Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for STRADA

Gene Name Gene ID Reads Annotation
STRADA ENSGALG00000000550 6912 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]











Genes with expression patterns similar to STRADA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. STRADA ENSGALG00000000550 6912 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
2. MRPL50 ENSGALG00000015543 11649 2.502 - - - - - - 0.774 0.789 - 0.939 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
3. PPFIA1 ENSGALG00000035774 5258 2.435 - - - - - - 0.722 0.783 - 0.930 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
4. RCN2 ENSGALG00000039284 17848 2.174 - - 0.702 - - - 0.724 0.748 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
5. SPTSSA ENSGALG00000025755 3361 1.732 - - - - - - - 0.789 - 0.943 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
6. ATG16L1 ENSGALG00000001619 3562 1.689 - - - - - - 0.788 - - 0.901 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
7. SMC4 ENSGALG00000009553 15715 1.685 - - - - - - 0.771 - - 0.914 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
8. MAN2A1 ENSGALG00000000255 4543 1.682 - - - - - - 0.754 - - 0.928 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
9. CRYM ENSGALG00000002484 3558 1.654 - - - - - - - 0.702 - 0.952 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
10. FANCL ENSGALG00000030022 7423 1.65 - - - - - - 0.755 - - 0.895 FA complementation group L [Source:NCBI gene;Acc:421202]
11. LY6E ENSGALG00000041621 16227 1.642 - - - - - - 0.788 - - 0.854 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
12. FBXO5 ENSGALG00000013607 6156 1.619 - - - - - - 0.745 - - 0.874 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
13. BZW2 ENSGALG00000010809 29213 1.614 - - - - - - - 0.743 - 0.871 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
14. SLC12A4 ENSGALG00000034179 5674 1.614 - - - - - - - 0.736 - 0.878 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
15. RPF2 ENSGALG00000037087 12788 1.604 - - - - - - 0.847 - - 0.757 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
16. GTF2F2 ENSGALG00000016974 7524 1.602 - - - - - - 0.762 - - 0.840 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
17. GPR162 ENSGALG00000022926 7181 1.597 - - - - - - - 0.762 - 0.835 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
18. ENSGALG00000014171 ENSGALG00000014171 10383 1.591 - - - - - - 0.704 - - 0.887
19. RAB5C ENSGALG00000003359 5597 1.584 - - - - - - - 0.719 - 0.865 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
20. DGCR2 ENSGALG00000005891 8405 1.57 - - - - - - 0.717 - - 0.853 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
21. LSM6 ENSGALG00000009985 18582 1.565 - - - - - - 0.768 - - 0.797 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
22. EBNA1BP2 ENSGALG00000009045 17453 1.556 - - - - - - 0.768 - - 0.788 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
23. CPD ENSGALG00000004295 8199 1.553 - - - - - - 0.725 - - 0.828 carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
24. NCOR1 ENSGALG00000004477 4534 1.55 - - - - - - - 0.709 - 0.841 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
25. PWP1 ENSGALG00000012631 10536 1.545 - - - - - - - 0.714 - 0.831 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
26. CSRP2BP CSRP2BP 4679 1.537 - - - - - - 0.738 - - 0.799
27. HSPA4 ENSGALG00000040882 20966 1.531 - - - - - - 0.728 - - 0.803 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
28. NOC4L ENSGALG00000002272 9644 1.53 - - - - - - 0.762 - - 0.768 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
29. RIOK2 ENSGALG00000015288 6280 1.529 - - - - - - 0.769 0.760 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
30. SLC25A13 ENSGALG00000009728 8858 1.528 - - - - - - 0.739 - - 0.789 solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
31. CDCA7 ENSGALG00000040833 7484 1.519 - - - - - - 0.732 - - 0.787 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
32. BSG ENSGALG00000001328 37947 1.51 - - - - - - 0.754 - - 0.756 basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
33. MLX ENSGALG00000003199 5286 1.499 - - - - - - 0.722 - - 0.777 MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
34. BNIP3L ENSGALG00000043405 10316 1.498 - - - - - - 0.762 0.736 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
35. CCNDBP1 ENSGALG00000004837 11520 1.494 - - - - - - 0.735 0.759 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
36. CPSF3L CPSF3L 3584 1.488 - - - - - - 0.715 0.773 - -
37. SDF4 ENSGALG00000001872 6382 1.481 - - - - - - - 0.747 - 0.734 stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
38. SPCS1 ENSGALG00000001655 7718 1.478 - - - - - - 0.773 0.705 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
39. RRP7A ENSGALG00000011866 7718 1.471 - - - - - - 0.728 0.743 - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
40. NDUFA12 ENSGALG00000011325 19807 1.469 - - - - - - 0.761 0.708 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
41. SRBD1 ENSGALG00000009990 4568 1.467 - - - - - - 0.766 0.701 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
42. LGALS1 ENSGALG00000012420 13993 1.463 - - - - - - 0.738 - - 0.725 galectin 1 [Source:NCBI gene;Acc:396491]
43. PSPC1 ENSGALG00000017142 13036 1.463 - - - - - - 0.713 - - 0.750 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
44. GPR161 ENSGALG00000015247 3473 1.46 - - - - - - 0.702 0.758 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
45. GPBP1 ENSGALG00000014724 5454 1.455 - - - - - - 0.737 - - 0.718 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
46. BCL9 ENSGALG00000037655 4620 1.443 - - - - - - - 0.704 - 0.739 B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
47. NAA20 ENSGALG00000012587 11349 1.435 - - - - - - 0.716 0.719 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
48. POLR2B ENSGALG00000011387 4864 1.434 - - - - - - 0.703 - - 0.731 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
49. NUP85 ENSGALG00000007974 21249 1.43 - - - - - - 0.707 0.723 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
50. DDX10 ENSGALG00000017156 5657 1.429 - - - - - - 0.715 0.714 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
51. CYB5R2 ENSGALG00000032372 7967 1.421 - - - - - - 0.716 - - 0.705 cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
52. HCCS ENSGALG00000005571 4939 1.418 - - - - - - 0.715 0.703 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
53. SLC25A17 ENSGALG00000012013 13948 1.415 - - - - - - 0.710 0.705 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
54. GRAMD4 ENSGALG00000034274 3826 1.412 - - - - - - - 0.709 - 0.703 GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
55. HOTAIRM1 HOTAIRM1 4335 0.971 - - - - - - - - - 0.971
56. AGGF1 ENSGALG00000004311 3011 0.965 - - - - - - - - - 0.965 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
57. NARS ENSGALG00000040506 9506 0.964 - - - - - - - - - 0.964 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
58. CP ENSGALG00000030773 119 0.964 - - - - - - - - - 0.964 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
59. APBA3 ENSGALG00000000740 1249 0.964 - - - - - - - - - 0.964 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
60. PROM1 ENSGALG00000014496 2494 0.962 - - - - - - - - - 0.962 prominin 1 [Source:NCBI gene;Acc:422825]
61. MAN1A2 451 0.962 - - - - - - - - - 0.962 mannosidase alpha class 1A member 2
62. 5 5 4209 0.961 - - - - - - - - - 0.961
63. FASTKD3 ENSGALG00000033521 1186 0.96 - - - - - - - - - 0.960 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
64. MYOCD ENSGALG00000001021 351 0.96 - - - - - - - - - 0.960 myocardin [Source:NCBI gene;Acc:427790]
65. IL10R2 IL10R2 72 0.959 - - - - - - - - - 0.959
66. FAM190B FAM190B 165 0.958 - - - - - - - - - 0.958
67. CPNE2 ENSGALG00000001316 236 0.958 - - - - - - - - - 0.958 copine 2 [Source:NCBI gene;Acc:415646]
68. TMEM128 ENSGALG00000014992 6567 0.958 - - - - - - - - - 0.958 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
69. 5S_2 5S_2 58 0.958 - - - - - - - - - 0.958
70. BRD1 ENSGALG00000029379 6047 0.957 - - - - - - - - - 0.957 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
71. QKI ENSGALG00000011555 1275 0.957 - - - - - - - - - 0.957 QKI, KH domain containing RNA binding [Source:NCBI gene;Acc:374204]
72. AGPS ENSGALG00000009236 2250 0.957 - - - - - - - - - 0.957 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
73. SOX6 ENSGALG00000006074 102 0.957 - - - - - - - - - 0.957 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
74. CXADR ENSGALG00000015701 96 0.957 - - - - - - - - - 0.957 coxsackie virus and adenovirus receptor, transcript variant X2
75. HAUS8 ENSGALG00000003727 351 0.956 - - - - - - - - - 0.956 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
76. PM20D2 ENSGALG00000015779 1301 0.956 - - - - - - - - - 0.956 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
77. ZNF6 ZNF6 138 0.956 - - - - - - - - - 0.956
78. MB21D1 2460 0.956 - - - - - - - - - 0.956 Mab-21 domain containing 1
79. MTSS1 ENSGALG00000041969 1312 0.955 - - - - - - - - - 0.955 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
80. TXNDC11 ENSGALG00000003154 2224 0.955 - - - - - - - - - 0.955 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
81. ENSGALG00000009044 ENSGALG00000009044 14492 0.955 - - - - - - - - - 0.955
82. CPSF2 ENSGALG00000010783 5236 0.955 - - - - - - - - - 0.955 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
83. MSI1 ENSGALG00000007227 2279 0.955 - - - - - - - - - 0.955 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
84. RSPO2 ENSGALG00000030030 1271 0.955 - - - - - - - - - 0.955 R-spondin 2 [Source:NCBI gene;Acc:420271]
85. DCAF5 ENSGALG00000009463 1297 0.953 - - - - - - - - - 0.953 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
86. ACADL ENSGALG00000002891 8058 0.953 - - - - - - - - - 0.953 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
87. TPX2 ENSGALG00000006267 26087 0.953 - - - - - - - - - 0.953 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
88. PLA2G15 ENSGALG00000041787 762 0.953 - - - - - - - - - 0.953 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
89. PDPN ENSGALG00000030096 647 0.953 - - - - - - - - - 0.953 podoplanin, transcript variant X4
90. SSH1 ENSGALG00000004928 222 0.952 - - - - - - - - - 0.952 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
91. FRMD3 ENSGALG00000012577 999 0.952 - - - - - - - - - 0.952 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
92. AURKA ENSGALG00000007768 793 0.952 - - - - - - - - - 0.952 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
93. PCLO 249 0.952 - - - - - - - - - 0.952 piccolo presynaptic cytomatrix protein
94. MTERFD1 MTERFD1 3640 0.951 - - - - - - - - - 0.951
95. ARHGAP21 ENSGALG00000007721 3961 0.951 - - - - - - - - - 0.951 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
96. ITGA9 ENSGALG00000029378 415 0.951 - - - - - - - - - 0.951 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
97. CNTRL ENSGALG00000001513 1773 0.951 - - - - - - - - - 0.951 centriolin [Source:NCBI gene;Acc:417121]
98. ITSN2 ENSGALG00000016504 651 0.951 - - - - - - - - - 0.951 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
99. CETN1 ENSGALG00000026741 7243 0.95 - - - - - - - - - 0.950 centrin 1 [Source:NCBI gene;Acc:422668]
100. SMARCC1 ENSGALG00000032642 4842 0.95 - - - - - - - - - 0.950 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]

There are 869 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA