 - - - - - - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]

There are 554 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA