Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STRADB

Gene Name Gene ID Reads Annotation
STRADB ENSGALG00000008373 10 STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]











Genes with expression patterns similar to STRADB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STRADB ENSGALG00000008373 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
2. DRG11 DRG11 32 2 - - - - - - 1.000 1.000 - -
3. SLC44A1 ENSGALG00000015439 32 1.981 - - - - - - 1.000 0.981 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
4. CAPN2 ENSGALG00000009360 8 1 - - - - 1.000 - - - - - calpain 2 [Source:NCBI gene;Acc:395963]
5. FGF8 ENSGALG00000007706 32 1 - - - - 1.000 - - - - - fibroblast growth factor 8 [Source:NCBI gene;Acc:396313]
6. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
7. CPLX1 ENSGALG00000015332 55 1 - - - - 1.000 - - - - - complexin 1 [Source:HGNC Symbol;Acc:HGNC:2309]
8. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
9. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
10. STEAP4 ENSGALG00000008997 8 1 - - - - - - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
11. SULT1B ENSGALG00000023122 7 1 - - - - - - 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
12. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
13. SNCB ENSGALG00000021542 19 1 - - - - - - 1.000 - - - synuclein beta [Source:NCBI gene;Acc:395391]
14. STK38 ENSGALG00000000523 44 1 - - - - - - - 1.000 - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
15. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
16. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
17. KCTD15 ENSGALG00000004907 8 1 - - - - 1.000 - - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
18. PTPRD ENSGALG00000015058 37 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
19. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
20. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
21. DMB1 ENSGALG00000000162 7 1 - - - - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
22. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
23. FBXO15 ENSGALG00000013720 4 1 - - - - 1.000 - - - - - F-box protein 15 [Source:HGNC Symbol;Acc:HGNC:13617]
24. ENSGALG00000006308 ENSGALG00000006308 1 1 - - - - 1.000 - - - - -
25. DEPTOR ENSGALG00000005790 6 1 - - - - 1.000 - - - - - DEP domain containing MTOR-interacting protein
26. ENSGALG00000023694 ENSGALG00000023694 45 1 - - - - 1.000 - - - - -
27. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
28. MAP2K1 ENSGALG00000007687 250 1 - - - - - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
29. HOXB13 ENSGALG00000033154 71 1 - - - - - - 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
30. DOCK4 ENSGALG00000009480 61 1 - - - - 1.000 - - - - - dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]
31. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
32. CDH20 ENSGALG00000012906 2 1 - - - - - - 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
33. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
34. BAI3 BAI3 106 1 - - - - - - - 1.000 - -
35. PCDHA11 58 1 - - - - - - 1.000 - - - protocadherin alpha 11
36. CATHL1 ENSGALG00000027973 98 1 - - - - - - - 1.000 - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
37. PIK3R4 ENSGALG00000040917 10 1 - - - - - - 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
38. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
39. SASH1 ENSGALG00000012342 28 1 - - - - - - - 1.000 - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
40. QRSL1 ENSGALG00000015338 16 1 - - - - 1.000 - - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
41. SORL1 ENSGALG00000006598 39 1 - - - - - - - 1.000 - - sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
42. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
43. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
44. SNAP23 ENSGALG00000009097 36 1 - - - - 1.000 - - - - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
45. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
46. GPCPD1 ENSGALG00000009130 24 1 - - - - - - - 1.000 - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
47. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
48. ACOT2L ENSGALG00000023243 3 1 - - - - 1.000 - - - - - acyl-coenzyme A thioesterase 2, mitochondrial-like
49. ENSGALG00000005873 ENSGALG00000005873 1 1 - - - - 1.000 - - - - -
50. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
51. SLC35A5 11 1 - - - - 1.000 - - - - - solute carrier family 35 member A5, transcript variant X6
52. MYNN ENSGALG00000009409 11 1 - - - - - - 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
53. PCOLCE2 ENSGALG00000002623 8 1 - - - - 1.000 - - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
54. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
55. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
56. CLCNKB ENSGALG00000003713 27 1 - - - - - - 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
57. MMR1L3 ENSGALG00000008638 26 1 - - - - 1.000 - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
58. KLHL8 ENSGALG00000011017 3 1 - - - - 1.000 - - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
59. PLCE1 ENSGALG00000039528 151 0.996 - - - - - - - 0.996 - - phospholipase C epsilon 1
60. DYDC1 ENSGALG00000002432 54 0.981 - - - - - - - 0.981 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
61. CR1L ENSGALG00000023950 98 0.981 - - - - - - - 0.981 - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
62. GTF2E1L ENSGALG00000013600 4 0.981 - - - - - - - 0.981 - - general transcription factor IIE subunit 1-like
63. TM6SF2 ENSGALG00000029015 109 0.981 - - - - - - - 0.981 - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
64. SOS2 ENSGALG00000012273 41 0.981 - - - - - - - 0.981 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
65. TVB TVB 11 0.981 - - - - - - - 0.981 - -
66. ANKFY1 ENSGALG00000001467 21 0.981 - - - - - - - 0.981 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
67. ANKRD42 8 0.981 - - - - - - - 0.981 - - ankyrin repeat domain 42
68. SLC1A2 ENSGALG00000037556 22 0.981 - - - - - - - 0.981 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
69. PLCH2 ENSGALG00000001207 7 0.981 - - - - - - - 0.981 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
70. HERPUD1 ENSGALG00000001220 18 0.981 - - - - - - - 0.981 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
71. VSNL1 ENSGALG00000016464 19 0.981 - - - - - - - 0.981 - - visinin like 1 [Source:NCBI gene;Acc:396189]
72. UTS2 ENSGALG00000000556 0 0.981 - - - - - - - 0.981 - - urotensin 2 [Source:NCBI gene;Acc:404535]
73. SPAG8 2 0.981 - - - - - - - 0.981 - - sperm associated antigen 8, transcript variant X3
74. ENSGALG00000024369 ENSGALG00000024369 4 0.981 - - - - - - - 0.981 - -
75. GSTT1 ENSGALG00000006344 22 0.981 - - - - - - - 0.981 - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
76. ITM2B ENSGALG00000016996 1112 0.981 - - - - - - - 0.981 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
77. NR4A3 ENSGALG00000013568 1 0.981 - - - - - - - 0.981 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
78. PREX1 ENSGALG00000004621 48 0.981 - - - - - - - 0.981 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
79. CAMK2A ENSGALG00000005621 3 0.981 - - - - - - - 0.981 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
80. gga-mir-99a ENSGALG00000018242 192 0.981 - - - - - - - 0.981 - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
81. ENSGALG00000026578 ENSGALG00000026578 4 0.981 - - - - - - - 0.981 - -
82. ENSGALG00000005026 ENSGALG00000005026 9 0.981 - - - - - - - 0.981 - -
83. ATP6V1H ENSGALG00000013621 13 0.981 - - - - - - - 0.981 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
84. PROZ ENSGALG00000016832 6 0.981 - - - - - - - 0.981 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
85. GRIA4 ENSGALG00000038995 29 0.981 - - - - - - - 0.981 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
86. HMGCS2 ENSGALG00000002960 54 0.981 - - - - - - - 0.981 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
87. HOPX ENSGALG00000011404 10 0.981 - - - - - - - 0.981 - - HOP homeobox [Source:NCBI gene;Acc:395241]
88. LZTS2 ENSGALG00000023612 9 0.981 - - - - - - - 0.981 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
89. SLCO2A1 ENSGALG00000006471 18 0.981 - - - - - - - 0.981 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
90. HPDL ENSGALG00000023348 1 0.981 - - - - - - - 0.981 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
91. MIS18A ENSGALG00000015884 25 0.981 - - - - - - - 0.981 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
92. IL2RB ENSGALG00000012472 7 0.981 - - - - - - - 0.981 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
93. ST3GAL2 ENSGALG00000002651 20 0.981 - - - - - - - 0.981 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
94. SLC10A4 ENSGALG00000033908 300 0.981 - - - - - - - 0.981 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
95. FAM166A ENSGALG00000045172 0 0.981 - - - - - - - 0.981 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
96. MYRFL ENSGALG00000019352 2 0.981 - - - - - - - 0.981 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
97. SVOPL ENSGALG00000012812 27 0.981 - - - - - - - 0.981 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
98. GAL4 GAL4 2 0.981 - - - - - - - 0.981 - -
99. CCR5 ENSGALG00000037077 23 0.981 - - - - - - - 0.981 - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
100. REEP1 ENSGALG00000015786 7 0.981 - - - - - - - 0.981 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]

There are 158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA